RNA–Protein interactions for RNA: ENST00000488334.1

GABBR1-215, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-215ENST00000488334 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
GABBR1-215ENST00000488334 SHROOM2Q13796 1616 aa23.81■■□□□ 1.4
GABBR1-215ENST00000488334 KIF21BO75037 1637 aa23.8■■□□□ 1.4
GABBR1-215ENST00000488334 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
GABBR1-215ENST00000488334 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
GABBR1-215ENST00000488334 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
GABBR1-215ENST00000488334 IQGAP2Q13576 1575 aa23.77■■□□□ 1.4
GABBR1-215ENST00000488334 PRG4Q92954 1404 aaPredicted RBP23.74■■□□□ 1.39
GABBR1-215ENST00000488334 GOLGA3Q08378 1498 aa23.7■■□□□ 1.38
GABBR1-215ENST00000488334 CARMIL2Q6F5E8 1435 aa23.7■■□□□ 1.38
GABBR1-215ENST00000488334 CTTNBP2Q8WZ74 1663 aa23.7■■□□□ 1.38
GABBR1-215ENST00000488334 UGGT2Q9NYU1 1516 aa23.68■■□□□ 1.38
GABBR1-215ENST00000488334 ARAP1Q96P48 1450 aa23.64■■□□□ 1.38
GABBR1-215ENST00000488334 CYB5RLQ6IPT4 315 aa23.63■■□□□ 1.37
GABBR1-215ENST00000488334 UBTFP17480 764 aaKnown RBP23.62■■□□□ 1.37
GABBR1-215ENST00000488334 ERCC6L2Q5T890 1561 aa23.59■■□□□ 1.37
GABBR1-215ENST00000488334 TNIKQ9UKE5 1360 aa23.57■■□□□ 1.36
GABBR1-215ENST00000488334 DISP1Q96F81 1524 aa23.56■■□□□ 1.36
GABBR1-215ENST00000488334 PTPRGP23470 1445 aa23.53■■□□□ 1.36
GABBR1-215ENST00000488334 KIAA0556O60303 1618 aa23.51■■□□□ 1.35
GABBR1-215ENST00000488334 EFCAB5A4FU69 1503 aa23.45■■□□□ 1.34
GABBR1-215ENST00000488334 EHMT2Q96KQ7 1210 aa23.45■■□□□ 1.34
GABBR1-215ENST00000488334 SAMD9Q5K651 1589 aa23.44■■□□□ 1.34
GABBR1-215ENST00000488334 UACAQ9BZF9 1416 aa23.38■■□□□ 1.33
GABBR1-215ENST00000488334 UHRF1BP1LA0JNW5 1464 aa23.36■■□□□ 1.33
GABBR1-215ENST00000488334 NPM1P06748 294 aaKnown RBP eCLIP23.36■■□□□ 1.33
GABBR1-215ENST00000488334 RANGAP1P46060 587 aaPredicted RBP23.35■■□□□ 1.33
GABBR1-215ENST00000488334 P3H3Q8IVL6 736 aa23.33■■□□□ 1.33
GABBR1-215ENST00000488334 TTBK1Q5TCY1 1321 aaPredicted RBP23.33■■□□□ 1.32
GABBR1-215ENST00000488334 ABCC2Q92887 1545 aa23.29■■□□□ 1.32
GABBR1-215ENST00000488334 ARHGAP35Q9NRY4 1499 aa23.29■■□□□ 1.32
GABBR1-215ENST00000488334 ADCY10Q96PN6 1610 aa23.28■■□□□ 1.32
GABBR1-215ENST00000488334 FHOD3Q2V2M9 1422 aa23.27■■□□□ 1.32
GABBR1-215ENST00000488334 FMN1Q68DA7 1419 aa23.27■■□□□ 1.32
GABBR1-215ENST00000488334 CLIP1P30622 1438 aa23.26■■□□□ 1.31
GABBR1-215ENST00000488334 LOC105371045A0A1W2PR82 267 aa23.26■■□□□ 1.31
GABBR1-215ENST00000488334 ABCA8O94911 1581 aa23.25■■□□□ 1.31
GABBR1-215ENST00000488334 PLB1Q6P1J6 1458 aa23.24■■□□□ 1.31
GABBR1-215ENST00000488334 KDM5BQ9UGL1 1544 aa23.22■■□□□ 1.31
GABBR1-215ENST00000488334 MAPKBP1O60336 1514 aa23.19■■□□□ 1.3
GABBR1-215ENST00000488334 CEP162Q5TB80 1403 aa23.19■■□□□ 1.3
GABBR1-215ENST00000488334 RAPGEF6Q8TEU7 1601 aa23.17■■□□□ 1.3
GABBR1-215ENST00000488334 NUP153P49790 1475 aaKnown RBP23.09■■□□□ 1.29
GABBR1-215ENST00000488334 ZCCHC11Q5TAX3 1644 aaKnown RBP23.08■■□□□ 1.29
GABBR1-215ENST00000488334 ATP10BO94823 1461 aa23.08■■□□□ 1.29
GABBR1-215ENST00000488334 ASXL2Q76L83 1435 aa23.08■■□□□ 1.28
GABBR1-215ENST00000488334 TRHP20396 242 aaPredicted RBP23.07■■□□□ 1.28
GABBR1-215ENST00000488334 CASKIN1Q8WXD9 1431 aa23.07■■□□□ 1.28
GABBR1-215ENST00000488334 ABCC10Q5T3U5 1492 aa23.05■■□□□ 1.28
GABBR1-215ENST00000488334 HECW1Q76N89 1606 aa23.05■■□□□ 1.28
GABBR1-215ENST00000488334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.02■■□□□ 1.28
GABBR1-215ENST00000488334 HNRNPUL2Q1KMD3 747 aaKnown RBP23.02■■□□□ 1.28
GABBR1-215ENST00000488334 CDK11AQ9UQ88 783 aaPredicted RBP23.02■■□□□ 1.28
GABBR1-215ENST00000488334 FYCO1Q9BQS8 1478 aa23.02■■□□□ 1.28
GABBR1-215ENST00000488334 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.28
GABBR1-215ENST00000488334 PLEKHD1A6NEE1 506 aa23■■□□□ 1.27
GABBR1-215ENST00000488334 ATP1B4Q9UN42 357 aaPredicted RBP23■■□□□ 1.27
GABBR1-215ENST00000488334 CCDC18Q5T9S5 1454 aa22.98■■□□□ 1.27
GABBR1-215ENST00000488334 EPRSP07814 1512 aaKnown RBP22.98■■□□□ 1.27
GABBR1-215ENST00000488334 FAM69CQ0P6D2 419 aa22.98■■□□□ 1.27
GABBR1-215ENST00000488334 ARID3CA6NKF2 412 aa22.95■■□□□ 1.26
GABBR1-215ENST00000488334 GLI2P10070 1586 aa22.95■■□□□ 1.26
GABBR1-215ENST00000488334 DIP2BQ9P265 1576 aa22.95■■□□□ 1.26
GABBR1-215ENST00000488334 VPS8Q8N3P4 1428 aa22.94■■□□□ 1.26
GABBR1-215ENST00000488334 PCF11O94913 1555 aaKnown RBP22.93■■□□□ 1.26
GABBR1-215ENST00000488334 KIF13AQ9H1H9 1805 aa22.89■■□□□ 1.26
GABBR1-215ENST00000488334 KCNH8Q96L42 1107 aa22.89■■□□□ 1.25
GABBR1-215ENST00000488334 CDK13Q14004 1512 aaKnown RBP22.88■■□□□ 1.25
GABBR1-215ENST00000488334 TROQ12816 1431 aaPredicted RBP22.82■■□□□ 1.24
GABBR1-215ENST00000488334 CD109Q6YHK3 1445 aa22.8■■□□□ 1.24
GABBR1-215ENST00000488334 CFAP43Q8NDM7 1665 aa22.8■■□□□ 1.24
GABBR1-215ENST00000488334 LRRIQ1Q96JM4 1722 aa22.79■■□□□ 1.24
GABBR1-215ENST00000488334 MAP3K4Q9Y6R4 1608 aa22.79■■□□□ 1.24
GABBR1-215ENST00000488334 MAP3K1Q13233 1512 aa22.78■■□□□ 1.24
GABBR1-215ENST00000488334 ABCA9Q8IUA7 1624 aa22.78■■□□□ 1.24
GABBR1-215ENST00000488334 TEX14Q8IWB6 1497 aa22.78■■□□□ 1.24
GABBR1-215ENST00000488334 APLP2Q06481 763 aa22.77■■□□□ 1.24
GABBR1-215ENST00000488334 MAGI3Q5TCQ9 1506 aa22.76■■□□□ 1.23
GABBR1-215ENST00000488334 MTUS2Q5JR59 1369 aa22.74■■□□□ 1.23
GABBR1-215ENST00000488334 PHLDB1Q86UU1 1377 aa22.74■■□□□ 1.23
GABBR1-215ENST00000488334 KIF14Q15058 1648 aa22.72■■□□□ 1.23
GABBR1-215ENST00000488334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.71■■□□□ 1.23
GABBR1-215ENST00000488334 TIAM1Q13009 1591 aa22.69■■□□□ 1.22
GABBR1-215ENST00000488334 EHBP1L1Q8N3D4 1523 aa22.67■■□□□ 1.22
GABBR1-215ENST00000488334 TSPOAP1O95153 1857 aa22.66■■□□□ 1.22
GABBR1-215ENST00000488334 ARAP3Q8WWN8 1544 aa22.66■■□□□ 1.22
GABBR1-215ENST00000488334 PLCH2O75038 1416 aa22.65■■□□□ 1.22
GABBR1-215ENST00000488334 PPRC1Q5VV67 1664 aaKnown RBP22.65■■□□□ 1.22
GABBR1-215ENST00000488334 NEO1Q92859 1461 aa22.64■■□□□ 1.21
GABBR1-215ENST00000488334 LRRC9Q6ZRR7 1453 aa22.63■■□□□ 1.21
GABBR1-215ENST00000488334 TTC37Q6PGP7 1564 aa22.62■■□□□ 1.21
GABBR1-215ENST00000488334 EFCAB2Q5VUJ9 269 aa22.61■■□□□ 1.21
GABBR1-215ENST00000488334 CFAP74Q9C0B2 1584 aa22.59■■□□□ 1.21
GABBR1-215ENST00000488334 MYO5CQ9NQX4 1742 aa22.57■■□□□ 1.2
GABBR1-215ENST00000488334 CCNB3Q8WWL7 1395 aa22.57■■□□□ 1.2
GABBR1-215ENST00000488334 FANCAO15360 1455 aa22.57■■□□□ 1.2
GABBR1-215ENST00000488334 SUPT6HQ7KZ85 1726 aaKnown RBP22.56■■□□□ 1.2
GABBR1-215ENST00000488334 KANK4Q5T7N3 995 aaPredicted RBP22.54■■□□□ 1.2
GABBR1-215ENST00000488334 AKNAQ7Z591 1439 aa22.54■■□□□ 1.2
GABBR1-215ENST00000488334 KDM6BO15054 1643 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms