RNA–Protein interactions for RNA: ENST00000487433.6

PHF11-213, Transcript of PHD finger protein 11, humanhuman

TSL 5

Gene PHF11, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-213ENST00000487433 RIMBP3CA6NJZ7 1639 aa29.43■■■□□ 2.3
PHF11-213ENST00000487433 RIMBP3BA6NNM3 1639 aa29.43■■■□□ 2.3
PHF11-213ENST00000487433 RIMBP3Q9UFD9 1639 aa29.43■■■□□ 2.3
PHF11-213ENST00000487433 SHROOM2Q13796 1616 aa29.41■■■□□ 2.3
PHF11-213ENST00000487433 JPH4Q96JJ6 628 aa29.39■■■□□ 2.3
PHF11-213ENST00000487433 KIF21BO75037 1637 aa29.34■■■□□ 2.29
PHF11-213ENST00000487433 IQGAP2Q13576 1575 aa29.31■■■□□ 2.28
PHF11-213ENST00000487433 ERCC6L2Q5T890 1561 aa29.31■■■□□ 2.28
PHF11-213ENST00000487433 PRG4Q92954 1404 aaPredicted RBP29.31■■■□□ 2.28
PHF11-213ENST00000487433 ARAP1Q96P48 1450 aa29.27■■■□□ 2.28
PHF11-213ENST00000487433 CTTNBP2Q8WZ74 1663 aa29.26■■■□□ 2.27
PHF11-213ENST00000487433 EHMT2Q96KQ7 1210 aa29.2■■■□□ 2.26
PHF11-213ENST00000487433 GOLGA3Q08378 1498 aa29.2■■■□□ 2.26
PHF11-213ENST00000487433 CYB5RLQ6IPT4 315 aa29.19■■■□□ 2.26
PHF11-213ENST00000487433 UGGT2Q9NYU1 1516 aa29.19■■■□□ 2.26
PHF11-213ENST00000487433 DISP1Q96F81 1524 aa29.13■■■□□ 2.25
PHF11-213ENST00000487433 CARMIL2Q6F5E8 1435 aa29.11■■■□□ 2.25
PHF11-213ENST00000487433 UBTFP17480 764 aaKnown RBP29.11■■■□□ 2.25
PHF11-213ENST00000487433 KIAA0556O60303 1618 aa29.05■■■□□ 2.24
PHF11-213ENST00000487433 TNIKQ9UKE5 1360 aa29.02■■■□□ 2.24
PHF11-213ENST00000487433 PTPRGP23470 1445 aa28.99■■■□□ 2.23
PHF11-213ENST00000487433 RANGAP1P46060 587 aaPredicted RBP28.97■■■□□ 2.23
PHF11-213ENST00000487433 TTBK1Q5TCY1 1321 aaPredicted RBP28.95■■■□□ 2.23
PHF11-213ENST00000487433 SAMD9Q5K651 1589 aa28.95■■■□□ 2.22
PHF11-213ENST00000487433 P3H3Q8IVL6 736 aa28.92■■■□□ 2.22
PHF11-213ENST00000487433 LOC105371045A0A1W2PR82 267 aa28.85■■■□□ 2.21
PHF11-213ENST00000487433 EFCAB5A4FU69 1503 aa28.84■■■□□ 2.21
PHF11-213ENST00000487433 ADCY10Q96PN6 1610 aa28.81■■■□□ 2.2
PHF11-213ENST00000487433 FHOD3Q2V2M9 1422 aa28.81■■■□□ 2.2
PHF11-213ENST00000487433 UACAQ9BZF9 1416 aa28.8■■■□□ 2.2
PHF11-213ENST00000487433 ARHGAP35Q9NRY4 1499 aa28.79■■■□□ 2.2
PHF11-213ENST00000487433 UHRF1BP1LA0JNW5 1464 aa28.76■■■□□ 2.19
PHF11-213ENST00000487433 PLB1Q6P1J6 1458 aa28.75■■■□□ 2.19
PHF11-213ENST00000487433 ABCC2Q92887 1545 aa28.74■■■□□ 2.19
PHF11-213ENST00000487433 ABCA8O94911 1581 aa28.72■■■□□ 2.19
PHF11-213ENST00000487433 CLIP1P30622 1438 aa28.69■■■□□ 2.18
PHF11-213ENST00000487433 NPM1P06748 294 aaKnown RBP eCLIP28.68■■■□□ 2.18
PHF11-213ENST00000487433 CEP162Q5TB80 1403 aa28.63■■■□□ 2.17
PHF11-213ENST00000487433 KDM5BQ9UGL1 1544 aa28.62■■■□□ 2.17
PHF11-213ENST00000487433 RAPGEF6Q8TEU7 1601 aa28.6■■■□□ 2.17
PHF11-213ENST00000487433 FMN1Q68DA7 1419 aa28.59■■■□□ 2.17
PHF11-213ENST00000487433 MAPKBP1O60336 1514 aa28.57■■■□□ 2.16
PHF11-213ENST00000487433 ZCCHC11Q5TAX3 1644 aaKnown RBP28.54■■■□□ 2.16
PHF11-213ENST00000487433 NUP153P49790 1475 aaKnown RBP28.53■■■□□ 2.16
PHF11-213ENST00000487433 ARID3CA6NKF2 412 aa28.51■■■□□ 2.15
PHF11-213ENST00000487433 TRHP20396 242 aaPredicted RBP28.5■■■□□ 2.15
PHF11-213ENST00000487433 ATP10BO94823 1461 aa28.5■■■□□ 2.15
PHF11-213ENST00000487433 ASXL2Q76L83 1435 aa28.49■■■□□ 2.15
PHF11-213ENST00000487433 ABCC10Q5T3U5 1492 aa28.42■■■□□ 2.14
PHF11-213ENST00000487433 ATP1B4Q9UN42 357 aaPredicted RBP28.42■■■□□ 2.14
PHF11-213ENST00000487433 CASKIN1Q8WXD9 1431 aa28.42■■■□□ 2.14
PHF11-213ENST00000487433 HECW1Q76N89 1606 aa28.41■■■□□ 2.14
PHF11-213ENST00000487433 PCF11O94913 1555 aaKnown RBP28.41■■■□□ 2.14
PHF11-213ENST00000487433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.38■■■□□ 2.13
PHF11-213ENST00000487433 HNRNPUL2Q1KMD3 747 aaKnown RBP28.38■■■□□ 2.13
PHF11-213ENST00000487433 WDR7Q9Y4E6 1490 aa28.38■■■□□ 2.13
PHF11-213ENST00000487433 DIP2BQ9P265 1576 aa28.37■■■□□ 2.13
PHF11-213ENST00000487433 FAM69CQ0P6D2 419 aa28.36■■■□□ 2.13
PHF11-213ENST00000487433 EPRSP07814 1512 aaKnown RBP28.36■■■□□ 2.13
PHF11-213ENST00000487433 CDK13Q14004 1512 aaKnown RBP28.36■■■□□ 2.13
PHF11-213ENST00000487433 FYCO1Q9BQS8 1478 aa28.34■■■□□ 2.13
PHF11-213ENST00000487433 KIF13AQ9H1H9 1805 aa28.34■■■□□ 2.13
PHF11-213ENST00000487433 LRRIQ1Q96JM4 1722 aa28.29■■■□□ 2.12
PHF11-213ENST00000487433 KCNH8Q96L42 1107 aa28.27■■■□□ 2.12
PHF11-213ENST00000487433 GLI2P10070 1586 aa28.27■■■□□ 2.12
PHF11-213ENST00000487433 VPS8Q8N3P4 1428 aa28.26■■■□□ 2.12
PHF11-213ENST00000487433 PLEKHD1A6NEE1 506 aa28.26■■■□□ 2.11
PHF11-213ENST00000487433 CCDC18Q5T9S5 1454 aa28.24■■■□□ 2.11
PHF11-213ENST00000487433 CDK11AQ9UQ88 783 aaPredicted RBP28.19■■■□□ 2.1
PHF11-213ENST00000487433 MAP3K4Q9Y6R4 1608 aa28.14■■■□□ 2.09
PHF11-213ENST00000487433 TROQ12816 1431 aaPredicted RBP28.13■■■□□ 2.09
PHF11-213ENST00000487433 MAGI3Q5TCQ9 1506 aa28.11■■■□□ 2.09
PHF11-213ENST00000487433 ABCA9Q8IUA7 1624 aa28.1■■■□□ 2.09
PHF11-213ENST00000487433 CD109Q6YHK3 1445 aa28.09■■■□□ 2.09
PHF11-213ENST00000487433 CFAP43Q8NDM7 1665 aa28.09■■■□□ 2.09
PHF11-213ENST00000487433 TSPOAP1O95153 1857 aa28.08■■■□□ 2.09
PHF11-213ENST00000487433 PPRC1Q5VV67 1664 aaKnown RBP28.07■■■□□ 2.08
PHF11-213ENST00000487433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.06■■■□□ 2.08
PHF11-213ENST00000487433 KIF14Q15058 1648 aa28.03■■■□□ 2.08
PHF11-213ENST00000487433 TIAM1Q13009 1591 aa28.02■■■□□ 2.08
PHF11-213ENST00000487433 TTC37Q6PGP7 1564 aa28.01■■■□□ 2.07
PHF11-213ENST00000487433 MTUS2Q5JR59 1369 aa27.99■■■□□ 2.07
PHF11-213ENST00000487433 MAP3K1Q13233 1512 aa27.97■■■□□ 2.07
PHF11-213ENST00000487433 TEX14Q8IWB6 1497 aa27.97■■■□□ 2.07
PHF11-213ENST00000487433 EHBP1L1Q8N3D4 1523 aa27.95■■■□□ 2.06
PHF11-213ENST00000487433 LRRC9Q6ZRR7 1453 aa27.9■■■□□ 2.06
PHF11-213ENST00000487433 APLP2Q06481 763 aa27.9■■■□□ 2.06
PHF11-213ENST00000487433 KANK4Q5T7N3 995 aaPredicted RBP27.9■■■□□ 2.06
PHF11-213ENST00000487433 PLCH2O75038 1416 aa27.9■■■□□ 2.06
PHF11-213ENST00000487433 NEO1Q92859 1461 aa27.85■■■□□ 2.05
PHF11-213ENST00000487433 MYO5CQ9NQX4 1742 aa27.85■■■□□ 2.05
PHF11-213ENST00000487433 FANCAO15360 1455 aa27.83■■■□□ 2.05
PHF11-213ENST00000487433 COL17A1Q9UMD9 1497 aaPredicted RBP27.83■■■□□ 2.05
PHF11-213ENST00000487433 ARAP3Q8WWN8 1544 aa27.83■■■□□ 2.05
PHF11-213ENST00000487433 KDM6BO15054 1643 aa27.83■■■□□ 2.05
PHF11-213ENST00000487433 PHLDB1Q86UU1 1377 aa27.82■■■□□ 2.04
PHF11-213ENST00000487433 GPATCH8Q9UKJ3 1502 aaKnown RBP27.81■■■□□ 2.04
PHF11-213ENST00000487433 NCOA2Q15596 1464 aa27.8■■■□□ 2.04
PHF11-213ENST00000487433 SUPT6HQ7KZ85 1726 aaKnown RBP27.79■■■□□ 2.04
PHF11-213ENST00000487433 PREX2Q70Z35 1606 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms