RNA–Protein interactions for RNA: ENST00000490006.6

LINC01140-207, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 1,389 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-207ENST00000490006 RANGAP1P46060 587 aaPredicted RBP17.28■□□□□ 0.36
LINC01140-207ENST00000490006 MAPK8IP2Q13387 824 aaPredicted RBP17.28■□□□□ 0.36
LINC01140-207ENST00000490006 CHD1O14646 1710 aa17.27■□□□□ 0.36
LINC01140-207ENST00000490006 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.35
LINC01140-207ENST00000490006 ADAMTS12P58397 1594 aa17.26■□□□□ 0.35
LINC01140-207ENST00000490006 RAPGEF2Q9Y4G8 1499 aa17.25■□□□□ 0.35
LINC01140-207ENST00000490006 GRIN2AQ12879 1464 aa17.23■□□□□ 0.35
LINC01140-207ENST00000490006 CUL7Q14999 1698 aa17.23■□□□□ 0.35
LINC01140-207ENST00000490006 PRXQ9BXM0 1461 aa17.2■□□□□ 0.34
LINC01140-207ENST00000490006 DMRT2Q9Y5R5 561 aa17.2■□□□□ 0.34
LINC01140-207ENST00000490006 TTBK1Q5TCY1 1321 aaPredicted RBP17.14■□□□□ 0.33
LINC01140-207ENST00000490006 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
LINC01140-207ENST00000490006 JPH4Q96JJ6 628 aa17.14■□□□□ 0.33
LINC01140-207ENST00000490006 CEP170Q5SW79 1584 aa17.12■□□□□ 0.33
LINC01140-207ENST00000490006 NUP160Q12769 1436 aa17.1■□□□□ 0.33
LINC01140-207ENST00000490006 P3H3Q8IVL6 736 aa17.1■□□□□ 0.33
LINC01140-207ENST00000490006 GOLGA3Q08378 1498 aa17.1■□□□□ 0.33
LINC01140-207ENST00000490006 DNAJC5Q9H3Z4 198 aa17.09■□□□□ 0.33
LINC01140-207ENST00000490006 KIF21BO75037 1637 aa17.08■□□□□ 0.33
LINC01140-207ENST00000490006 KIAA0586Q9BVV6 1533 aa17.06■□□□□ 0.32
LINC01140-207ENST00000490006 CLASP1Q7Z460 1538 aa17.02■□□□□ 0.31
LINC01140-207ENST00000490006 PRG4Q92954 1404 aaPredicted RBP17.02■□□□□ 0.31
LINC01140-207ENST00000490006 IQGAP2Q13576 1575 aa16.99■□□□□ 0.31
LINC01140-207ENST00000490006 CYB5RLQ6IPT4 315 aa16.98■□□□□ 0.31
LINC01140-207ENST00000490006 CTTNBP2Q8WZ74 1663 aa16.98■□□□□ 0.31
LINC01140-207ENST00000490006 TNIKQ9UKE5 1360 aa16.96■□□□□ 0.31
LINC01140-207ENST00000490006 ERCC6L2Q5T890 1561 aa16.93■□□□□ 0.3
LINC01140-207ENST00000490006 CARMIL2Q6F5E8 1435 aa16.93■□□□□ 0.3
LINC01140-207ENST00000490006 ATP1B4Q9UN42 357 aaPredicted RBP16.91■□□□□ 0.3
LINC01140-207ENST00000490006 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
LINC01140-207ENST00000490006 RIMBP3CA6NJZ7 1639 aa16.88■□□□□ 0.29
LINC01140-207ENST00000490006 RIMBP3BA6NNM3 1639 aa16.88■□□□□ 0.29
LINC01140-207ENST00000490006 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
LINC01140-207ENST00000490006 RIMBP3Q9UFD9 1639 aa16.88■□□□□ 0.29
LINC01140-207ENST00000490006 UGGT2Q9NYU1 1516 aa16.88■□□□□ 0.29
LINC01140-207ENST00000490006 PTPRGP23470 1445 aa16.88■□□□□ 0.29
LINC01140-207ENST00000490006 DISP1Q96F81 1524 aa16.86■□□□□ 0.29
LINC01140-207ENST00000490006 CLIP1P30622 1438 aa16.86■□□□□ 0.29
LINC01140-207ENST00000490006 FHOD3Q2V2M9 1422 aa16.85■□□□□ 0.29
LINC01140-207ENST00000490006 ARID3CA6NKF2 412 aa16.85■□□□□ 0.29
LINC01140-207ENST00000490006 CEP162Q5TB80 1403 aa16.84■□□□□ 0.29
LINC01140-207ENST00000490006 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
LINC01140-207ENST00000490006 ARHGAP35Q9NRY4 1499 aa16.8■□□□□ 0.28
LINC01140-207ENST00000490006 KIAA0556O60303 1618 aa16.8■□□□□ 0.28
LINC01140-207ENST00000490006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
LINC01140-207ENST00000490006 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
LINC01140-207ENST00000490006 NPM1P06748 294 aaKnown RBP eCLIP16.77■□□□□ 0.27
LINC01140-207ENST00000490006 SAMD9Q5K651 1589 aa16.75■□□□□ 0.27
LINC01140-207ENST00000490006 EFCAB5A4FU69 1503 aa16.75■□□□□ 0.27
LINC01140-207ENST00000490006 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
LINC01140-207ENST00000490006 PLB1Q6P1J6 1458 aa16.71■□□□□ 0.27
LINC01140-207ENST00000490006 UACAQ9BZF9 1416 aa16.71■□□□□ 0.27
LINC01140-207ENST00000490006 FMN1Q68DA7 1419 aa16.68■□□□□ 0.26
LINC01140-207ENST00000490006 APLP2Q06481 763 aa16.64■□□□□ 0.25
LINC01140-207ENST00000490006 KCNH8Q96L42 1107 aa16.64■□□□□ 0.25
LINC01140-207ENST00000490006 ABCA8O94911 1581 aa16.6■□□□□ 0.25
LINC01140-207ENST00000490006 RAPGEF6Q8TEU7 1601 aa16.6■□□□□ 0.25
LINC01140-207ENST00000490006 ADCY10Q96PN6 1610 aa16.6■□□□□ 0.25
LINC01140-207ENST00000490006 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
LINC01140-207ENST00000490006 ABCC2Q92887 1545 aa16.59■□□□□ 0.25
LINC01140-207ENST00000490006 PPARGC1BQ86YN6 1023 aaKnown RBP16.59■□□□□ 0.25
LINC01140-207ENST00000490006 PLEKHD1A6NEE1 506 aa16.58■□□□□ 0.24
LINC01140-207ENST00000490006 VPS8Q8N3P4 1428 aa16.58■□□□□ 0.24
LINC01140-207ENST00000490006 CASKIN1Q8WXD9 1431 aa16.57■□□□□ 0.24
LINC01140-207ENST00000490006 UHRF1BP1LA0JNW5 1464 aa16.57■□□□□ 0.24
LINC01140-207ENST00000490006 ATP10BO94823 1461 aa16.57■□□□□ 0.24
LINC01140-207ENST00000490006 CACNB1Q02641 598 aaPredicted RBP16.56■□□□□ 0.24
LINC01140-207ENST00000490006 NUP153P49790 1475 aaKnown RBP16.55■□□□□ 0.24
LINC01140-207ENST00000490006 CDK11AQ9UQ88 783 aaPredicted RBP16.55■□□□□ 0.24
LINC01140-207ENST00000490006 PCF11O94913 1555 aaKnown RBP16.54■□□□□ 0.24
LINC01140-207ENST00000490006 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
LINC01140-207ENST00000490006 CDK13Q14004 1512 aaKnown RBP16.54■□□□□ 0.24
LINC01140-207ENST00000490006 HECW1Q76N89 1606 aa16.51■□□□□ 0.23
LINC01140-207ENST00000490006 FAM69CQ0P6D2 419 aa16.51■□□□□ 0.23
LINC01140-207ENST00000490006 EPRSP07814 1512 aaKnown RBP16.51■□□□□ 0.23
LINC01140-207ENST00000490006 KDM5BQ9UGL1 1544 aa16.51■□□□□ 0.23
LINC01140-207ENST00000490006 FYCO1Q9BQS8 1478 aa16.5■□□□□ 0.23
LINC01140-207ENST00000490006 ASXL2Q76L83 1435 aa16.5■□□□□ 0.23
LINC01140-207ENST00000490006 ZCCHC11Q5TAX3 1644 aaKnown RBP16.5■□□□□ 0.23
LINC01140-207ENST00000490006 KANK4Q5T7N3 995 aaPredicted RBP16.48■□□□□ 0.23
LINC01140-207ENST00000490006 HOXD11P31277 338 aaPredicted RBP16.47■□□□□ 0.23
LINC01140-207ENST00000490006 MTUS2Q5JR59 1369 aa16.45■□□□□ 0.22
LINC01140-207ENST00000490006 LRRIQ1Q96JM4 1722 aa16.44■□□□□ 0.22
LINC01140-207ENST00000490006 CCDC18Q5T9S5 1454 aa16.43■□□□□ 0.22
LINC01140-207ENST00000490006 CNKSR2Q8WXI2 1034 aa16.41■□□□□ 0.22
LINC01140-207ENST00000490006 WDR7Q9Y4E6 1490 aa16.41■□□□□ 0.22
LINC01140-207ENST00000490006 MAPKBP1O60336 1514 aa16.37■□□□□ 0.21
LINC01140-207ENST00000490006 TROQ12816 1431 aaPredicted RBP16.37■□□□□ 0.21
LINC01140-207ENST00000490006 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
LINC01140-207ENST00000490006 MAGI3Q5TCQ9 1506 aa16.35■□□□□ 0.21
LINC01140-207ENST00000490006 ABCC10Q5T3U5 1492 aa16.34■□□□□ 0.21
LINC01140-207ENST00000490006 ZNF777Q9ULD5 760 aaPredicted RBP16.34■□□□□ 0.21
LINC01140-207ENST00000490006 LRRC9Q6ZRR7 1453 aa16.34■□□□□ 0.21
LINC01140-207ENST00000490006 TSPOAP1O95153 1857 aa16.32■□□□□ 0.2
LINC01140-207ENST00000490006 CD109Q6YHK3 1445 aa16.31■□□□□ 0.2
LINC01140-207ENST00000490006 KIF14Q15058 1648 aa16.3■□□□□ 0.2
LINC01140-207ENST00000490006 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
LINC01140-207ENST00000490006 CFAP43Q8NDM7 1665 aa16.29■□□□□ 0.2
LINC01140-207ENST00000490006 MAP3K1Q13233 1512 aa16.29■□□□□ 0.2
LINC01140-207ENST00000490006 RNF216Q9NWF9 866 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms