RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 SOCS7O14512 581 aa8□□□□□ -1.13
RTN1-207ENST00000490111 CHMP7Q8WUX9 453 aaPredicted RBP8□□□□□ -1.13
RTN1-207ENST00000490111 ABCC8Q09428 1581 aa7.99□□□□□ -1.13
RTN1-207ENST00000490111 HECW2Q9P2P5 1572 aa7.99□□□□□ -1.13
RTN1-207ENST00000490111 PRDM2Q13029 1718 aa7.98□□□□□ -1.13
RTN1-207ENST00000490111 VSIG10Q8N0Z9 540 aa7.97□□□□□ -1.13
RTN1-207ENST00000490111 SNAPC4Q5SXM2 1469 aa7.96□□□□□ -1.13
RTN1-207ENST00000490111 KDM6BO15054 1643 aa7.95□□□□□ -1.14
RTN1-207ENST00000490111 DNMBPQ6XZF7 1577 aa7.94□□□□□ -1.14
RTN1-207ENST00000490111 FAM69CQ0P6D2 419 aa7.94□□□□□ -1.14
RTN1-207ENST00000490111 HOMEZQ8IX15 550 aa7.94□□□□□ -1.14
RTN1-207ENST00000490111 TDRD9Q8NDG6 1382 aaKnown RBP7.94□□□□□ -1.14
RTN1-207ENST00000490111 ILDR2Q71H61 639 aa7.93□□□□□ -1.14
RTN1-207ENST00000490111 ADGRL1O94910 1474 aa7.92□□□□□ -1.14
RTN1-207ENST00000490111 MAGI1Q96QZ7 1491 aaPredicted RBP7.92□□□□□ -1.14
RTN1-207ENST00000490111 SYNJ2O15056 1496 aa7.91□□□□□ -1.14
RTN1-207ENST00000490111 POLA1P09884 1462 aaPredicted RBP7.91□□□□□ -1.14
RTN1-207ENST00000490111 ABCC10Q5T3U5 1492 aa7.9□□□□□ -1.14
RTN1-207ENST00000490111 RAD54L2Q9Y4B4 1467 aa7.89□□□□□ -1.15
RTN1-207ENST00000490111 SOGA1O94964 1423 aa7.88□□□□□ -1.15
RTN1-207ENST00000490111 WDR97A6NE52 1622 aa7.88□□□□□ -1.15
RTN1-207ENST00000490111 GRIN2BQ13224 1484 aa7.87□□□□□ -1.15
RTN1-207ENST00000490111 ERICH6Q7L0X2 663 aa7.87□□□□□ -1.15
RTN1-207ENST00000490111 GTF3C3Q9Y5Q9 886 aa7.87□□□□□ -1.15
RTN1-207ENST00000490111 TOP2AP11388 1531 aaKnown RBP7.87□□□□□ -1.15
RTN1-207ENST00000490111 DISP3Q9P2K9 1392 aa7.86□□□□□ -1.15
RTN1-207ENST00000490111 FOXD1Q16676 465 aa7.85□□□□□ -1.15
RTN1-207ENST00000490111 CEP170Q5SW79 1584 aa7.84□□□□□ -1.15
RTN1-207ENST00000490111 DIP2BQ9P265 1576 aa7.84□□□□□ -1.15
RTN1-207ENST00000490111 NPM1P06748 294 aaKnown RBP eCLIP7.84□□□□□ -1.15
RTN1-207ENST00000490111 TSPOAP1O95153 1857 aa7.82□□□□□ -1.16
RTN1-207ENST00000490111 MAPKBP1O60336 1514 aa7.82□□□□□ -1.16
RTN1-207ENST00000490111 CNKSR2Q8WXI2 1034 aa7.81□□□□□ -1.16
RTN1-207ENST00000490111 KDM2AQ9Y2K7 1162 aa7.81□□□□□ -1.16
RTN1-207ENST00000490111 CCDC88BA6NC98 1476 aa7.8□□□□□ -1.16
RTN1-207ENST00000490111 SHROOM2Q13796 1616 aa7.79□□□□□ -1.16
RTN1-207ENST00000490111 PBRM1Q86U86 1689 aa7.79□□□□□ -1.16
RTN1-207ENST00000490111 FGD5Q6ZNL6 1462 aa7.78□□□□□ -1.16
RTN1-207ENST00000490111 RANGAP1P46060 587 aaPredicted RBP7.77□□□□□ -1.17
RTN1-207ENST00000490111 GRIN2AQ12879 1464 aa7.76□□□□□ -1.17
RTN1-207ENST00000490111 NUP160Q12769 1436 aa7.76□□□□□ -1.17
RTN1-207ENST00000490111 TOP2BQ02880 1626 aa7.74□□□□□ -1.17
RTN1-207ENST00000490111 TMEM132AQ24JP5 1023 aa7.74□□□□□ -1.17
RTN1-207ENST00000490111 PRG4Q92954 1404 aaPredicted RBP7.74□□□□□ -1.17
RTN1-207ENST00000490111 ATXN8OSP0DMR3 200 aa7.72□□□□□ -1.17
RTN1-207ENST00000490111 ADCY10Q96PN6 1610 aa7.71□□□□□ -1.17
RTN1-207ENST00000490111 COL17A1Q9UMD9 1497 aaPredicted RBP7.71□□□□□ -1.18
RTN1-207ENST00000490111 SPATA31D1Q6ZQQ2 1576 aa7.71□□□□□ -1.18
RTN1-207ENST00000490111 PPRC1Q5VV67 1664 aaKnown RBP7.7□□□□□ -1.18
RTN1-207ENST00000490111 CERKQ8TCT0 537 aa7.7□□□□□ -1.18
RTN1-207ENST00000490111 JPH4Q96JJ6 628 aa7.7□□□□□ -1.18
RTN1-207ENST00000490111 ABCA5Q8WWZ7 1642 aa7.69□□□□□ -1.18
RTN1-207ENST00000490111 CUX1P39880 1505 aa7.67□□□□□ -1.18
RTN1-207ENST00000490111 GLI2P10070 1586 aa7.67□□□□□ -1.18
RTN1-207ENST00000490111 ADAMTS12P58397 1594 aa7.67□□□□□ -1.18
RTN1-207ENST00000490111 PODXL2Q9NZ53 605 aa7.66□□□□□ -1.18
RTN1-207ENST00000490111 C14orf37Q86TY3 774 aa7.65□□□□□ -1.18
RTN1-207ENST00000490111 ABCA10Q8WWZ4 1543 aa7.65□□□□□ -1.18
RTN1-207ENST00000490111 FHAD1B1AJZ9 1412 aa7.64□□□□□ -1.19
RTN1-207ENST00000490111 PCF11O94913 1555 aaKnown RBP7.62□□□□□ -1.19
RTN1-207ENST00000490111 PTPRMP28827 1452 aa7.62□□□□□ -1.19
RTN1-207ENST00000490111 PLB1Q6P1J6 1458 aa7.62□□□□□ -1.19
RTN1-207ENST00000490111 TEX14Q8IWB6 1497 aa7.62□□□□□ -1.19
RTN1-207ENST00000490111 ASXL2Q76L83 1435 aa7.61□□□□□ -1.19
RTN1-207ENST00000490111 MAP3K4Q9Y6R4 1608 aa7.6□□□□□ -1.19
RTN1-207ENST00000490111 PIAS4Q8N2W9 510 aaPredicted RBP7.59□□□□□ -1.19
RTN1-207ENST00000490111 KIF21BO75037 1637 aa7.58□□□□□ -1.2
RTN1-207ENST00000490111 RUSC2Q8N2Y8 1516 aa7.57□□□□□ -1.2
RTN1-207ENST00000490111 ABCC2Q92887 1545 aa7.57□□□□□ -1.2
RTN1-207ENST00000490111 BBXQ8WY36 941 aaPredicted RBP7.57□□□□□ -1.2
RTN1-207ENST00000490111 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.57□□□□□ -1.2
RTN1-207ENST00000490111 ADAMTSL3P82987 1691 aa7.57□□□□□ -1.2
RTN1-207ENST00000490111 HSPA2P54652 639 aa7.56□□□□□ -1.2
RTN1-207ENST00000490111 EPRSP07814 1512 aaKnown RBP7.56□□□□□ -1.2
RTN1-207ENST00000490111 PTPRGP23470 1445 aa7.55□□□□□ -1.2
RTN1-207ENST00000490111 PKD2Q13563 968 aa7.55□□□□□ -1.2
RTN1-207ENST00000490111 PAXIP1Q6ZW49 1069 aaPredicted RBP7.55□□□□□ -1.2
RTN1-207ENST00000490111 ERICH3Q5RHP9 1530 aa7.55□□□□□ -1.2
RTN1-207ENST00000490111 KIAA0586Q9BVV6 1533 aa7.55□□□□□ -1.2
RTN1-207ENST00000490111 CUL7Q14999 1698 aa7.54□□□□□ -1.2
RTN1-207ENST00000490111 TTBK1Q5TCY1 1321 aaPredicted RBP7.53□□□□□ -1.2
RTN1-207ENST00000490111 SLC4A2P04920 1241 aa7.53□□□□□ -1.2
RTN1-207ENST00000490111 FBXO3Q9UK99 471 aa7.53□□□□□ -1.2
RTN1-207ENST00000490111 MYCNP04198 464 aaPredicted RBP7.52□□□□□ -1.21
RTN1-207ENST00000490111 APLP2Q06481 763 aa7.52□□□□□ -1.21
RTN1-207ENST00000490111 NBR1Q14596 966 aa7.52□□□□□ -1.21
RTN1-207ENST00000490111 WRNQ14191 1432 aaPredicted RBP eCLIP7.52□□□□□ -1.21
RTN1-207ENST00000490111 KLHL34Q8N239 644 aa7.51□□□□□ -1.21
RTN1-207ENST00000490111 SCAF1Q9H7N4 1312 aaKnown RBP7.51□□□□□ -1.21
RTN1-207ENST00000490111 CFAP44Q96MT7 982 aa7.5□□□□□ -1.21
RTN1-207ENST00000490111 UHRF1BP1LA0JNW5 1464 aa7.49□□□□□ -1.21
RTN1-207ENST00000490111 MADDQ8WXG6 1647 aa7.49□□□□□ -1.21
RTN1-207ENST00000490111 TSHZ2Q9NRE2 1034 aa7.49□□□□□ -1.21
RTN1-207ENST00000490111 TNIKQ9UKE5 1360 aa7.48□□□□□ -1.21
RTN1-207ENST00000490111 MAGI3Q5TCQ9 1506 aa7.48□□□□□ -1.21
RTN1-207ENST00000490111 BCORL1Q5H9F3 1711 aa7.48□□□□□ -1.21
RTN1-207ENST00000490111 UACAQ9BZF9 1416 aa7.47□□□□□ -1.21
RTN1-207ENST00000490111 DMRT2Q9Y5R5 561 aa7.47□□□□□ -1.21
RTN1-207ENST00000490111 ARID4BQ4LE39 1312 aaPredicted RBP7.47□□□□□ -1.21
RTN1-207ENST00000490111 KDM5BQ9UGL1 1544 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms