RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 ZNF608Q9ULD9 1512 aaPredicted RBP11.41□□□□□ -0.58
CCNB3-206ENST00000487204 EIF4G3O43432 1585 aaKnown RBP11.41□□□□□ -0.58
CCNB3-206ENST00000487204 MAGI1Q96QZ7 1491 aaPredicted RBP11.4□□□□□ -0.58
CCNB3-206ENST00000487204 CLIP1P30622 1438 aa11.39□□□□□ -0.59
CCNB3-206ENST00000487204 ADAMTS12P58397 1594 aa11.37□□□□□ -0.59
CCNB3-206ENST00000487204 SNAPC4Q5SXM2 1469 aa11.35□□□□□ -0.59
CCNB3-206ENST00000487204 SYNJ2O15056 1496 aa11.34□□□□□ -0.59
CCNB3-206ENST00000487204 CHMP7Q8WUX9 453 aaPredicted RBP11.32□□□□□ -0.6
CCNB3-206ENST00000487204 GRIN2AQ12879 1464 aa11.31□□□□□ -0.6
CCNB3-206ENST00000487204 CTTNBP2Q8WZ74 1663 aa11.3□□□□□ -0.6
CCNB3-206ENST00000487204 EFCAB5A4FU69 1503 aa11.3□□□□□ -0.6
CCNB3-206ENST00000487204 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
CCNB3-206ENST00000487204 VPS8Q8N3P4 1428 aa11.29□□□□□ -0.6
CCNB3-206ENST00000487204 KIAA0586Q9BVV6 1533 aa11.28□□□□□ -0.6
CCNB3-206ENST00000487204 ARHGAP35Q9NRY4 1499 aa11.26□□□□□ -0.61
CCNB3-206ENST00000487204 RANGAP1P46060 587 aaPredicted RBP11.26□□□□□ -0.61
CCNB3-206ENST00000487204 IQGAP2Q13576 1575 aa11.25□□□□□ -0.61
CCNB3-206ENST00000487204 APLP2Q06481 763 aa11.25□□□□□ -0.61
CCNB3-206ENST00000487204 FBLN2P98095 1184 aa11.24□□□□□ -0.61
CCNB3-206ENST00000487204 NUP160Q12769 1436 aa11.24□□□□□ -0.61
CCNB3-206ENST00000487204 ARAP1Q96P48 1450 aa11.24□□□□□ -0.61
CCNB3-206ENST00000487204 FMN1Q68DA7 1419 aa11.22□□□□□ -0.61
CCNB3-206ENST00000487204 UGGT2Q9NYU1 1516 aa11.22□□□□□ -0.61
CCNB3-206ENST00000487204 SAMD9Q5K651 1589 aa11.2□□□□□ -0.62
CCNB3-206ENST00000487204 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
CCNB3-206ENST00000487204 CEP170Q5SW79 1584 aa11.18□□□□□ -0.62
CCNB3-206ENST00000487204 CARMIL2Q6F5E8 1435 aa11.18□□□□□ -0.62
CCNB3-206ENST00000487204 MAP3K1Q13233 1512 aa11.16□□□□□ -0.62
CCNB3-206ENST00000487204 TRIM26Q12899 539 aaPredicted RBP11.16□□□□□ -0.62
CCNB3-206ENST00000487204 JPH4Q96JJ6 628 aa11.16□□□□□ -0.62
CCNB3-206ENST00000487204 FHOD3Q2V2M9 1422 aa11.16□□□□□ -0.62
CCNB3-206ENST00000487204 CASKIN1Q8WXD9 1431 aa11.15□□□□□ -0.62
CCNB3-206ENST00000487204 FYCO1Q9BQS8 1478 aa11.14□□□□□ -0.63
CCNB3-206ENST00000487204 P3H3Q8IVL6 736 aa11.14□□□□□ -0.63
CCNB3-206ENST00000487204 CHD1O14646 1710 aa11.14□□□□□ -0.63
CCNB3-206ENST00000487204 MAPK8IP2Q13387 824 aaPredicted RBP11.12□□□□□ -0.63
CCNB3-206ENST00000487204 KIAA0556O60303 1618 aa11.12□□□□□ -0.63
CCNB3-206ENST00000487204 DISP1Q96F81 1524 aa11.11□□□□□ -0.63
CCNB3-206ENST00000487204 CCDC18Q5T9S5 1454 aa11.08□□□□□ -0.64
CCNB3-206ENST00000487204 PRG4Q92954 1404 aaPredicted RBP11.08□□□□□ -0.64
CCNB3-206ENST00000487204 PCF11O94913 1555 aaKnown RBP11.07□□□□□ -0.64
CCNB3-206ENST00000487204 SHROOM2Q13796 1616 aa11.07□□□□□ -0.64
CCNB3-206ENST00000487204 TIAM1Q13009 1591 aa11.07□□□□□ -0.64
CCNB3-206ENST00000487204 HECW1Q76N89 1606 aa11.06□□□□□ -0.64
CCNB3-206ENST00000487204 CLASP1Q7Z460 1538 aa11.06□□□□□ -0.64
CCNB3-206ENST00000487204 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
CCNB3-206ENST00000487204 ATP1B4Q9UN42 357 aaPredicted RBP11.06□□□□□ -0.64
CCNB3-206ENST00000487204 DMRT2Q9Y5R5 561 aa11.06□□□□□ -0.64
CCNB3-206ENST00000487204 PCGF6Q9BYE7 350 aa11.03□□□□□ -0.64
CCNB3-206ENST00000487204 LRRC9Q6ZRR7 1453 aa11.03□□□□□ -0.64
CCNB3-206ENST00000487204 CFAP43Q8NDM7 1665 aa11.03□□□□□ -0.64
CCNB3-206ENST00000487204 PTPRGP23470 1445 aa11.02□□□□□ -0.64
CCNB3-206ENST00000487204 PPARGC1BQ86YN6 1023 aaKnown RBP11.02□□□□□ -0.65
CCNB3-206ENST00000487204 CDK11AQ9UQ88 783 aaPredicted RBP11.02□□□□□ -0.65
CCNB3-206ENST00000487204 RAPGEF6Q8TEU7 1601 aa11.01□□□□□ -0.65
CCNB3-206ENST00000487204 EPRSP07814 1512 aaKnown RBP11□□□□□ -0.65
CCNB3-206ENST00000487204 KANK4Q5T7N3 995 aaPredicted RBP11□□□□□ -0.65
CCNB3-206ENST00000487204 MTUS2Q5JR59 1369 aa11□□□□□ -0.65
CCNB3-206ENST00000487204 EHBP1L1Q8N3D4 1523 aa10.98□□□□□ -0.65
CCNB3-206ENST00000487204 NUP153P49790 1475 aaKnown RBP10.97□□□□□ -0.65
CCNB3-206ENST00000487204 ABCA8O94911 1581 aa10.97□□□□□ -0.65
CCNB3-206ENST00000487204 PLB1Q6P1J6 1458 aa10.96□□□□□ -0.65
CCNB3-206ENST00000487204 UACAQ9BZF9 1416 aa10.96□□□□□ -0.65
CCNB3-206ENST00000487204 TTBK1Q5TCY1 1321 aaPredicted RBP10.96□□□□□ -0.65
CCNB3-206ENST00000487204 CNKSR2Q8WXI2 1034 aa10.95□□□□□ -0.66
CCNB3-206ENST00000487204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.94□□□□□ -0.66
CCNB3-206ENST00000487204 HNRNPUL2Q1KMD3 747 aaKnown RBP10.94□□□□□ -0.66
CCNB3-206ENST00000487204 UHRF1BP1LA0JNW5 1464 aa10.93□□□□□ -0.66
CCNB3-206ENST00000487204 RRBP1Q9P2E9 1410 aaKnown RBP10.93□□□□□ -0.66
CCNB3-206ENST00000487204 SUPT6HQ7KZ85 1726 aaKnown RBP10.92□□□□□ -0.66
CCNB3-206ENST00000487204 PLEKHD1A6NEE1 506 aa10.92□□□□□ -0.66
CCNB3-206ENST00000487204 ABCC2Q92887 1545 aa10.92□□□□□ -0.66
CCNB3-206ENST00000487204 CCNB3Q8WWL7 1395 aa10.91□□□□□ -0.66
CCNB3-206ENST00000487204 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCNB3-206ENST00000487204 CDK13Q14004 1512 aaKnown RBP10.91□□□□□ -0.66
CCNB3-206ENST00000487204 NCBP3Q53F19 620 aaKnown RBP10.91□□□□□ -0.66
CCNB3-206ENST00000487204 LRRIQ1Q96JM4 1722 aa10.91□□□□□ -0.66
CCNB3-206ENST00000487204 TROQ12816 1431 aaPredicted RBP10.91□□□□□ -0.66
CCNB3-206ENST00000487204 ATP10BO94823 1461 aa10.9□□□□□ -0.66
CCNB3-206ENST00000487204 ERCC6L2Q5T890 1561 aa10.9□□□□□ -0.67
CCNB3-206ENST00000487204 NCOA2Q15596 1464 aa10.89□□□□□ -0.67
CCNB3-206ENST00000487204 MYOM3Q5VTT5 1437 aa10.88□□□□□ -0.67
CCNB3-206ENST00000487204 ARHGEF11O15085 1522 aa10.88□□□□□ -0.67
CCNB3-206ENST00000487204 PHLDB1Q86UU1 1377 aa10.88□□□□□ -0.67
CCNB3-206ENST00000487204 MIA2Q96PC5 1412 aa10.87□□□□□ -0.67
CCNB3-206ENST00000487204 MAGI3Q5TCQ9 1506 aa10.86□□□□□ -0.67
CCNB3-206ENST00000487204 KDM5BQ9UGL1 1544 aa10.86□□□□□ -0.67
CCNB3-206ENST00000487204 ARID3CA6NKF2 412 aa10.86□□□□□ -0.67
CCNB3-206ENST00000487204 FGD6Q6ZV73 1430 aa10.85□□□□□ -0.67
CCNB3-206ENST00000487204 ADCY10Q96PN6 1610 aa10.84□□□□□ -0.67
CCNB3-206ENST00000487204 KIF14Q15058 1648 aa10.84□□□□□ -0.67
CCNB3-206ENST00000487204 NPM1P06748 294 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCNB3-206ENST00000487204 CACNB1Q02641 598 aaPredicted RBP10.83□□□□□ -0.68
CCNB3-206ENST00000487204 FAM50AQ14320 339 aaKnown RBP10.82□□□□□ -0.68
CCNB3-206ENST00000487204 TCOF1Q13428 1488 aaKnown RBP10.81□□□□□ -0.68
CCNB3-206ENST00000487204 ITSN2Q9NZM3 1697 aa10.8□□□□□ -0.68
CCNB3-206ENST00000487204 CFDP1Q9UEE9 299 aaPredicted RBP10.79□□□□□ -0.68
CCNB3-206ENST00000487204 ZCCHC11Q5TAX3 1644 aaKnown RBP10.79□□□□□ -0.68
CCNB3-206ENST00000487204 PTPN23Q9H3S7 1636 aa10.78□□□□□ -0.68
CCNB3-206ENST00000487204 RNF216Q9NWF9 866 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms