RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 DNMBPQ6XZF7 1577 aa28.09■■■□□ 2.09
HMG20B-213ENST00000488973 TIAM1Q13009 1591 aa28.08■■■□□ 2.09
HMG20B-213ENST00000488973 MAPKBP1O60336 1514 aa28.07■■■□□ 2.08
HMG20B-213ENST00000488973 ERICH6Q7L0X2 663 aa28.06■■■□□ 2.08
HMG20B-213ENST00000488973 RAB3GAP2Q9H2M9 1393 aa28.05■■■□□ 2.08
HMG20B-213ENST00000488973 PDS5BQ9NTI5 1447 aa28.04■■■□□ 2.08
HMG20B-213ENST00000488973 TOPBP1Q92547 1522 aa28.02■■■□□ 2.08
HMG20B-213ENST00000488973 ANP32EQ9BTT0 268 aa28.01■■■□□ 2.07
HMG20B-213ENST00000488973 ITGAEP38570 1179 aa27.97■■■□□ 2.07
HMG20B-213ENST00000488973 SETD5Q9C0A6 1442 aa27.96■■■□□ 2.07
HMG20B-213ENST00000488973 IGF1RP08069 1367 aa27.95■■■□□ 2.06
HMG20B-213ENST00000488973 LRRC9Q6ZRR7 1453 aa27.93■■■□□ 2.06
HMG20B-213ENST00000488973 POLA1P09884 1462 aaPredicted RBP27.92■■■□□ 2.06
HMG20B-213ENST00000488973 URB2Q14146 1524 aaKnown RBP27.9■■■□□ 2.06
HMG20B-213ENST00000488973 CFAP43Q8NDM7 1665 aa27.9■■■□□ 2.06
HMG20B-213ENST00000488973 ABCA10Q8WWZ4 1543 aa27.9■■■□□ 2.06
HMG20B-213ENST00000488973 WDR97A6NE52 1622 aa27.85■■■□□ 2.05
HMG20B-213ENST00000488973 TSHZ2Q9NRE2 1034 aa27.84■■■□□ 2.05
HMG20B-213ENST00000488973 FHAD1B1AJZ9 1412 aa27.84■■■□□ 2.05
HMG20B-213ENST00000488973 CARMIL1Q5VZK9 1371 aa27.83■■■□□ 2.05
HMG20B-213ENST00000488973 PHLDB1Q86UU1 1377 aa27.82■■■□□ 2.04
HMG20B-213ENST00000488973 RAD54L2Q9Y4B4 1467 aa27.82■■■□□ 2.04
HMG20B-213ENST00000488973 TIMELESSQ9UNS1 1208 aa27.81■■■□□ 2.04
HMG20B-213ENST00000488973 KCNH8Q96L42 1107 aa27.8■■■□□ 2.04
HMG20B-213ENST00000488973 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
HMG20B-213ENST00000488973 PCF11O94913 1555 aaKnown RBP27.76■■■□□ 2.03
HMG20B-213ENST00000488973 DDX10Q13206 875 aaKnown RBP27.7■■■□□ 2.02
HMG20B-213ENST00000488973 SIN3AQ96ST3 1273 aa27.7■■■□□ 2.02
HMG20B-213ENST00000488973 PPP1R15AO75807 674 aaPredicted RBP27.69■■■□□ 2.02
HMG20B-213ENST00000488973 FAM50AQ14320 339 aaKnown RBP27.69■■■□□ 2.02
HMG20B-213ENST00000488973 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.69■■■□□ 2.021e-6■■□□□ 12.5
HMG20B-213ENST00000488973 FYCO1Q9BQS8 1478 aa27.65■■■□□ 2.02
HMG20B-213ENST00000488973 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.01
HMG20B-213ENST00000488973 EFCAB5A4FU69 1503 aa27.63■■■□□ 2.01
HMG20B-213ENST00000488973 CCER2I3L3R5 266 aa27.61■■■□□ 2.01
HMG20B-213ENST00000488973 AQRO60306 1485 aaKnown RBP eCLIP27.61■■■□□ 2.011e-7■■■■■ 30.7
HMG20B-213ENST00000488973 CUL7Q14999 1698 aa27.6■■■□□ 2.01
HMG20B-213ENST00000488973 ABCA5Q8WWZ7 1642 aa27.59■■■□□ 2.01
HMG20B-213ENST00000488973 CASKIN1Q8WXD9 1431 aa27.58■■■□□ 2.01
HMG20B-213ENST00000488973 FKBP8Q14318 412 aa27.57■■■□□ 2
HMG20B-213ENST00000488973 TARBP1Q13395 1621 aaKnown RBP27.55■■■□□ 2
HMG20B-213ENST00000488973 GAPVD1Q14C86 1478 aa27.54■■■□□ 2
HMG20B-213ENST00000488973 TDRD9Q8NDG6 1382 aaKnown RBP27.53■■■□□ 2
HMG20B-213ENST00000488973 CTTNBP2Q8WZ74 1663 aa27.53■■■□□ 2
HMG20B-213ENST00000488973 FHOD3Q2V2M9 1422 aa27.52■■■□□ 2
HMG20B-213ENST00000488973 ANP32CO43423 234 aa27.5■■□□□ 1.99
HMG20B-213ENST00000488973 P3H3Q8IVL6 736 aa27.5■■□□□ 1.99
HMG20B-213ENST00000488973 BCANQ96GW7 911 aa27.49■■□□□ 1.99
HMG20B-213ENST00000488973 WDR62O43379 1518 aa27.48■■□□□ 1.99
HMG20B-213ENST00000488973 NEFLP07196 543 aa27.47■■□□□ 1.99
HMG20B-213ENST00000488973 ATP1B4Q9UN42 357 aaPredicted RBP27.46■■□□□ 1.99
HMG20B-213ENST00000488973 FGD6Q6ZV73 1430 aa27.46■■□□□ 1.99
HMG20B-213ENST00000488973 CCDC18Q5T9S5 1454 aa27.43■■□□□ 1.98
HMG20B-213ENST00000488973 TONSLQ96HA7 1378 aa27.42■■□□□ 1.98
HMG20B-213ENST00000488973 FMN1Q68DA7 1419 aa27.42■■□□□ 1.98
HMG20B-213ENST00000488973 UACAQ9BZF9 1416 aa27.4■■□□□ 1.98
HMG20B-213ENST00000488973 HIRIP3Q9BW71 556 aaPredicted RBP27.4■■□□□ 1.98
HMG20B-213ENST00000488973 HFM1A2PYH4 1435 aa27.4■■□□□ 1.98
HMG20B-213ENST00000488973 PTPN23Q9H3S7 1636 aa27.39■■□□□ 1.98
HMG20B-213ENST00000488973 SNAPC4Q5SXM2 1469 aa27.38■■□□□ 1.97
HMG20B-213ENST00000488973 IFT140Q96RY7 1462 aa27.38■■□□□ 1.97
HMG20B-213ENST00000488973 TRIM52Q96A61 297 aa27.36■■□□□ 1.97
HMG20B-213ENST00000488973 ERCC6Q03468 1493 aa27.35■■□□□ 1.97
HMG20B-213ENST00000488973 LRRIQ1Q96JM4 1722 aa27.32■■□□□ 1.96
HMG20B-213ENST00000488973 PTPRKQ15262 1439 aa27.3■■□□□ 1.96
HMG20B-213ENST00000488973 MTUS2Q5JR59 1369 aa27.29■■□□□ 1.96
HMG20B-213ENST00000488973 SAMD9Q5K651 1589 aa27.29■■□□□ 1.96
HMG20B-213ENST00000488973 RBM19Q9Y4C8 960 aaKnown RBP27.27■■□□□ 1.96
HMG20B-213ENST00000488973 GRIN2BQ13224 1484 aa27.27■■□□□ 1.96
HMG20B-213ENST00000488973 NAIPQ13075 1403 aa27.27■■□□□ 1.96
HMG20B-213ENST00000488973 THOC2Q8NI27 1593 aaKnown RBP27.27■■□□□ 1.96
HMG20B-213ENST00000488973 SUPT6HQ7KZ85 1726 aaKnown RBP27.26■■□□□ 1.95
HMG20B-213ENST00000488973 PBRM1Q86U86 1689 aa27.26■■□□□ 1.95
HMG20B-213ENST00000488973 KDM5BQ9UGL1 1544 aa27.25■■□□□ 1.95
HMG20B-213ENST00000488973 MYOM3Q5VTT5 1437 aa27.24■■□□□ 1.95
HMG20B-213ENST00000488973 NCOA2Q15596 1464 aa27.23■■□□□ 1.95
HMG20B-213ENST00000488973 ADAMTS12P58397 1594 aa27.2■■□□□ 1.94
HMG20B-213ENST00000488973 EHBP1L1Q8N3D4 1523 aa27.2■■□□□ 1.94
HMG20B-213ENST00000488973 ZNF608Q9ULD9 1512 aaPredicted RBP27.2■■□□□ 1.94
HMG20B-213ENST00000488973 GCC2Q8IWJ2 1684 aa27.15■■□□□ 1.94
HMG20B-213ENST00000488973 HECW1Q76N89 1606 aa27.13■■□□□ 1.93
HMG20B-213ENST00000488973 UGGT2Q9NYU1 1516 aa27.13■■□□□ 1.93
HMG20B-213ENST00000488973 ARHGEF11O15085 1522 aa27.13■■□□□ 1.93
HMG20B-213ENST00000488973 EIF4G3O43432 1585 aaKnown RBP27.07■■□□□ 1.92
HMG20B-213ENST00000488973 HNRNPUQ00839 825 aaKnown RBP eCLIP27.07■■□□□ 1.92
HMG20B-213ENST00000488973 TCOF1Q13428 1488 aaKnown RBP27.07■■□□□ 1.92
HMG20B-213ENST00000488973 AKNAQ7Z591 1439 aa27.05■■□□□ 1.92
HMG20B-213ENST00000488973 WASHC2AQ641Q2 1341 aa27.04■■□□□ 1.92
HMG20B-213ENST00000488973 DENND4BO75064 1496 aaPredicted RBP27.01■■□□□ 1.91
HMG20B-213ENST00000488973 HSPA5P11021 654 aaKnown RBP27.01■■□□□ 1.91
HMG20B-213ENST00000488973 ERICH6BQ5W0A0 696 aa27.01■■□□□ 1.91
HMG20B-213ENST00000488973 MAGI3Q5TCQ9 1506 aa27■■□□□ 1.91
HMG20B-213ENST00000488973 IQGAP2Q13576 1575 aa26.99■■□□□ 1.91
HMG20B-213ENST00000488973 MAGI1Q96QZ7 1491 aaPredicted RBP26.99■■□□□ 1.91
HMG20B-213ENST00000488973 CNTLNQ9NXG0 1405 aa26.97■■□□□ 1.91
HMG20B-213ENST00000488973 EIF4G2P78344 907 aaKnown RBP eCLIP26.96■■□□□ 1.91
HMG20B-213ENST00000488973 FANCIQ9NVI1 1328 aa26.95■■□□□ 1.9
HMG20B-213ENST00000488973 CDK11AQ9UQ88 783 aaPredicted RBP26.94■■□□□ 1.9
HMG20B-213ENST00000488973 GRIN2AQ12879 1464 aa26.93■■□□□ 1.9
HMG20B-213ENST00000488973 RRP7BPQ9NSQ0 103 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms