RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
VPS26A-205ENST00000489656 CEP162Q5TB80 1403 aa22.78■■□□□ 1.24
VPS26A-205ENST00000489656 GRIN2AQ12879 1464 aa22.74■■□□□ 1.23
VPS26A-205ENST00000489656 CHD1O14646 1710 aa22.72■■□□□ 1.23
VPS26A-205ENST00000489656 CLIP1P30622 1438 aa22.66■■□□□ 1.22
VPS26A-205ENST00000489656 IQGAP2Q13576 1575 aa22.63■■□□□ 1.21
VPS26A-205ENST00000489656 CEP170Q5SW79 1584 aa22.63■■□□□ 1.21
VPS26A-205ENST00000489656 NUP160Q12769 1436 aa22.61■■□□□ 1.21
VPS26A-205ENST00000489656 CHMP7Q8WUX9 453 aaPredicted RBP22.61■■□□□ 1.21
VPS26A-205ENST00000489656 EFCAB5A4FU69 1503 aa22.61■■□□□ 1.21
VPS26A-205ENST00000489656 KIAA0586Q9BVV6 1533 aa22.59■■□□□ 1.21
VPS26A-205ENST00000489656 SAMD9Q5K651 1589 aa22.58■■□□□ 1.2
VPS26A-205ENST00000489656 ARHGAP35Q9NRY4 1499 aa22.57■■□□□ 1.2
VPS26A-205ENST00000489656 UGGT2Q9NYU1 1516 aa22.53■■□□□ 1.2
VPS26A-205ENST00000489656 ARAP1Q96P48 1450 aa22.53■■□□□ 1.2
VPS26A-205ENST00000489656 FBLN2P98095 1184 aa22.49■■□□□ 1.19
VPS26A-205ENST00000489656 VPS8Q8N3P4 1428 aa22.46■■□□□ 1.19
VPS26A-205ENST00000489656 SHROOM2Q13796 1616 aa22.43■■□□□ 1.18
VPS26A-205ENST00000489656 CLASP1Q7Z460 1538 aa22.42■■□□□ 1.18
VPS26A-205ENST00000489656 RANGAP1P46060 587 aaPredicted RBP22.42■■□□□ 1.18
VPS26A-205ENST00000489656 KIAA0556O60303 1618 aa22.42■■□□□ 1.18
VPS26A-205ENST00000489656 DISP1Q96F81 1524 aa22.38■■□□□ 1.17
VPS26A-205ENST00000489656 FHOD3Q2V2M9 1422 aa22.35■■□□□ 1.17
VPS26A-205ENST00000489656 FMN1Q68DA7 1419 aa22.31■■□□□ 1.16
VPS26A-205ENST00000489656 PCF11O94913 1555 aaKnown RBP22.3■■□□□ 1.16
VPS26A-205ENST00000489656 JPH4Q96JJ6 628 aa22.3■■□□□ 1.16
VPS26A-205ENST00000489656 CARMIL2Q6F5E8 1435 aa22.29■■□□□ 1.16
VPS26A-205ENST00000489656 FYCO1Q9BQS8 1478 aa22.27■■□□□ 1.16
VPS26A-205ENST00000489656 P3H3Q8IVL6 736 aa22.25■■□□□ 1.15
VPS26A-205ENST00000489656 CASKIN1Q8WXD9 1431 aa22.24■■□□□ 1.15
VPS26A-205ENST00000489656 CFAP43Q8NDM7 1665 aa22.23■■□□□ 1.15
VPS26A-205ENST00000489656 PRG4Q92954 1404 aaPredicted RBP22.23■■□□□ 1.15
VPS26A-205ENST00000489656 MAP3K1Q13233 1512 aa22.22■■□□□ 1.15
VPS26A-205ENST00000489656 LRRIQ1Q96JM4 1722 aa22.22■■□□□ 1.15
VPS26A-205ENST00000489656 HECW1Q76N89 1606 aa22.19■■□□□ 1.14
VPS26A-205ENST00000489656 RAPGEF6Q8TEU7 1601 aa22.17■■□□□ 1.14
VPS26A-205ENST00000489656 TIAM1Q13009 1591 aa22.17■■□□□ 1.14
VPS26A-205ENST00000489656 OSCARQ8IYS5 282 aa22.17■■□□□ 1.14
VPS26A-205ENST00000489656 PPP6R1Q9UPN7 881 aa22.16■■□□□ 1.14
VPS26A-205ENST00000489656 ERCC6L2Q5T890 1561 aa22.15■■□□□ 1.14
VPS26A-205ENST00000489656 ADRA2BP18089 450 aa22.12■■□□□ 1.13
VPS26A-205ENST00000489656 ABCA8O94911 1581 aa22.12■■□□□ 1.13
VPS26A-205ENST00000489656 APLP2Q06481 763 aa22.11■■□□□ 1.13
VPS26A-205ENST00000489656 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
VPS26A-205ENST00000489656 PTPRGP23470 1445 aa22.05■■□□□ 1.12
VPS26A-205ENST00000489656 EPRSP07814 1512 aaKnown RBP22.04■■□□□ 1.12
VPS26A-205ENST00000489656 NUP153P49790 1475 aaKnown RBP22.03■■□□□ 1.12
VPS26A-205ENST00000489656 PLB1Q6P1J6 1458 aa22.03■■□□□ 1.12
VPS26A-205ENST00000489656 LRRC9Q6ZRR7 1453 aa22.02■■□□□ 1.12
VPS26A-205ENST00000489656 ABCC2Q92887 1545 aa21.96■■□□□ 1.11
VPS26A-205ENST00000489656 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
VPS26A-205ENST00000489656 UACAQ9BZF9 1416 aa21.96■■□□□ 1.11
VPS26A-205ENST00000489656 CDK13Q14004 1512 aaKnown RBP21.96■■□□□ 1.11
VPS26A-205ENST00000489656 EHBP1L1Q8N3D4 1523 aa21.96■■□□□ 1.11
VPS26A-205ENST00000489656 UHRF1BP1LA0JNW5 1464 aa21.95■■□□□ 1.1
VPS26A-205ENST00000489656 KANK4Q5T7N3 995 aaPredicted RBP21.94■■□□□ 1.1
VPS26A-205ENST00000489656 PPARGC1BQ86YN6 1023 aaKnown RBP21.94■■□□□ 1.1
VPS26A-205ENST00000489656 PIAS4Q8N2W9 510 aaPredicted RBP21.93■■□□□ 1.1
VPS26A-205ENST00000489656 SUPT6HQ7KZ85 1726 aaKnown RBP21.92■■□□□ 1.1
VPS26A-205ENST00000489656 TTBK1Q5TCY1 1321 aaPredicted RBP21.92■■□□□ 1.1
VPS26A-205ENST00000489656 MAGI3Q5TCQ9 1506 aa21.91■■□□□ 1.1
VPS26A-205ENST00000489656 ARHGEF11O15085 1522 aa21.9■■□□□ 1.1
VPS26A-205ENST00000489656 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.09
VPS26A-205ENST00000489656 ADCY10Q96PN6 1610 aa21.88■■□□□ 1.09
VPS26A-205ENST00000489656 ATP10BO94823 1461 aa21.87■■□□□ 1.09
VPS26A-205ENST00000489656 RIMBP3CA6NJZ7 1639 aa21.86■■□□□ 1.09
VPS26A-205ENST00000489656 RIMBP3BA6NNM3 1639 aa21.86■■□□□ 1.09
VPS26A-205ENST00000489656 RIMBP3Q9UFD9 1639 aa21.86■■□□□ 1.09
VPS26A-205ENST00000489656 MTUS2Q5JR59 1369 aa21.86■■□□□ 1.09
VPS26A-205ENST00000489656 ZCCHC11Q5TAX3 1644 aaKnown RBP21.85■■□□□ 1.09
VPS26A-205ENST00000489656 KDM5BQ9UGL1 1544 aa21.83■■□□□ 1.09
VPS26A-205ENST00000489656 CDK11AQ9UQ88 783 aaPredicted RBP21.8■■□□□ 1.08
VPS26A-205ENST00000489656 TROQ12816 1431 aaPredicted RBP21.8■■□□□ 1.08
VPS26A-205ENST00000489656 NCOA2Q15596 1464 aa21.78■■□□□ 1.08
VPS26A-205ENST00000489656 RRBP1Q9P2E9 1410 aaKnown RBP21.77■■□□□ 1.08
VPS26A-205ENST00000489656 KIF14Q15058 1648 aa21.74■■□□□ 1.07
VPS26A-205ENST00000489656 ARID3CA6NKF2 412 aa21.74■■□□□ 1.07
VPS26A-205ENST00000489656 PHLDB1Q86UU1 1377 aa21.74■■□□□ 1.07
VPS26A-205ENST00000489656 ITSN2Q9NZM3 1697 aa21.72■■□□□ 1.07
VPS26A-205ENST00000489656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.72■■□□□ 1.07
VPS26A-205ENST00000489656 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
VPS26A-205ENST00000489656 PCGF6Q9BYE7 350 aa21.7■■□□□ 1.06
VPS26A-205ENST00000489656 MSH5O43196 834 aa21.69■■□□□ 1.06
VPS26A-205ENST00000489656 MYOM3Q5VTT5 1437 aa21.69■■□□□ 1.06
VPS26A-205ENST00000489656 CDC42BPAQ5VT25 1732 aa21.69■■□□□ 1.06
VPS26A-205ENST00000489656 PLEKHD1A6NEE1 506 aa21.68■■□□□ 1.06
VPS26A-205ENST00000489656 ABCC10Q5T3U5 1492 aa21.65■■□□□ 1.06
VPS26A-205ENST00000489656 FGD6Q6ZV73 1430 aa21.65■■□□□ 1.06
VPS26A-205ENST00000489656 CCNB3Q8WWL7 1395 aa21.65■■□□□ 1.06
VPS26A-205ENST00000489656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.64■■□□□ 1.069e-8■□□□□ 9.9
VPS26A-205ENST00000489656 PTPN23Q9H3S7 1636 aa21.63■■□□□ 1.05
VPS26A-205ENST00000489656 MIA2Q96PC5 1412 aa21.62■■□□□ 1.05
VPS26A-205ENST00000489656 MYO5CQ9NQX4 1742 aa21.61■■□□□ 1.05
VPS26A-205ENST00000489656 WDR7Q9Y4E6 1490 aa21.6■■□□□ 1.05
VPS26A-205ENST00000489656 PREX2Q70Z35 1606 aa21.6■■□□□ 1.05
VPS26A-205ENST00000489656 TCOF1Q13428 1488 aaKnown RBP21.59■■□□□ 1.05
VPS26A-205ENST00000489656 CDC42BPBQ9Y5S2 1711 aa21.59■■□□□ 1.05
VPS26A-205ENST00000489656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.59■■□□□ 1.05
VPS26A-205ENST00000489656 TTC37Q6PGP7 1564 aa21.58■■□□□ 1.05
VPS26A-205ENST00000489656 GPATCH8Q9UKJ3 1502 aaKnown RBP21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms