RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
SCMH1-216ENST00000489421 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
SCMH1-216ENST00000489421 FKBP8Q14318 412 aa13.04□□□□□ -0.32
SCMH1-216ENST00000489421 WIZO95785 1651 aa13.03□□□□□ -0.32
SCMH1-216ENST00000489421 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
SCMH1-216ENST00000489421 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
SCMH1-216ENST00000489421 BAZ1BQ9UIG0 1483 aaKnown RBP12.99□□□□□ -0.33
SCMH1-216ENST00000489421 KIF21AQ7Z4S6 1674 aa12.97□□□□□ -0.33
SCMH1-216ENST00000489421 NESP48681 1621 aa12.97□□□□□ -0.33
SCMH1-216ENST00000489421 THOC2Q8NI27 1593 aaKnown RBP12.9□□□□□ -0.34
SCMH1-216ENST00000489421 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
SCMH1-216ENST00000489421 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
SCMH1-216ENST00000489421 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
SCMH1-216ENST00000489421 PRDM2Q13029 1718 aa12.83□□□□□ -0.36
SCMH1-216ENST00000489421 ERCC6Q03468 1493 aa12.83□□□□□ -0.36
SCMH1-216ENST00000489421 CUX2O14529 1486 aa12.8□□□□□ -0.36
SCMH1-216ENST00000489421 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
SCMH1-216ENST00000489421 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
SCMH1-216ENST00000489421 GABBR2O75899 941 aa12.76□□□□□ -0.37
SCMH1-216ENST00000489421 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
SCMH1-216ENST00000489421 MIER1Q8N108 512 aa12.73□□□□□ -0.37
SCMH1-216ENST00000489421 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
SCMH1-216ENST00000489421 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
SCMH1-216ENST00000489421 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
SCMH1-216ENST00000489421 PLCD3Q8N3E9 789 aa12.67□□□□□ -0.38
SCMH1-216ENST00000489421 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
SCMH1-216ENST00000489421 WDR62O43379 1518 aa12.66□□□□□ -0.38
SCMH1-216ENST00000489421 PLEKHG5O94827 1062 aa12.64□□□□□ -0.39
SCMH1-216ENST00000489421 PDS5BQ9NTI5 1447 aa12.63□□□□□ -0.39
SCMH1-216ENST00000489421 CFTRP13569 1480 aa12.63□□□□□ -0.39
SCMH1-216ENST00000489421 MRC2Q9UBG0 1479 aa12.62□□□□□ -0.39
SCMH1-216ENST00000489421 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
SCMH1-216ENST00000489421 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
SCMH1-216ENST00000489421 PHF12Q96QT6 1004 aa12.61□□□□□ -0.39
SCMH1-216ENST00000489421 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
SCMH1-216ENST00000489421 CEP164Q9UPV0 1460 aa12.59□□□□□ -0.39
SCMH1-216ENST00000489421 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
SCMH1-216ENST00000489421 CLCN6P51797 869 aa12.57□□□□□ -0.4
SCMH1-216ENST00000489421 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
SCMH1-216ENST00000489421 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
SCMH1-216ENST00000489421 URB2Q14146 1524 aaKnown RBP12.56□□□□□ -0.4
SCMH1-216ENST00000489421 GALR2O43603 387 aaPredicted RBP12.54□□□□□ -0.4
SCMH1-216ENST00000489421 POTEIP0CG38 1075 aa12.54□□□□□ -0.4
SCMH1-216ENST00000489421 DNAJC5Q9H3Z4 198 aa12.54□□□□□ -0.4
SCMH1-216ENST00000489421 VASPP50552 380 aaPredicted RBP12.53□□□□□ -0.4
SCMH1-216ENST00000489421 CCDC61Q9Y6R9 512 aa12.52□□□□□ -0.41
SCMH1-216ENST00000489421 NUBP1P53384 320 aa12.51□□□□□ -0.41
SCMH1-216ENST00000489421 ZBTB47Q9UFB7 747 aaPredicted RBP12.51□□□□□ -0.41
SCMH1-216ENST00000489421 MS4A3Q96HJ5 214 aa12.45□□□□□ -0.42
SCMH1-216ENST00000489421 DCBLD2Q96PD2 775 aa12.43□□□□□ -0.42
SCMH1-216ENST00000489421 KIF12Q96FN5 646 aa12.42□□□□□ -0.42
SCMH1-216ENST00000489421 TOPBP1Q92547 1522 aa12.42□□□□□ -0.42
SCMH1-216ENST00000489421 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
SCMH1-216ENST00000489421 TARBP1Q13395 1621 aaKnown RBP12.4□□□□□ -0.42
SCMH1-216ENST00000489421 EIF4G3O43432 1585 aaKnown RBP12.39□□□□□ -0.43
SCMH1-216ENST00000489421 CHD1O14646 1710 aa12.37□□□□□ -0.43
SCMH1-216ENST00000489421 ZNF608Q9ULD9 1512 aaPredicted RBP12.37□□□□□ -0.43
SCMH1-216ENST00000489421 MAP3K13O43283 966 aa12.36□□□□□ -0.43
SCMH1-216ENST00000489421 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
SCMH1-216ENST00000489421 FAM212AQ96EL1 285 aa12.36□□□□□ -0.43
SCMH1-216ENST00000489421 WDR97A6NE52 1622 aa12.36□□□□□ -0.43
SCMH1-216ENST00000489421 IFNLR1Q8IU57 520 aaPredicted RBP12.35□□□□□ -0.43
SCMH1-216ENST00000489421 TRPC6Q9Y210 931 aa12.32□□□□□ -0.44
SCMH1-216ENST00000489421 IFT140Q96RY7 1462 aa12.3□□□□□ -0.44
SCMH1-216ENST00000489421 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
SCMH1-216ENST00000489421 CUX1P39880 1505 aa12.3□□□□□ -0.44
SCMH1-216ENST00000489421 POLA1P09884 1462 aaPredicted RBP12.29□□□□□ -0.44
SCMH1-216ENST00000489421 DCAF8Q5TAQ9 597 aa12.29□□□□□ -0.44
SCMH1-216ENST00000489421 ABCC8Q09428 1581 aa12.28□□□□□ -0.44
SCMH1-216ENST00000489421 ASTLQ6HA08 431 aaPredicted RBP12.28□□□□□ -0.44
SCMH1-216ENST00000489421 PBRM1Q86U86 1689 aa12.27□□□□□ -0.45
SCMH1-216ENST00000489421 ATMINO43313 823 aaPredicted RBP12.27□□□□□ -0.45
SCMH1-216ENST00000489421 LHX8Q68G74 356 aa12.26□□□□□ -0.45
SCMH1-216ENST00000489421 PCDHB13Q9Y5F0 798 aa12.25□□□□□ -0.45
SCMH1-216ENST00000489421 FGD5Q6ZNL6 1462 aa12.24□□□□□ -0.45
SCMH1-216ENST00000489421 BMP2KQ9NSY1 1161 aaPredicted RBP12.24□□□□□ -0.45
SCMH1-216ENST00000489421 RAD54L2Q9Y4B4 1467 aa12.24□□□□□ -0.45
SCMH1-216ENST00000489421 PYGBP11216 843 aa12.23□□□□□ -0.45
SCMH1-216ENST00000489421 IFNL1Q8IU54 200 aa12.23□□□□□ -0.45
SCMH1-216ENST00000489421 SGIP1Q9BQI5 828 aa12.23□□□□□ -0.45
SCMH1-216ENST00000489421 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
SCMH1-216ENST00000489421 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
SCMH1-216ENST00000489421 SPOCK2Q92563 424 aa12.22□□□□□ -0.45
SCMH1-216ENST00000489421 RIMBP3CA6NJZ7 1639 aa12.22□□□□□ -0.45
SCMH1-216ENST00000489421 RIMBP3BA6NNM3 1639 aa12.22□□□□□ -0.45
SCMH1-216ENST00000489421 RIMBP3Q9UFD9 1639 aa12.22□□□□□ -0.45
SCMH1-216ENST00000489421 AQRO60306 1485 aaKnown RBP eCLIP12.2□□□□□ -0.46
SCMH1-216ENST00000489421 SYNJ1O43426 1573 aa12.19□□□□□ -0.46
SCMH1-216ENST00000489421 TIE1P35590 1138 aa12.19□□□□□ -0.46
SCMH1-216ENST00000489421 GSE1Q14687 1217 aa12.19□□□□□ -0.46
SCMH1-216ENST00000489421 ABCA5Q8WWZ7 1642 aa12.19□□□□□ -0.46
SCMH1-216ENST00000489421 TTLL13PA6NNM8 815 aa12.16□□□□□ -0.46
SCMH1-216ENST00000489421 TOP2BQ02880 1626 aa12.15□□□□□ -0.46
SCMH1-216ENST00000489421 POTEB2H3BUK9 544 aa12.14□□□□□ -0.47
SCMH1-216ENST00000489421 METRNQ9UJH8 293 aa12.14□□□□□ -0.47
SCMH1-216ENST00000489421 SOGA1O94964 1423 aa12.13□□□□□ -0.47
SCMH1-216ENST00000489421 SLC39A7Q92504 469 aa12.13□□□□□ -0.47
SCMH1-216ENST00000489421 PCDHB8Q9UN66 801 aa12.12□□□□□ -0.47
SCMH1-216ENST00000489421 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
SCMH1-216ENST00000489421 SNAPC4Q5SXM2 1469 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 1206.8 ms