RNA–Protein interactions for RNA: ENST00000490331.2

SMIM19-205, Transcript of small integral membrane protein 19, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM19, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-205ENST00000490331 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
SMIM19-205ENST00000490331 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
SMIM19-205ENST00000490331 POLA1P09884 1462 aaPredicted RBP17.15■□□□□ 0.34
SMIM19-205ENST00000490331 CHD1O14646 1710 aa17.12■□□□□ 0.33
SMIM19-205ENST00000490331 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.32
SMIM19-205ENST00000490331 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
SMIM19-205ENST00000490331 TDRD9Q8NDG6 1382 aaKnown RBP17.05■□□□□ 0.32
SMIM19-205ENST00000490331 FBLN2P98095 1184 aa17.05■□□□□ 0.32
SMIM19-205ENST00000490331 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
SMIM19-205ENST00000490331 SOGA1O94964 1423 aa17.04■□□□□ 0.32
SMIM19-205ENST00000490331 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
SMIM19-205ENST00000490331 WDR97A6NE52 1622 aa17■□□□□ 0.31
SMIM19-205ENST00000490331 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
SMIM19-205ENST00000490331 MAGI1Q96QZ7 1491 aaPredicted RBP16.98■□□□□ 0.31
SMIM19-205ENST00000490331 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
SMIM19-205ENST00000490331 CUX1P39880 1505 aa16.95■□□□□ 0.3
SMIM19-205ENST00000490331 POLA2Q14181 598 aa16.94■□□□□ 0.3
SMIM19-205ENST00000490331 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
SMIM19-205ENST00000490331 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
SMIM19-205ENST00000490331 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
SMIM19-205ENST00000490331 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
SMIM19-205ENST00000490331 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
SMIM19-205ENST00000490331 CHRDL2Q6WN34 429 aa16.86■□□□□ 0.29
SMIM19-205ENST00000490331 GAPVD1Q14C86 1478 aa16.85■□□□□ 0.29
SMIM19-205ENST00000490331 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
SMIM19-205ENST00000490331 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
SMIM19-205ENST00000490331 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
SMIM19-205ENST00000490331 ERCC6L2Q5T890 1561 aa16.74■□□□□ 0.27
SMIM19-205ENST00000490331 NUP160Q12769 1436 aa16.74■□□□□ 0.27
SMIM19-205ENST00000490331 GRIN2AQ12879 1464 aa16.73■□□□□ 0.27
SMIM19-205ENST00000490331 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
SMIM19-205ENST00000490331 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
SMIM19-205ENST00000490331 ADAMTS12P58397 1594 aa16.67■□□□□ 0.26
SMIM19-205ENST00000490331 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
SMIM19-205ENST00000490331 SHROOM2Q13796 1616 aa16.65■□□□□ 0.26
SMIM19-205ENST00000490331 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
SMIM19-205ENST00000490331 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
SMIM19-205ENST00000490331 ERICH3Q5RHP9 1530 aa16.57■□□□□ 0.24
SMIM19-205ENST00000490331 AKT1S1Q96B36 256 aa16.57■□□□□ 0.24
SMIM19-205ENST00000490331 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
SMIM19-205ENST00000490331 BIVM-ERCC5R4GMW8 1640 aa16.55■□□□□ 0.24
SMIM19-205ENST00000490331 ZBTB12Q9Y330 459 aaPredicted RBP16.54■□□□□ 0.24
SMIM19-205ENST00000490331 PRG4Q92954 1404 aaPredicted RBP16.53■□□□□ 0.24
SMIM19-205ENST00000490331 JPH4Q96JJ6 628 aa16.51■□□□□ 0.23
SMIM19-205ENST00000490331 KIF13AQ9H1H9 1805 aa16.5■□□□□ 0.23
SMIM19-205ENST00000490331 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
SMIM19-205ENST00000490331 MAPKBP1O60336 1514 aa16.45■□□□□ 0.22
SMIM19-205ENST00000490331 SP7Q8TDD2 431 aaPredicted RBP16.44■□□□□ 0.22
SMIM19-205ENST00000490331 RUSC2Q8N2Y8 1516 aa16.44■□□□□ 0.22
SMIM19-205ENST00000490331 REM2Q8IYK8 340 aaPredicted RBP16.43■□□□□ 0.22
SMIM19-205ENST00000490331 SUPT5HO00267 1087 aaKnown RBP16.42■□□□□ 0.22
SMIM19-205ENST00000490331 FAM69CQ0P6D2 419 aa16.42■□□□□ 0.22
SMIM19-205ENST00000490331 DIP2BQ9P265 1576 aa16.39■□□□□ 0.21
SMIM19-205ENST00000490331 ZBTB22O15209 634 aa16.38■□□□□ 0.21
SMIM19-205ENST00000490331 PIP4P2Q8N4L2 257 aa16.38■□□□□ 0.21
SMIM19-205ENST00000490331 ADCY10Q96PN6 1610 aa16.37■□□□□ 0.21
SMIM19-205ENST00000490331 KDM4FA0A1W2PPD8 638 aa16.36■□□□□ 0.21
SMIM19-205ENST00000490331 KIAA0586Q9BVV6 1533 aa16.35■□□□□ 0.21
SMIM19-205ENST00000490331 IGF1RP08069 1367 aa16.34■□□□□ 0.21
SMIM19-205ENST00000490331 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.2
SMIM19-205ENST00000490331 PITPNM1O00562 1244 aa16.29■□□□□ 0.2
SMIM19-205ENST00000490331 KDM6BO15054 1643 aa16.27■□□□□ 0.19
SMIM19-205ENST00000490331 PTPRGP23470 1445 aa16.23■□□□□ 0.19
SMIM19-205ENST00000490331 KIF27Q86VH2 1401 aa16.23■□□□□ 0.19
SMIM19-205ENST00000490331 CUL7Q14999 1698 aa16.21■□□□□ 0.18
SMIM19-205ENST00000490331 ABCC2Q92887 1545 aa16.2■□□□□ 0.18
SMIM19-205ENST00000490331 HAX1O00165 279 aa16.2■□□□□ 0.18
SMIM19-205ENST00000490331 FXR2P51116 673 aaKnown RBP eCLIP16.19■□□□□ 0.18
SMIM19-205ENST00000490331 GLI2P10070 1586 aa16.18■□□□□ 0.18
SMIM19-205ENST00000490331 TNIKQ9UKE5 1360 aa16.18■□□□□ 0.18
SMIM19-205ENST00000490331 UHRF1BP1LA0JNW5 1464 aa16.17■□□□□ 0.18
SMIM19-205ENST00000490331 ASXL2Q76L83 1435 aa16.17■□□□□ 0.18
SMIM19-205ENST00000490331 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
SMIM19-205ENST00000490331 PLB1Q6P1J6 1458 aa16.16■□□□□ 0.18
SMIM19-205ENST00000490331 PPRC1Q5VV67 1664 aaKnown RBP16.15■□□□□ 0.18
SMIM19-205ENST00000490331 ATXN8OSP0DMR3 200 aa16.15■□□□□ 0.18
SMIM19-205ENST00000490331 COL17A1Q9UMD9 1497 aaPredicted RBP16.15■□□□□ 0.18
SMIM19-205ENST00000490331 CARMIL2Q6F5E8 1435 aa16.13■□□□□ 0.17
SMIM19-205ENST00000490331 TSPOAP1O95153 1857 aa16.13■□□□□ 0.17
SMIM19-205ENST00000490331 ILDR1Q86SU0 546 aaPredicted RBP16.12■□□□□ 0.17
SMIM19-205ENST00000490331 DISP1Q96F81 1524 aa16.11■□□□□ 0.17
SMIM19-205ENST00000490331 UACAQ9BZF9 1416 aa16.11■□□□□ 0.17
SMIM19-205ENST00000490331 ADGRL1O94910 1474 aa16.1■□□□□ 0.17
SMIM19-205ENST00000490331 KDM5BQ9UGL1 1544 aa16.09■□□□□ 0.17
SMIM19-205ENST00000490331 EPRSP07814 1512 aaKnown RBP16.09■□□□□ 0.17
SMIM19-205ENST00000490331 IQGAP2Q13576 1575 aa16.09■□□□□ 0.17
SMIM19-205ENST00000490331 MAP3K4Q9Y6R4 1608 aa16.05■□□□□ 0.16
SMIM19-205ENST00000490331 UGGT2Q9NYU1 1516 aa16.04■□□□□ 0.16
SMIM19-205ENST00000490331 TTBK1Q5TCY1 1321 aaPredicted RBP16.04■□□□□ 0.16
SMIM19-205ENST00000490331 TEX14Q8IWB6 1497 aa16■□□□□ 0.15
SMIM19-205ENST00000490331 SPDYE2BA6NHP3 402 aa16■□□□□ 0.15
SMIM19-205ENST00000490331 SPDYE6P0CI01 402 aa16■□□□□ 0.15
SMIM19-205ENST00000490331 SPDYE2Q495Y8 402 aa16■□□□□ 0.15
SMIM19-205ENST00000490331 ZCCHC11Q5TAX3 1644 aaKnown RBP15.97■□□□□ 0.15
SMIM19-205ENST00000490331 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
SMIM19-205ENST00000490331 EVX2Q03828 476 aa15.96■□□□□ 0.15
SMIM19-205ENST00000490331 KIAA0556O60303 1618 aa15.96■□□□□ 0.15
SMIM19-205ENST00000490331 WDR7Q9Y4E6 1490 aa15.96■□□□□ 0.14
SMIM19-205ENST00000490331 HECW2Q9P2P5 1572 aa15.95■□□□□ 0.14
SMIM19-205ENST00000490331 MAGI3Q5TCQ9 1506 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms