RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 CTTNBP2Q8WZ74 1663 aa29.97■■■□□ 2.39
PRDM2-209ENST00000491134 SHROOM2Q13796 1616 aa29.89■■■□□ 2.38
PRDM2-209ENST00000491134 IQGAP2Q13576 1575 aa29.88■■■□□ 2.37
PRDM2-209ENST00000491134 EHMT2Q96KQ7 1210 aa29.83■■■□□ 2.37
PRDM2-209ENST00000491134 UGGT2Q9NYU1 1516 aa29.78■■■□□ 2.36
PRDM2-209ENST00000491134 LOC105371045A0A1W2PR82 267 aa29.78■■■□□ 2.36
PRDM2-209ENST00000491134 UBTFP17480 764 aaKnown RBP29.78■■■□□ 2.36
PRDM2-209ENST00000491134 JPH4Q96JJ6 628 aa29.78■■■□□ 2.36
PRDM2-209ENST00000491134 TNIKQ9UKE5 1360 aa29.76■■■□□ 2.35
PRDM2-209ENST00000491134 ERCC6L2Q5T890 1561 aa29.69■■■□□ 2.34
PRDM2-209ENST00000491134 DNAJC5Q9H3Z4 198 aa29.69■■■□□ 2.34
PRDM2-209ENST00000491134 DISP1Q96F81 1524 aa29.68■■■□□ 2.34
PRDM2-209ENST00000491134 PRG4Q92954 1404 aaPredicted RBP29.68■■■□□ 2.34
PRDM2-209ENST00000491134 ARHGEF11O15085 1522 aa29.66■■■□□ 2.34
PRDM2-209ENST00000491134 SAMD9Q5K651 1589 aa29.64■■■□□ 2.33
PRDM2-209ENST00000491134 RIMBP3CA6NJZ7 1639 aa29.62■■■□□ 2.33
PRDM2-209ENST00000491134 RIMBP3BA6NNM3 1639 aa29.62■■■□□ 2.33
PRDM2-209ENST00000491134 RIMBP3Q9UFD9 1639 aa29.62■■■□□ 2.33
PRDM2-209ENST00000491134 KIAA0556O60303 1618 aa29.6■■■□□ 2.33
PRDM2-209ENST00000491134 EFCAB5A4FU69 1503 aa29.55■■■□□ 2.32
PRDM2-209ENST00000491134 CARMIL2Q6F5E8 1435 aa29.55■■■□□ 2.32
PRDM2-209ENST00000491134 ARHGAP35Q9NRY4 1499 aa29.52■■■□□ 2.32
PRDM2-209ENST00000491134 CEP162Q5TB80 1403 aa29.49■■■□□ 2.31
PRDM2-209ENST00000491134 ARAP1Q96P48 1450 aa29.48■■■□□ 2.31
PRDM2-209ENST00000491134 RANGAP1P46060 587 aaPredicted RBP29.48■■■□□ 2.31
PRDM2-209ENST00000491134 CLIP1P30622 1438 aa29.46■■■□□ 2.31
PRDM2-209ENST00000491134 FHOD3Q2V2M9 1422 aa29.41■■■□□ 2.3
PRDM2-209ENST00000491134 P3H3Q8IVL6 736 aa29.4■■■□□ 2.3
PRDM2-209ENST00000491134 PTPRGP23470 1445 aa29.38■■■□□ 2.29
PRDM2-209ENST00000491134 ABCA8O94911 1581 aa29.27■■■□□ 2.28
PRDM2-209ENST00000491134 CYB5RLQ6IPT4 315 aa29.27■■■□□ 2.28
PRDM2-209ENST00000491134 PLB1Q6P1J6 1458 aa29.25■■■□□ 2.27
PRDM2-209ENST00000491134 FMN1Q68DA7 1419 aa29.24■■■□□ 2.27
PRDM2-209ENST00000491134 ADCY10Q96PN6 1610 aa29.23■■■□□ 2.27
PRDM2-209ENST00000491134 UHRF1BP1LA0JNW5 1464 aa29.23■■■□□ 2.27
PRDM2-209ENST00000491134 TTBK1Q5TCY1 1321 aaPredicted RBP29.22■■■□□ 2.27
PRDM2-209ENST00000491134 UACAQ9BZF9 1416 aa29.22■■■□□ 2.27
PRDM2-209ENST00000491134 RAPGEF6Q8TEU7 1601 aa29.2■■■□□ 2.26
PRDM2-209ENST00000491134 ABCC2Q92887 1545 aa29.2■■■□□ 2.26
PRDM2-209ENST00000491134 PCF11O94913 1555 aaKnown RBP29.13■■■□□ 2.25
PRDM2-209ENST00000491134 CASKIN1Q8WXD9 1431 aa29.11■■■□□ 2.25
PRDM2-209ENST00000491134 NUP153P49790 1475 aaKnown RBP29.11■■■□□ 2.25
PRDM2-209ENST00000491134 VPS8Q8N3P4 1428 aa29.11■■■□□ 2.25
PRDM2-209ENST00000491134 KDM5BQ9UGL1 1544 aa29.08■■■□□ 2.25
PRDM2-209ENST00000491134 FYCO1Q9BQS8 1478 aa29.07■■■□□ 2.24
PRDM2-209ENST00000491134 LRRIQ1Q96JM4 1722 aa29.06■■■□□ 2.24
PRDM2-209ENST00000491134 HECW1Q76N89 1606 aa29.05■■■□□ 2.24
PRDM2-209ENST00000491134 ATP10BO94823 1461 aa29.02■■■□□ 2.24
PRDM2-209ENST00000491134 ZCCHC11Q5TAX3 1644 aaKnown RBP29.02■■■□□ 2.24
PRDM2-209ENST00000491134 EPRSP07814 1512 aaKnown RBP28.99■■■□□ 2.23
PRDM2-209ENST00000491134 CDK13Q14004 1512 aaKnown RBP28.94■■■□□ 2.22
PRDM2-209ENST00000491134 MAPKBP1O60336 1514 aa28.91■■■□□ 2.22
PRDM2-209ENST00000491134 CCDC18Q5T9S5 1454 aa28.91■■■□□ 2.22
PRDM2-209ENST00000491134 ARID3CA6NKF2 412 aa28.89■■■□□ 2.22
PRDM2-209ENST00000491134 ATP1B4Q9UN42 357 aaPredicted RBP28.88■■■□□ 2.21
PRDM2-209ENST00000491134 NPM1P06748 294 aaKnown RBP eCLIP28.87■■■□□ 2.21
PRDM2-209ENST00000491134 CFAP43Q8NDM7 1665 aa28.84■■■□□ 2.21
PRDM2-209ENST00000491134 ASXL2Q76L83 1435 aa28.84■■■□□ 2.21
PRDM2-209ENST00000491134 MAP3K1Q13233 1512 aa28.84■■■□□ 2.21
PRDM2-209ENST00000491134 TIAM1Q13009 1591 aa28.81■■■□□ 2.2
PRDM2-209ENST00000491134 MAGI3Q5TCQ9 1506 aa28.79■■■□□ 2.2
PRDM2-209ENST00000491134 WDR7Q9Y4E6 1490 aa28.78■■■□□ 2.2
PRDM2-209ENST00000491134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.74■■■□□ 2.19
PRDM2-209ENST00000491134 HNRNPUL2Q1KMD3 747 aaKnown RBP28.74■■■□□ 2.19
PRDM2-209ENST00000491134 TROQ12816 1431 aaPredicted RBP28.71■■■□□ 2.19
PRDM2-209ENST00000491134 PLEKHD1A6NEE1 506 aa28.7■■■□□ 2.18
PRDM2-209ENST00000491134 CDK11AQ9UQ88 783 aaPredicted RBP28.7■■■□□ 2.18
PRDM2-209ENST00000491134 ABCC10Q5T3U5 1492 aa28.69■■■□□ 2.18
PRDM2-209ENST00000491134 DIP2BQ9P265 1576 aa28.68■■■□□ 2.18
PRDM2-209ENST00000491134 KIF13AQ9H1H9 1805 aa28.67■■■□□ 2.18
PRDM2-209ENST00000491134 LRRC9Q6ZRR7 1453 aa28.66■■■□□ 2.18
PRDM2-209ENST00000491134 GLI2P10070 1586 aa28.65■■■□□ 2.18
PRDM2-209ENST00000491134 EHBP1L1Q8N3D4 1523 aa28.64■■■□□ 2.18
PRDM2-209ENST00000491134 KANK4Q5T7N3 995 aaPredicted RBP28.64■■■□□ 2.18
PRDM2-209ENST00000491134 KIF14Q15058 1648 aa28.63■■■□□ 2.17
PRDM2-209ENST00000491134 MTUS2Q5JR59 1369 aa28.61■■■□□ 2.17
PRDM2-209ENST00000491134 ABCA9Q8IUA7 1624 aa28.59■■■□□ 2.17
PRDM2-209ENST00000491134 APLP2Q06481 763 aa28.59■■■□□ 2.17
PRDM2-209ENST00000491134 KCNH8Q96L42 1107 aa28.59■■■□□ 2.17
PRDM2-209ENST00000491134 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.58■■■□□ 2.17
PRDM2-209ENST00000491134 TTC37Q6PGP7 1564 aa28.55■■■□□ 2.16
PRDM2-209ENST00000491134 MAP3K4Q9Y6R4 1608 aa28.54■■■□□ 2.16
PRDM2-209ENST00000491134 SUPT6HQ7KZ85 1726 aaKnown RBP28.52■■■□□ 2.16
PRDM2-209ENST00000491134 FAM69CQ0P6D2 419 aa28.52■■■□□ 2.16
PRDM2-209ENST00000491134 NCOA2Q15596 1464 aa28.48■■■□□ 2.15
PRDM2-209ENST00000491134 PPRC1Q5VV67 1664 aaKnown RBP28.46■■■□□ 2.15
PRDM2-209ENST00000491134 CDC42BPAQ5VT25 1732 aa28.44■■■□□ 2.14
PRDM2-209ENST00000491134 CD109Q6YHK3 1445 aa28.43■■■□□ 2.14
PRDM2-209ENST00000491134 MYO5CQ9NQX4 1742 aa28.43■■■□□ 2.14
PRDM2-209ENST00000491134 CDC42BPBQ9Y5S2 1711 aa28.4■■■□□ 2.14
PRDM2-209ENST00000491134 ARAP3Q8WWN8 1544 aa28.4■■■□□ 2.14
PRDM2-209ENST00000491134 GPATCH8Q9UKJ3 1502 aaKnown RBP28.4■■■□□ 2.14
PRDM2-209ENST00000491134 TRHP20396 242 aaPredicted RBP28.4■■■□□ 2.14
PRDM2-209ENST00000491134 PLCH2O75038 1416 aa28.4■■■□□ 2.14
PRDM2-209ENST00000491134 PREX2Q70Z35 1606 aa28.4■■■□□ 2.14
PRDM2-209ENST00000491134 TSPOAP1O95153 1857 aa28.39■■■□□ 2.14
PRDM2-209ENST00000491134 PPARGC1BQ86YN6 1023 aaKnown RBP28.37■■■□□ 2.13
PRDM2-209ENST00000491134 PHLDB1Q86UU1 1377 aa28.35■■■□□ 2.13
PRDM2-209ENST00000491134 CCNB3Q8WWL7 1395 aa28.35■■■□□ 2.13
PRDM2-209ENST00000491134 ITSN2Q9NZM3 1697 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms