RNA–Protein interactions for RNA: ENST00000490552.1

USP34-218, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 1,793 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-218ENST00000490552 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
USP34-218ENST00000490552 CHMP7Q8WUX9 453 aaPredicted RBP14.93□□□□□ -0.02
USP34-218ENST00000490552 EFCAB5A4FU69 1503 aa14.89□□□□□ -0.03
USP34-218ENST00000490552 KIAA0586Q9BVV6 1533 aa14.87□□□□□ -0.03
USP34-218ENST00000490552 VPS8Q8N3P4 1428 aa14.86□□□□□ -0.03
USP34-218ENST00000490552 ARHGAP35Q9NRY4 1499 aa14.86□□□□□ -0.03
USP34-218ENST00000490552 IQGAP2Q13576 1575 aa14.85□□□□□ -0.03
USP34-218ENST00000490552 RANGAP1P46060 587 aaPredicted RBP14.85□□□□□ -0.03
USP34-218ENST00000490552 FBLN2P98095 1184 aa14.84□□□□□ -0.03
USP34-218ENST00000490552 NUP160Q12769 1436 aa14.84□□□□□ -0.03
USP34-218ENST00000490552 ARAP1Q96P48 1450 aa14.82□□□□□ -0.04
USP34-218ENST00000490552 SAMD9Q5K651 1589 aa14.79□□□□□ -0.04
USP34-218ENST00000490552 UGGT2Q9NYU1 1516 aa14.79□□□□□ -0.04
USP34-218ENST00000490552 CEP170Q5SW79 1584 aa14.78□□□□□ -0.04
USP34-218ENST00000490552 FMN1Q68DA7 1419 aa14.76□□□□□ -0.05
USP34-218ENST00000490552 APLP2Q06481 763 aa14.76□□□□□ -0.05
USP34-218ENST00000490552 CHD1O14646 1710 aa14.75□□□□□ -0.05
USP34-218ENST00000490552 FHOD3Q2V2M9 1422 aa14.72□□□□□ -0.05
USP34-218ENST00000490552 CARMIL2Q6F5E8 1435 aa14.72□□□□□ -0.05
USP34-218ENST00000490552 JPH4Q96JJ6 628 aa14.71□□□□□ -0.05
USP34-218ENST00000490552 P3H3Q8IVL6 736 aa14.7□□□□□ -0.06
USP34-218ENST00000490552 FYCO1Q9BQS8 1478 aa14.68□□□□□ -0.06
USP34-218ENST00000490552 KIAA0556O60303 1618 aa14.68□□□□□ -0.06
USP34-218ENST00000490552 CASKIN1Q8WXD9 1431 aa14.68□□□□□ -0.06
USP34-218ENST00000490552 MAP3K1Q13233 1512 aa14.68□□□□□ -0.06
USP34-218ENST00000490552 DISP1Q96F81 1524 aa14.68□□□□□ -0.06
USP34-218ENST00000490552 SHROOM2Q13796 1616 aa14.64□□□□□ -0.07
USP34-218ENST00000490552 TRIM26Q12899 539 aaPredicted RBP14.63□□□□□ -0.07
USP34-218ENST00000490552 CLASP1Q7Z460 1538 aa14.63□□□□□ -0.07
USP34-218ENST00000490552 PCF11O94913 1555 aaKnown RBP14.62□□□□□ -0.07
USP34-218ENST00000490552 PRG4Q92954 1404 aaPredicted RBP14.61□□□□□ -0.07
USP34-218ENST00000490552 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
USP34-218ENST00000490552 TIAM1Q13009 1591 aa14.59□□□□□ -0.07
USP34-218ENST00000490552 CCDC18Q5T9S5 1454 aa14.59□□□□□ -0.07
USP34-218ENST00000490552 HECW1Q76N89 1606 aa14.58□□□□□ -0.08
USP34-218ENST00000490552 CFAP43Q8NDM7 1665 aa14.56□□□□□ -0.08
USP34-218ENST00000490552 ATP1B4Q9UN42 357 aaPredicted RBP14.56□□□□□ -0.08
USP34-218ENST00000490552 PPARGC1BQ86YN6 1023 aaKnown RBP14.54□□□□□ -0.08
USP34-218ENST00000490552 PTPRGP23470 1445 aa14.54□□□□□ -0.08
USP34-218ENST00000490552 RAPGEF6Q8TEU7 1601 aa14.53□□□□□ -0.08
USP34-218ENST00000490552 LRRC9Q6ZRR7 1453 aa14.53□□□□□ -0.08
USP34-218ENST00000490552 EPRSP07814 1512 aaKnown RBP14.5□□□□□ -0.09
USP34-218ENST00000490552 KANK4Q5T7N3 995 aaPredicted RBP14.5□□□□□ -0.09
USP34-218ENST00000490552 PCGF6Q9BYE7 350 aa14.5□□□□□ -0.09
USP34-218ENST00000490552 CDK11AQ9UQ88 783 aaPredicted RBP14.49□□□□□ -0.09
USP34-218ENST00000490552 ABCA8O94911 1581 aa14.48□□□□□ -0.09
USP34-218ENST00000490552 MTUS2Q5JR59 1369 aa14.48□□□□□ -0.09
USP34-218ENST00000490552 NUP153P49790 1475 aaKnown RBP14.48□□□□□ -0.09
USP34-218ENST00000490552 PLB1Q6P1J6 1458 aa14.47□□□□□ -0.09
USP34-218ENST00000490552 TTBK1Q5TCY1 1321 aaPredicted RBP14.47□□□□□ -0.09
USP34-218ENST00000490552 EHBP1L1Q8N3D4 1523 aa14.46□□□□□ -0.09
USP34-218ENST00000490552 UACAQ9BZF9 1416 aa14.45□□□□□ -0.1
USP34-218ENST00000490552 LRRIQ1Q96JM4 1722 aa14.44□□□□□ -0.1
USP34-218ENST00000490552 ERCC6L2Q5T890 1561 aa14.43□□□□□ -0.1
USP34-218ENST00000490552 UHRF1BP1LA0JNW5 1464 aa14.42□□□□□ -0.1
USP34-218ENST00000490552 CDK13Q14004 1512 aaKnown RBP14.41□□□□□ -0.1
USP34-218ENST00000490552 ABCC2Q92887 1545 aa14.41□□□□□ -0.1
USP34-218ENST00000490552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.4□□□□□ -0.1
USP34-218ENST00000490552 HNRNPUL2Q1KMD3 747 aaKnown RBP14.4□□□□□ -0.1
USP34-218ENST00000490552 SUPT6HQ7KZ85 1726 aaKnown RBP14.4□□□□□ -0.1
USP34-218ENST00000490552 RRBP1Q9P2E9 1410 aaKnown RBP14.4□□□□□ -0.1
USP34-218ENST00000490552 ATP10BO94823 1461 aa14.37□□□□□ -0.11
USP34-218ENST00000490552 PLEKHD1A6NEE1 506 aa14.37□□□□□ -0.11
USP34-218ENST00000490552 TROQ12816 1431 aaPredicted RBP14.37□□□□□ -0.11
USP34-218ENST00000490552 NCOA2Q15596 1464 aa14.36□□□□□ -0.11
USP34-218ENST00000490552 CCNB3Q8WWL7 1395 aa14.36□□□□□ -0.11
USP34-218ENST00000490552 ARHGEF11O15085 1522 aa14.35□□□□□ -0.11
USP34-218ENST00000490552 MAGI3Q5TCQ9 1506 aa14.35□□□□□ -0.11
USP34-218ENST00000490552 PHLDB1Q86UU1 1377 aa14.35□□□□□ -0.11
USP34-218ENST00000490552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.34□□□□□ -0.11
USP34-218ENST00000490552 ARID3CA6NKF2 412 aa14.34□□□□□ -0.11
USP34-218ENST00000490552 KDM5BQ9UGL1 1544 aa14.33□□□□□ -0.12
USP34-218ENST00000490552 MYOM3Q5VTT5 1437 aa14.33□□□□□ -0.12
USP34-218ENST00000490552 ADCY10Q96PN6 1610 aa14.32□□□□□ -0.12
USP34-218ENST00000490552 MIA2Q96PC5 1412 aa14.31□□□□□ -0.12
USP34-218ENST00000490552 FGD6Q6ZV73 1430 aa14.3□□□□□ -0.12
USP34-218ENST00000490552 KIF14Q15058 1648 aa14.29□□□□□ -0.12
USP34-218ENST00000490552 ZCCHC11Q5TAX3 1644 aaKnown RBP14.26□□□□□ -0.13
USP34-218ENST00000490552 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
USP34-218ENST00000490552 ITSN2Q9NZM3 1697 aa14.24□□□□□ -0.13
USP34-218ENST00000490552 TCOF1Q13428 1488 aaKnown RBP14.23□□□□□ -0.13
USP34-218ENST00000490552 FAM50AQ14320 339 aaKnown RBP14.23□□□□□ -0.13
USP34-218ENST00000490552 ABCC10Q5T3U5 1492 aa14.22□□□□□ -0.13
USP34-218ENST00000490552 PTPN23Q9H3S7 1636 aa14.21□□□□□ -0.13
USP34-218ENST00000490552 RIMBP3CA6NJZ7 1639 aa14.21□□□□□ -0.13
USP34-218ENST00000490552 RIMBP3BA6NNM3 1639 aa14.21□□□□□ -0.13
USP34-218ENST00000490552 RIMBP3Q9UFD9 1639 aa14.21□□□□□ -0.13
USP34-218ENST00000490552 GPATCH8Q9UKJ3 1502 aaKnown RBP14.2□□□□□ -0.14
USP34-218ENST00000490552 WDR7Q9Y4E6 1490 aa14.19□□□□□ -0.14
USP34-218ENST00000490552 CFDP1Q9UEE9 299 aaPredicted RBP14.19□□□□□ -0.14
USP34-218ENST00000490552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.16□□□□□ -0.14
USP34-218ENST00000490552 ASXL2Q76L83 1435 aa14.15□□□□□ -0.14
USP34-218ENST00000490552 CYB5RLQ6IPT4 315 aa14.15□□□□□ -0.14
USP34-218ENST00000490552 CDC42BPAQ5VT25 1732 aa14.14□□□□□ -0.15
USP34-218ENST00000490552 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
USP34-218ENST00000490552 ARAP3Q8WWN8 1544 aa14.13□□□□□ -0.15
USP34-218ENST00000490552 PREX2Q70Z35 1606 aa14.13□□□□□ -0.15
USP34-218ENST00000490552 ITGAEP38570 1179 aa14.13□□□□□ -0.15
USP34-218ENST00000490552 RSPH4AQ5TD94 716 aa14.12□□□□□ -0.15
USP34-218ENST00000490552 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms