RNA–Protein interactions for RNA: ENST00000487186.5

FAAP20-213, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 3,576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-213ENST00000487186 ERICH6BQ5W0A0 696 aa19.28■□□□□ 0.68
FAAP20-213ENST00000487186 PKNOX2Q96KN3 472 aa19.28■□□□□ 0.68
FAAP20-213ENST00000487186 NBR1Q14596 966 aa19.25■□□□□ 0.67
FAAP20-213ENST00000487186 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
FAAP20-213ENST00000487186 CADPSQ9ULU8 1353 aa19.24■□□□□ 0.67
FAAP20-213ENST00000487186 NCAPD3P42695 1498 aa19.23■□□□□ 0.67
FAAP20-213ENST00000487186 MSH5O43196 834 aa19.21■□□□□ 0.67
FAAP20-213ENST00000487186 PLEKHG5O94827 1062 aa19.19■□□□□ 0.66
FAAP20-213ENST00000487186 RTL5Q5HYW3 569 aaPredicted RBP19.18■□□□□ 0.66
FAAP20-213ENST00000487186 RAD54L2Q9Y4B4 1467 aa19.18■□□□□ 0.66
FAAP20-213ENST00000487186 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
FAAP20-213ENST00000487186 VPS8Q8N3P4 1428 aa19.16■□□□□ 0.66
FAAP20-213ENST00000487186 CUX1P39880 1505 aa19.15■□□□□ 0.66
FAAP20-213ENST00000487186 PODXL2Q9NZ53 605 aa19.15■□□□□ 0.66
FAAP20-213ENST00000487186 CC2D2AQ9P2K1 1620 aa19.13■□□□□ 0.65
FAAP20-213ENST00000487186 HIRIP3Q9BW71 556 aaPredicted RBP19.13■□□□□ 0.65
FAAP20-213ENST00000487186 CNGB1Q14028 1251 aaPredicted RBP19.11■□□□□ 0.65
FAAP20-213ENST00000487186 CHIC2Q9UKJ5 165 aa19.1■□□□□ 0.65
FAAP20-213ENST00000487186 PEG3Q9GZU2 1588 aa19.1■□□□□ 0.65
FAAP20-213ENST00000487186 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
FAAP20-213ENST00000487186 CDK11AQ9UQ88 783 aaPredicted RBP19.08■□□□□ 0.65
FAAP20-213ENST00000487186 DAXXQ9UER7 740 aaPredicted RBP19.08■□□□□ 0.64
FAAP20-213ENST00000487186 FGD5Q6ZNL6 1462 aa19.08■□□□□ 0.64
FAAP20-213ENST00000487186 CFTRP13569 1480 aa19.07■□□□□ 0.64
FAAP20-213ENST00000487186 IL27Q8NEV9 243 aa19.06■□□□□ 0.64
FAAP20-213ENST00000487186 IGF1RP08069 1367 aa19.06■□□□□ 0.64
FAAP20-213ENST00000487186 FHOD3Q2V2M9 1422 aa19.01■□□□□ 0.63
FAAP20-213ENST00000487186 ARAP1Q96P48 1450 aa19■□□□□ 0.63
FAAP20-213ENST00000487186 KIF21BO75037 1637 aa19■□□□□ 0.63
FAAP20-213ENST00000487186 TOP2BQ02880 1626 aa19■□□□□ 0.63
FAAP20-213ENST00000487186 SIN3AQ96ST3 1273 aa18.98■□□□□ 0.63
FAAP20-213ENST00000487186 GLIPR1L2Q4G1C9 344 aa18.97■□□□□ 0.63
FAAP20-213ENST00000487186 TRIM52Q96A61 297 aa18.97■□□□□ 0.63
FAAP20-213ENST00000487186 FANCIQ9NVI1 1328 aa18.96■□□□□ 0.63
FAAP20-213ENST00000487186 HMGXB3Q12766 1538 aa18.96■□□□□ 0.62
FAAP20-213ENST00000487186 ZNF777Q9ULD5 760 aaPredicted RBP18.95■□□□□ 0.62
FAAP20-213ENST00000487186 RRP7BPQ9NSQ0 103 aa18.92■□□□□ 0.62
FAAP20-213ENST00000487186 PRXQ9BXM0 1461 aa18.9■□□□□ 0.62
FAAP20-213ENST00000487186 MTUS2Q5JR59 1369 aa18.88■□□□□ 0.61
FAAP20-213ENST00000487186 POLR3GLQ9BT43 218 aa18.86■□□□□ 0.61
FAAP20-213ENST00000487186 CCNB3Q8WWL7 1395 aa18.86■□□□□ 0.61
FAAP20-213ENST00000487186 ARHGAP35Q9NRY4 1499 aa18.85■□□□□ 0.61
FAAP20-213ENST00000487186 CHMP7Q8WUX9 453 aaPredicted RBP18.85■□□□□ 0.61
FAAP20-213ENST00000487186 NOP58Q9Y2X3 529 aaKnown RBP18.83■□□□□ 0.6
FAAP20-213ENST00000487186 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.62e-6■■□□□ 13.2
FAAP20-213ENST00000487186 TIMELESSQ9UNS1 1208 aa18.82■□□□□ 0.6
FAAP20-213ENST00000487186 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
FAAP20-213ENST00000487186 ZNF326Q5BKZ1 582 aaKnown RBP18.79■□□□□ 0.6
FAAP20-213ENST00000487186 VSIG10Q8N0Z9 540 aa18.78■□□□□ 0.6
FAAP20-213ENST00000487186 ERCC6Q03468 1493 aa18.77■□□□□ 0.6
FAAP20-213ENST00000487186 PDS5BQ9NTI5 1447 aa18.77■□□□□ 0.6
FAAP20-213ENST00000487186 DDX10Q13206 875 aaKnown RBP18.77■□□□□ 0.6
FAAP20-213ENST00000487186 TOPBP1Q92547 1522 aa18.76■□□□□ 0.59
FAAP20-213ENST00000487186 FOXD1Q16676 465 aa18.76■□□□□ 0.59
FAAP20-213ENST00000487186 PHLDB1Q86UU1 1377 aa18.73■□□□□ 0.59
FAAP20-213ENST00000487186 RAB3GAP2Q9H2M9 1393 aa18.73■□□□□ 0.59
FAAP20-213ENST00000487186 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
FAAP20-213ENST00000487186 IRX6P78412 446 aaPredicted RBP18.69■□□□□ 0.58
FAAP20-213ENST00000487186 DHX57Q6P158 1386 aaKnown RBP18.69■□□□□ 0.58
FAAP20-213ENST00000487186 KCNH8Q96L42 1107 aa18.68■□□□□ 0.58
FAAP20-213ENST00000487186 GAPVD1Q14C86 1478 aa18.67■□□□□ 0.58
FAAP20-213ENST00000487186 A0A0U1RQG5 324 aaPredicted RBP18.67■□□□□ 0.58
FAAP20-213ENST00000487186 URB2Q14146 1524 aaKnown RBP18.66■□□□□ 0.58
FAAP20-213ENST00000487186 SENP3-EIF4A1A0A087X0R7 540 aa18.65■□□□□ 0.58
FAAP20-213ENST00000487186 ERICH3Q5RHP9 1530 aa18.64■□□□□ 0.57
FAAP20-213ENST00000487186 ZMYND15Q9H091 742 aa18.64■□□□□ 0.57
FAAP20-213ENST00000487186 ANP32AP39687 249 aaKnown RBP18.63■□□□□ 0.57
FAAP20-213ENST00000487186 ZBTB47Q9UFB7 747 aaPredicted RBP18.63■□□□□ 0.57
FAAP20-213ENST00000487186 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
FAAP20-213ENST00000487186 PAK3O75914 559 aaPredicted RBP18.6■□□□□ 0.57
FAAP20-213ENST00000487186 ZNF644Q9H582 1327 aaPredicted RBP18.57■□□□□ 0.56
FAAP20-213ENST00000487186 NEFMP07197 916 aa18.56■□□□□ 0.56
FAAP20-213ENST00000487186 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
FAAP20-213ENST00000487186 DNMBPQ6XZF7 1577 aa18.54■□□□□ 0.56
FAAP20-213ENST00000487186 RSPH6AQ9H0K4 717 aa18.53■□□□□ 0.56
FAAP20-213ENST00000487186 SETD5Q9C0A6 1442 aa18.53■□□□□ 0.56
FAAP20-213ENST00000487186 ZNF608Q9ULD9 1512 aaPredicted RBP18.53■□□□□ 0.56
FAAP20-213ENST00000487186 LRRC9Q6ZRR7 1453 aa18.52■□□□□ 0.56
FAAP20-213ENST00000487186 BRPF3Q9ULD4 1205 aa18.5■□□□□ 0.55
FAAP20-213ENST00000487186 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.55
FAAP20-213ENST00000487186 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
FAAP20-213ENST00000487186 CFDP1Q9UEE9 299 aaPredicted RBP18.47■□□□□ 0.55
FAAP20-213ENST00000487186 FMN1Q68DA7 1419 aa18.47■□□□□ 0.55
FAAP20-213ENST00000487186 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
FAAP20-213ENST00000487186 PCF11O94913 1555 aaKnown RBP18.45■□□□□ 0.54
FAAP20-213ENST00000487186 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
FAAP20-213ENST00000487186 KDM2AQ9Y2K7 1162 aa18.45■□□□□ 0.54
FAAP20-213ENST00000487186 LAS1LQ9Y4W2 734 aaKnown RBP18.45■□□□□ 0.54
FAAP20-213ENST00000487186 JPH4Q96JJ6 628 aa18.43■□□□□ 0.54
FAAP20-213ENST00000487186 RRBP1Q9P2E9 1410 aaKnown RBP18.42■□□□□ 0.54
FAAP20-213ENST00000487186 NPM2Q86SE8 214 aaKnown RBP18.41■□□□□ 0.54
FAAP20-213ENST00000487186 TIAM1Q13009 1591 aa18.41■□□□□ 0.54
FAAP20-213ENST00000487186 PDE4CQ08493 712 aa18.38■□□□□ 0.53
FAAP20-213ENST00000487186 PLEKHD1A6NEE1 506 aa18.38■□□□□ 0.53
FAAP20-213ENST00000487186 IPO9Q96P70 1041 aaKnown RBP18.38■□□□□ 0.53
FAAP20-213ENST00000487186 KIF21AQ7Z4S6 1674 aa18.37■□□□□ 0.53
FAAP20-213ENST00000487186 CDK13Q14004 1512 aaKnown RBP18.36■□□□□ 0.53
FAAP20-213ENST00000487186 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
FAAP20-213ENST00000487186 ANP32CO43423 234 aa18.36■□□□□ 0.53
FAAP20-213ENST00000487186 B4GALNT3Q6L9W6 998 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms