RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 VPS8Q8N3P4 1428 aa18.56■□□□□ 0.56
FXR1-220ENST00000491062 DSG3P32926 999 aa18.52■□□□□ 0.55
FXR1-220ENST00000491062 TTBK1Q5TCY1 1321 aaPredicted RBP18.51■□□□□ 0.55
FXR1-220ENST00000491062 DIEXFQ68CQ4 756 aaKnown RBP18.5■□□□□ 0.55
FXR1-220ENST00000491062 RAPGEF2Q9Y4G8 1499 aa18.49■□□□□ 0.55
FXR1-220ENST00000491062 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
FXR1-220ENST00000491062 ERICH3Q5RHP9 1530 aa18.48■□□□□ 0.55
FXR1-220ENST00000491062 HMGXB3Q12766 1538 aa18.46■□□□□ 0.54
FXR1-220ENST00000491062 MKRN4PQ13434 485 aaPredicted RBP18.4■□□□□ 0.54
FXR1-220ENST00000491062 FKBP8Q14318 412 aa18.4■□□□□ 0.54
FXR1-220ENST00000491062 NEUROD1Q13562 356 aa18.39■□□□□ 0.53
FXR1-220ENST00000491062 PRXQ9BXM0 1461 aa18.39■□□□□ 0.53
FXR1-220ENST00000491062 ZNF316A6NFI3 1004 aaPredicted RBP18.38■□□□□ 0.53
FXR1-220ENST00000491062 CENPBP07199 599 aaPredicted RBP18.37■□□□□ 0.53
FXR1-220ENST00000491062 NCAPD3P42695 1498 aa18.35■□□□□ 0.53
FXR1-220ENST00000491062 ARAP1Q96P48 1450 aa18.32■□□□□ 0.52
FXR1-220ENST00000491062 FBLN2P98095 1184 aa18.32■□□□□ 0.52
FXR1-220ENST00000491062 CUX1P39880 1505 aa18.31■□□□□ 0.52
FXR1-220ENST00000491062 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
FXR1-220ENST00000491062 CFTRP13569 1480 aa18.24■□□□□ 0.51
FXR1-220ENST00000491062 CLSPNQ9HAW4 1339 aa18.23■□□□□ 0.51
FXR1-220ENST00000491062 KIF27Q86VH2 1401 aa18.22■□□□□ 0.51
FXR1-220ENST00000491062 ZBTB12Q9Y330 459 aaPredicted RBP18.2■□□□□ 0.5
FXR1-220ENST00000491062 GTF3C3Q9Y5Q9 886 aa18.19■□□□□ 0.5
FXR1-220ENST00000491062 RRBP1Q9P2E9 1410 aaKnown RBP18.18■□□□□ 0.5
FXR1-220ENST00000491062 CUX2O14529 1486 aa18.16■□□□□ 0.5
FXR1-220ENST00000491062 DHX57Q6P158 1386 aaKnown RBP18.14■□□□□ 0.49
FXR1-220ENST00000491062 ARHGAP35Q9NRY4 1499 aa18.11■□□□□ 0.49
FXR1-220ENST00000491062 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
FXR1-220ENST00000491062 MAP3K1Q13233 1512 aa18.07■□□□□ 0.48
FXR1-220ENST00000491062 RANGAP1P46060 587 aaPredicted RBP18.07■□□□□ 0.48
FXR1-220ENST00000491062 MIER1Q8N108 512 aa18.07■□□□□ 0.48
FXR1-220ENST00000491062 KANK4Q5T7N3 995 aaPredicted RBP18.05■□□□□ 0.48
FXR1-220ENST00000491062 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
FXR1-220ENST00000491062 CCNB3Q8WWL7 1395 aa18■□□□□ 0.47
FXR1-220ENST00000491062 TIAM1Q13009 1591 aa18■□□□□ 0.47
FXR1-220ENST00000491062 IGF1RP08069 1367 aa17.96■□□□□ 0.47
FXR1-220ENST00000491062 CFAP43Q8NDM7 1665 aa17.95■□□□□ 0.46
FXR1-220ENST00000491062 YTHDC1Q96MU7 727 aaKnown RBP17.94■□□□□ 0.46
FXR1-220ENST00000491062 CADPSQ9ULU8 1353 aa17.94■□□□□ 0.46
FXR1-220ENST00000491062 FGD5Q6ZNL6 1462 aa17.93■□□□□ 0.46
FXR1-220ENST00000491062 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
FXR1-220ENST00000491062 LRRC9Q6ZRR7 1453 aa17.88■□□□□ 0.45
FXR1-220ENST00000491062 MAPKBP1O60336 1514 aa17.87■□□□□ 0.45
FXR1-220ENST00000491062 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
FXR1-220ENST00000491062 PCF11O94913 1555 aaKnown RBP17.85■□□□□ 0.45
FXR1-220ENST00000491062 ZNF692Q9BU19 519 aaPredicted RBP17.83■□□□□ 0.44
FXR1-220ENST00000491062 RAB3GAP2Q9H2M9 1393 aa17.82■□□□□ 0.44
FXR1-220ENST00000491062 DNMBPQ6XZF7 1577 aa17.82■□□□□ 0.44
FXR1-220ENST00000491062 EFCAB5A4FU69 1503 aa17.82■□□□□ 0.44
FXR1-220ENST00000491062 CC2D2AQ9P2K1 1620 aa17.82■□□□□ 0.44
FXR1-220ENST00000491062 CUL7Q14999 1698 aa17.8■□□□□ 0.44
FXR1-220ENST00000491062 SETD5Q9C0A6 1442 aa17.79■□□□□ 0.44
FXR1-220ENST00000491062 ABCA10Q8WWZ4 1543 aa17.79■□□□□ 0.44
FXR1-220ENST00000491062 SPDYE2BA6NHP3 402 aa17.79■□□□□ 0.44
FXR1-220ENST00000491062 SPDYE6P0CI01 402 aa17.79■□□□□ 0.44
FXR1-220ENST00000491062 SPDYE2Q495Y8 402 aa17.79■□□□□ 0.44
FXR1-220ENST00000491062 FYCO1Q9BQS8 1478 aa17.78■□□□□ 0.44
FXR1-220ENST00000491062 FANCD2Q9BXW9 1451 aa17.78■□□□□ 0.44
FXR1-220ENST00000491062 AQRO60306 1485 aaKnown RBP eCLIP17.78■□□□□ 0.442e-8■■■■□ 23.5
FXR1-220ENST00000491062 CTTNBP2Q8WZ74 1663 aa17.78■□□□□ 0.44
FXR1-220ENST00000491062 PHLDB1Q86UU1 1377 aa17.77■□□□□ 0.44
FXR1-220ENST00000491062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.73■□□□□ 0.431e-6■□□□□ 8.8
FXR1-220ENST00000491062 PROM2Q8N271 834 aa17.73■□□□□ 0.43
FXR1-220ENST00000491062 WDR97A6NE52 1622 aa17.72■□□□□ 0.43
FXR1-220ENST00000491062 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
FXR1-220ENST00000491062 CASKIN1Q8WXD9 1431 aa17.71■□□□□ 0.43
FXR1-220ENST00000491062 POLA1P09884 1462 aaPredicted RBP17.7■□□□□ 0.42
FXR1-220ENST00000491062 MYT1Q01538 1121 aa17.7■□□□□ 0.42
FXR1-220ENST00000491062 SSUH2Q9Y2M2 353 aa17.69■□□□□ 0.42
FXR1-220ENST00000491062 ITGAEP38570 1179 aa17.68■□□□□ 0.42
FXR1-220ENST00000491062 FHOD3Q2V2M9 1422 aa17.66■□□□□ 0.42
FXR1-220ENST00000491062 RAD54L2Q9Y4B4 1467 aa17.66■□□□□ 0.42
FXR1-220ENST00000491062 TIMELESSQ9UNS1 1208 aa17.63■□□□□ 0.41
FXR1-220ENST00000491062 SNAPC4Q5SXM2 1469 aa17.63■□□□□ 0.41
FXR1-220ENST00000491062 SAMD9Q5K651 1589 aa17.62■□□□□ 0.41
FXR1-220ENST00000491062 FMN1Q68DA7 1419 aa17.62■□□□□ 0.41
FXR1-220ENST00000491062 ABCA5Q8WWZ7 1642 aa17.61■□□□□ 0.41
FXR1-220ENST00000491062 THOC2Q8NI27 1593 aaKnown RBP17.61■□□□□ 0.41
FXR1-220ENST00000491062 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
FXR1-220ENST00000491062 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
FXR1-220ENST00000491062 FGD6Q6ZV73 1430 aa17.58■□□□□ 0.4
FXR1-220ENST00000491062 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.4
FXR1-220ENST00000491062 SUPT16HQ9Y5B9 1047 aaKnown RBP17.57■□□□□ 0.4
FXR1-220ENST00000491062 LRRIQ1Q96JM4 1722 aa17.56■□□□□ 0.4
FXR1-220ENST00000491062 URB2Q14146 1524 aaKnown RBP17.54■□□□□ 0.4
FXR1-220ENST00000491062 RBM42Q9BTD8 480 aaKnown RBP17.54■□□□□ 0.4
FXR1-220ENST00000491062 NESP48681 1621 aa17.54■□□□□ 0.4
FXR1-220ENST00000491062 FBXO3Q9UK99 471 aa17.53■□□□□ 0.4
FXR1-220ENST00000491062 PTPN23Q9H3S7 1636 aa17.52■□□□□ 0.4
FXR1-220ENST00000491062 GRIN2BQ13224 1484 aa17.52■□□□□ 0.4
FXR1-220ENST00000491062 P3H3Q8IVL6 736 aa17.52■□□□□ 0.4
FXR1-220ENST00000491062 HFM1A2PYH4 1435 aa17.51■□□□□ 0.39
FXR1-220ENST00000491062 CCDC18Q5T9S5 1454 aa17.51■□□□□ 0.39
FXR1-220ENST00000491062 EHBP1L1Q8N3D4 1523 aa17.51■□□□□ 0.39
FXR1-220ENST00000491062 SUPT6HQ7KZ85 1726 aaKnown RBP17.5■□□□□ 0.39
FXR1-220ENST00000491062 SIN3AQ96ST3 1273 aa17.5■□□□□ 0.39
FXR1-220ENST00000491062 UACAQ9BZF9 1416 aa17.48■□□□□ 0.39
FXR1-220ENST00000491062 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
FXR1-220ENST00000491062 PPP1R15AO75807 674 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms