RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 ADAMTS12P58397 1594 aa17.85■□□□□ 0.45
HDLBP-242ENST00000488013 FBLN2P98095 1184 aa17.85■□□□□ 0.45
HDLBP-242ENST00000488013 PBRM1Q86U86 1689 aa17.84■□□□□ 0.45
HDLBP-242ENST00000488013 GRIN2AQ12879 1464 aa17.81■□□□□ 0.44
HDLBP-242ENST00000488013 TNIKQ9UKE5 1360 aa17.8■□□□□ 0.44
HDLBP-242ENST00000488013 LOC105371045A0A1W2PR82 267 aa17.79■□□□□ 0.44
HDLBP-242ENST00000488013 NUP160Q12769 1436 aa17.74■□□□□ 0.43
HDLBP-242ENST00000488013 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
HDLBP-242ENST00000488013 EHMT2Q96KQ7 1210 aa17.73■□□□□ 0.43
HDLBP-242ENST00000488013 KIAA0586Q9BVV6 1533 aa17.72■□□□□ 0.43
HDLBP-242ENST00000488013 JPH4Q96JJ6 628 aa17.64■□□□□ 0.41
HDLBP-242ENST00000488013 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
HDLBP-242ENST00000488013 IQGAP2Q13576 1575 aa17.59■□□□□ 0.41
HDLBP-242ENST00000488013 CLIP1P30622 1438 aa17.59■□□□□ 0.41
HDLBP-242ENST00000488013 CEP162Q5TB80 1403 aa17.59■□□□□ 0.41
HDLBP-242ENST00000488013 MSH5O43196 834 aa17.59■□□□□ 0.41
HDLBP-242ENST00000488013 CARMIL2Q6F5E8 1435 aa17.57■□□□□ 0.4
HDLBP-242ENST00000488013 UGGT2Q9NYU1 1516 aa17.56■□□□□ 0.4
HDLBP-242ENST00000488013 CHD1O14646 1710 aa17.55■□□□□ 0.4
HDLBP-242ENST00000488013 EFCAB5A4FU69 1503 aa17.54■□□□□ 0.4
HDLBP-242ENST00000488013 RANGAP1P46060 587 aaPredicted RBP17.53■□□□□ 0.4
HDLBP-242ENST00000488013 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
HDLBP-242ENST00000488013 CTTNBP2Q8WZ74 1663 aa17.52■□□□□ 0.39
HDLBP-242ENST00000488013 PRG4Q92954 1404 aaPredicted RBP17.49■□□□□ 0.39
HDLBP-242ENST00000488013 ARHGAP35Q9NRY4 1499 aa17.47■□□□□ 0.39
HDLBP-242ENST00000488013 FMN1Q68DA7 1419 aa17.45■□□□□ 0.38
HDLBP-242ENST00000488013 DISP1Q96F81 1524 aa17.44■□□□□ 0.38
HDLBP-242ENST00000488013 P3H3Q8IVL6 736 aa17.43■□□□□ 0.38
HDLBP-242ENST00000488013 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
HDLBP-242ENST00000488013 SAMD9Q5K651 1589 aa17.42■□□□□ 0.38
HDLBP-242ENST00000488013 PTPRGP23470 1445 aa17.4■□□□□ 0.38
HDLBP-242ENST00000488013 FHOD3Q2V2M9 1422 aa17.39■□□□□ 0.38
HDLBP-242ENST00000488013 ARAP1Q96P48 1450 aa17.39■□□□□ 0.37
HDLBP-242ENST00000488013 KIAA0556O60303 1618 aa17.39■□□□□ 0.37
HDLBP-242ENST00000488013 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
HDLBP-242ENST00000488013 APLP2Q06481 763 aa17.34■□□□□ 0.37
HDLBP-242ENST00000488013 CASKIN1Q8WXD9 1431 aa17.31■□□□□ 0.36
HDLBP-242ENST00000488013 TTBK1Q5TCY1 1321 aaPredicted RBP17.28■□□□□ 0.36
HDLBP-242ENST00000488013 UACAQ9BZF9 1416 aa17.28■□□□□ 0.36
HDLBP-242ENST00000488013 ARHGEF11O15085 1522 aa17.27■□□□□ 0.36
HDLBP-242ENST00000488013 FYCO1Q9BQS8 1478 aa17.27■□□□□ 0.36
HDLBP-242ENST00000488013 ATP1B4Q9UN42 357 aaPredicted RBP17.25■□□□□ 0.35
HDLBP-242ENST00000488013 ERCC6L2Q5T890 1561 aa17.23■□□□□ 0.35
HDLBP-242ENST00000488013 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
HDLBP-242ENST00000488013 UHRF1BP1LA0JNW5 1464 aa17.23■□□□□ 0.35
HDLBP-242ENST00000488013 CCDC18Q5T9S5 1454 aa17.21■□□□□ 0.35
HDLBP-242ENST00000488013 PLB1Q6P1J6 1458 aa17.21■□□□□ 0.35
HDLBP-242ENST00000488013 NPM1P06748 294 aaKnown RBP eCLIP17.2■□□□□ 0.34
HDLBP-242ENST00000488013 MAP3K1Q13233 1512 aa17.2■□□□□ 0.34
HDLBP-242ENST00000488013 ABCA8O94911 1581 aa17.19■□□□□ 0.34
HDLBP-242ENST00000488013 CYB5RLQ6IPT4 315 aa17.19■□□□□ 0.34
HDLBP-242ENST00000488013 ABCC2Q92887 1545 aa17.17■□□□□ 0.34
HDLBP-242ENST00000488013 HECW1Q76N89 1606 aa17.17■□□□□ 0.34
HDLBP-242ENST00000488013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
HDLBP-242ENST00000488013 HNRNPUL2Q1KMD3 747 aaKnown RBP17.16■□□□□ 0.34
HDLBP-242ENST00000488013 RAPGEF6Q8TEU7 1601 aa17.16■□□□□ 0.34
HDLBP-242ENST00000488013 NUP153P49790 1475 aaKnown RBP17.16■□□□□ 0.34
HDLBP-242ENST00000488013 EPRSP07814 1512 aaKnown RBP17.15■□□□□ 0.34
HDLBP-242ENST00000488013 PCF11O94913 1555 aaKnown RBP17.15■□□□□ 0.34
HDLBP-242ENST00000488013 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
HDLBP-242ENST00000488013 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
HDLBP-242ENST00000488013 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
HDLBP-242ENST00000488013 PLEKHD1A6NEE1 506 aa17.13■□□□□ 0.33
HDLBP-242ENST00000488013 KDM5BQ9UGL1 1544 aa17.11■□□□□ 0.33
HDLBP-242ENST00000488013 ATP10BO94823 1461 aa17.11■□□□□ 0.33
HDLBP-242ENST00000488013 MTUS2Q5JR59 1369 aa17.09■□□□□ 0.33
HDLBP-242ENST00000488013 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
HDLBP-242ENST00000488013 TIAM1Q13009 1591 aa17.06■□□□□ 0.32
HDLBP-242ENST00000488013 LRRC9Q6ZRR7 1453 aa17.05■□□□□ 0.32
HDLBP-242ENST00000488013 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
HDLBP-242ENST00000488013 ADCY10Q96PN6 1610 aa17.03■□□□□ 0.32
HDLBP-242ENST00000488013 KANK4Q5T7N3 995 aaPredicted RBP17.02■□□□□ 0.32
HDLBP-242ENST00000488013 CDK13Q14004 1512 aaKnown RBP17.01■□□□□ 0.31
HDLBP-242ENST00000488013 EHBP1L1Q8N3D4 1523 aa16.99■□□□□ 0.31
HDLBP-242ENST00000488013 CFAP43Q8NDM7 1665 aa16.97■□□□□ 0.31
HDLBP-242ENST00000488013 ASXL2Q76L83 1435 aa16.96■□□□□ 0.31
HDLBP-242ENST00000488013 WDR7Q9Y4E6 1490 aa16.96■□□□□ 0.31
HDLBP-242ENST00000488013 MAPKBP1O60336 1514 aa16.95■□□□□ 0.3
HDLBP-242ENST00000488013 ZCCHC11Q5TAX3 1644 aaKnown RBP16.93■□□□□ 0.3
HDLBP-242ENST00000488013 PPARGC1BQ86YN6 1023 aaKnown RBP16.92■□□□□ 0.3
HDLBP-242ENST00000488013 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
HDLBP-242ENST00000488013 NCOA2Q15596 1464 aa16.91■□□□□ 0.3
HDLBP-242ENST00000488013 CCNB3Q8WWL7 1395 aa16.9■□□□□ 0.3
HDLBP-242ENST00000488013 MAGI3Q5TCQ9 1506 aa16.89■□□□□ 0.29
HDLBP-242ENST00000488013 KIF14Q15058 1648 aa16.88■□□□□ 0.29
HDLBP-242ENST00000488013 SUPT6HQ7KZ85 1726 aaKnown RBP16.86■□□□□ 0.29
HDLBP-242ENST00000488013 LRRIQ1Q96JM4 1722 aa16.86■□□□□ 0.29
HDLBP-242ENST00000488013 MIA2Q96PC5 1412 aa16.86■□□□□ 0.29
HDLBP-242ENST00000488013 CFDP1Q9UEE9 299 aaPredicted RBP16.85■□□□□ 0.29
HDLBP-242ENST00000488013 MYOM3Q5VTT5 1437 aa16.85■□□□□ 0.29
HDLBP-242ENST00000488013 PHLDB1Q86UU1 1377 aa16.84■□□□□ 0.29
HDLBP-242ENST00000488013 ABCC10Q5T3U5 1492 aa16.84■□□□□ 0.29
HDLBP-242ENST00000488013 TRIM26Q12899 539 aaPredicted RBP16.83■□□□□ 0.28
HDLBP-242ENST00000488013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.82■□□□□ 0.28
HDLBP-242ENST00000488013 FAM69CQ0P6D2 419 aa16.82■□□□□ 0.28
HDLBP-242ENST00000488013 EFCAB2Q5VUJ9 269 aa16.82■□□□□ 0.28
HDLBP-242ENST00000488013 GPATCH8Q9UKJ3 1502 aaKnown RBP16.81■□□□□ 0.28
HDLBP-242ENST00000488013 PLCH2O75038 1416 aa16.81■□□□□ 0.28
HDLBP-242ENST00000488013 CD109Q6YHK3 1445 aa16.79■□□□□ 0.28
HDLBP-242ENST00000488013 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms