RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
SHROOM1-205ENST00000488072 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
SHROOM1-205ENST00000488072 EEA1Q15075 1411 aa28.56■■■□□ 2.16
SHROOM1-205ENST00000488072 ERCC6L2Q5T890 1561 aa28.54■■■□□ 2.16
SHROOM1-205ENST00000488072 JPH4Q96JJ6 628 aa28.51■■■□□ 2.15
SHROOM1-205ENST00000488072 KIAA0586Q9BVV6 1533 aa28.49■■■□□ 2.15
SHROOM1-205ENST00000488072 CYB5RLQ6IPT4 315 aa28.44■■■□□ 2.14
SHROOM1-205ENST00000488072 ARAP1Q96P48 1450 aa28.44■■■□□ 2.14
SHROOM1-205ENST00000488072 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
SHROOM1-205ENST00000488072 SHROOM2Q13796 1616 aa28.43■■■□□ 2.14
SHROOM1-205ENST00000488072 IQGAP2Q13576 1575 aa28.35■■■□□ 2.13
SHROOM1-205ENST00000488072 KIF21BO75037 1637 aa28.31■■■□□ 2.12
SHROOM1-205ENST00000488072 TTBK1Q5TCY1 1321 aaPredicted RBP28.29■■■□□ 2.12
SHROOM1-205ENST00000488072 RANGAP1P46060 587 aaPredicted RBP28.29■■■□□ 2.12
SHROOM1-205ENST00000488072 CTTNBP2Q8WZ74 1663 aa28.25■■■□□ 2.11
SHROOM1-205ENST00000488072 DISP1Q96F81 1524 aa28.23■■■□□ 2.11
SHROOM1-205ENST00000488072 UBTFP17480 764 aaKnown RBP28.23■■■□□ 2.11
SHROOM1-205ENST00000488072 UGGT2Q9NYU1 1516 aa28.21■■■□□ 2.11
SHROOM1-205ENST00000488072 GOLGA3Q08378 1498 aa28.21■■■□□ 2.11
SHROOM1-205ENST00000488072 P3H3Q8IVL6 736 aa28.19■■■□□ 2.1
SHROOM1-205ENST00000488072 CARMIL2Q6F5E8 1435 aa28.13■■■□□ 2.09
SHROOM1-205ENST00000488072 KIAA0556O60303 1618 aa28.1■■■□□ 2.09
SHROOM1-205ENST00000488072 LOC105371045A0A1W2PR82 267 aa28.1■■■□□ 2.09
SHROOM1-205ENST00000488072 TNIKQ9UKE5 1360 aa28.1■■■□□ 2.09
SHROOM1-205ENST00000488072 PTPRGP23470 1445 aa28.09■■■□□ 2.09
SHROOM1-205ENST00000488072 FHOD3Q2V2M9 1422 aa27.98■■■□□ 2.07
SHROOM1-205ENST00000488072 SAMD9Q5K651 1589 aa27.98■■■□□ 2.07
SHROOM1-205ENST00000488072 ADCY10Q96PN6 1610 aa27.94■■■□□ 2.06
SHROOM1-205ENST00000488072 PLB1Q6P1J6 1458 aa27.92■■■□□ 2.06
SHROOM1-205ENST00000488072 ARHGAP35Q9NRY4 1499 aa27.89■■■□□ 2.06
SHROOM1-205ENST00000488072 UACAQ9BZF9 1416 aa27.89■■■□□ 2.06
SHROOM1-205ENST00000488072 ARID3CA6NKF2 412 aa27.86■■■□□ 2.05
SHROOM1-205ENST00000488072 EFCAB5A4FU69 1503 aa27.81■■■□□ 2.04
SHROOM1-205ENST00000488072 ABCC2Q92887 1545 aa27.81■■■□□ 2.04
SHROOM1-205ENST00000488072 ABCA8O94911 1581 aa27.8■■■□□ 2.04
SHROOM1-205ENST00000488072 UHRF1BP1LA0JNW5 1464 aa27.79■■■□□ 2.04
SHROOM1-205ENST00000488072 CLIP1P30622 1438 aa27.77■■■□□ 2.04
SHROOM1-205ENST00000488072 NPM1P06748 294 aaKnown RBP eCLIP27.77■■■□□ 2.04
SHROOM1-205ENST00000488072 TRHP20396 242 aaPredicted RBP27.76■■■□□ 2.03
SHROOM1-205ENST00000488072 CEP162Q5TB80 1403 aa27.71■■■□□ 2.03
SHROOM1-205ENST00000488072 KDM5BQ9UGL1 1544 aa27.69■■■□□ 2.02
SHROOM1-205ENST00000488072 RAPGEF6Q8TEU7 1601 aa27.66■■■□□ 2.02
SHROOM1-205ENST00000488072 ATP1B4Q9UN42 357 aaPredicted RBP27.65■■■□□ 2.02
SHROOM1-205ENST00000488072 ZCCHC11Q5TAX3 1644 aaKnown RBP27.65■■■□□ 2.02
SHROOM1-205ENST00000488072 NUP153P49790 1475 aaKnown RBP27.64■■■□□ 2.02
SHROOM1-205ENST00000488072 ATP10BO94823 1461 aa27.64■■■□□ 2.01
SHROOM1-205ENST00000488072 ASXL2Q76L83 1435 aa27.63■■■□□ 2.01
SHROOM1-205ENST00000488072 MAPKBP1O60336 1514 aa27.61■■■□□ 2.01
SHROOM1-205ENST00000488072 FMN1Q68DA7 1419 aa27.58■■■□□ 2
SHROOM1-205ENST00000488072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.57■■■□□ 2
SHROOM1-205ENST00000488072 HNRNPUL2Q1KMD3 747 aaKnown RBP27.57■■■□□ 2
SHROOM1-205ENST00000488072 FAM69CQ0P6D2 419 aa27.56■■■□□ 2
SHROOM1-205ENST00000488072 CDK13Q14004 1512 aaKnown RBP27.54■■■□□ 2
SHROOM1-205ENST00000488072 ABCC10Q5T3U5 1492 aa27.53■■■□□ 2
SHROOM1-205ENST00000488072 KCNH8Q96L42 1107 aa27.52■■■□□ 2
SHROOM1-205ENST00000488072 PCF11O94913 1555 aaKnown RBP27.51■■□□□ 1.99
SHROOM1-205ENST00000488072 DIP2BQ9P265 1576 aa27.49■■□□□ 1.99
SHROOM1-205ENST00000488072 WDR7Q9Y4E6 1490 aa27.47■■□□□ 1.99
SHROOM1-205ENST00000488072 CASKIN1Q8WXD9 1431 aa27.47■■□□□ 1.99
SHROOM1-205ENST00000488072 KIF13AQ9H1H9 1805 aa27.46■■□□□ 1.99
SHROOM1-205ENST00000488072 EPRSP07814 1512 aaKnown RBP27.45■■□□□ 1.98
SHROOM1-205ENST00000488072 HECW1Q76N89 1606 aa27.43■■□□□ 1.98
SHROOM1-205ENST00000488072 LRRIQ1Q96JM4 1722 aa27.42■■□□□ 1.98
SHROOM1-205ENST00000488072 PLEKHD1A6NEE1 506 aa27.36■■□□□ 1.97
SHROOM1-205ENST00000488072 FYCO1Q9BQS8 1478 aa27.35■■□□□ 1.97
SHROOM1-205ENST00000488072 VPS8Q8N3P4 1428 aa27.32■■□□□ 1.96
SHROOM1-205ENST00000488072 GLI2P10070 1586 aa27.31■■□□□ 1.96
SHROOM1-205ENST00000488072 MAGI3Q5TCQ9 1506 aa27.3■■□□□ 1.96
SHROOM1-205ENST00000488072 TSPOAP1O95153 1857 aa27.28■■□□□ 1.96
SHROOM1-205ENST00000488072 CCDC18Q5T9S5 1454 aa27.23■■□□□ 1.95
SHROOM1-205ENST00000488072 CD109Q6YHK3 1445 aa27.23■■□□□ 1.95
SHROOM1-205ENST00000488072 MAP3K4Q9Y6R4 1608 aa27.23■■□□□ 1.95
SHROOM1-205ENST00000488072 PPRC1Q5VV67 1664 aaKnown RBP27.22■■□□□ 1.95
SHROOM1-205ENST00000488072 TROQ12816 1431 aaPredicted RBP27.21■■□□□ 1.95
SHROOM1-205ENST00000488072 CDK11AQ9UQ88 783 aaPredicted RBP27.2■■□□□ 1.94
SHROOM1-205ENST00000488072 KIF14Q15058 1648 aa27.19■■□□□ 1.94
SHROOM1-205ENST00000488072 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.19■■□□□ 1.94
SHROOM1-205ENST00000488072 TTC37Q6PGP7 1564 aa27.17■■□□□ 1.94
SHROOM1-205ENST00000488072 ABCA9Q8IUA7 1624 aa27.16■■□□□ 1.94
SHROOM1-205ENST00000488072 KANK4Q5T7N3 995 aaPredicted RBP27.14■■□□□ 1.94
SHROOM1-205ENST00000488072 CFAP43Q8NDM7 1665 aa27.12■■□□□ 1.93
SHROOM1-205ENST00000488072 COL17A1Q9UMD9 1497 aaPredicted RBP27.1■■□□□ 1.93
SHROOM1-205ENST00000488072 TIAM1Q13009 1591 aa27.08■■□□□ 1.93
SHROOM1-205ENST00000488072 MTUS2Q5JR59 1369 aa27.08■■□□□ 1.93
SHROOM1-205ENST00000488072 TEX14Q8IWB6 1497 aa27.01■■□□□ 1.91
SHROOM1-205ENST00000488072 PLCH2O75038 1416 aa27■■□□□ 1.91
SHROOM1-205ENST00000488072 LRRC9Q6ZRR7 1453 aa27■■□□□ 1.91
SHROOM1-205ENST00000488072 EHBP1L1Q8N3D4 1523 aa26.98■■□□□ 1.91
SHROOM1-205ENST00000488072 PPARGC1BQ86YN6 1023 aaKnown RBP26.96■■□□□ 1.91
SHROOM1-205ENST00000488072 KDM6BO15054 1643 aa26.96■■□□□ 1.91
SHROOM1-205ENST00000488072 FANCAO15360 1455 aa26.95■■□□□ 1.91
SHROOM1-205ENST00000488072 APLP2Q06481 763 aa26.94■■□□□ 1.9
SHROOM1-205ENST00000488072 RAPGEF3O95398 923 aa26.93■■□□□ 1.9
SHROOM1-205ENST00000488072 MAP3K1Q13233 1512 aa26.93■■□□□ 1.9
SHROOM1-205ENST00000488072 GPATCH8Q9UKJ3 1502 aaKnown RBP26.93■■□□□ 1.9
SHROOM1-205ENST00000488072 AKNAQ7Z591 1439 aa26.92■■□□□ 1.9
SHROOM1-205ENST00000488072 NCOA2Q15596 1464 aa26.92■■□□□ 1.9
SHROOM1-205ENST00000488072 NEO1Q92859 1461 aa26.9■■□□□ 1.9
SHROOM1-205ENST00000488072 MYO5CQ9NQX4 1742 aa26.9■■□□□ 1.9
SHROOM1-205ENST00000488072 ARHGAP5Q13017 1502 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms