RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 KDM6BO15054 1643 aa9.63□□□□□ -0.87
SF1-217ENST00000486960 TULP1O00294 542 aaPredicted RBP9.59□□□□□ -0.87
SF1-217ENST00000486960 GAPVD1Q14C86 1478 aa9.59□□□□□ -0.87
SF1-217ENST00000486960 PEG3Q9GZU2 1588 aa9.58□□□□□ -0.88
SF1-217ENST00000486960 MAPK8IP2Q13387 824 aaPredicted RBP9.55□□□□□ -0.88
SF1-217ENST00000486960 IFT140Q96RY7 1462 aa9.54□□□□□ -0.88
SF1-217ENST00000486960 TSPOAP1O95153 1857 aa9.54□□□□□ -0.88
SF1-217ENST00000486960 TPRNQ4KMQ1 711 aa9.53□□□□□ -0.88
SF1-217ENST00000486960 FBLN2P98095 1184 aa9.51□□□□□ -0.89
SF1-217ENST00000486960 PLCB2Q00722 1185 aa9.51□□□□□ -0.89
SF1-217ENST00000486960 AQRO60306 1485 aaKnown RBP eCLIP9.5□□□□□ -0.892e-15■■■□□ 15.5
SF1-217ENST00000486960 DIP2BQ9P265 1576 aa9.47□□□□□ -0.89
SF1-217ENST00000486960 SYNJ1O43426 1573 aa9.46□□□□□ -0.9
SF1-217ENST00000486960 TARBP1Q13395 1621 aaKnown RBP9.45□□□□□ -0.9
SF1-217ENST00000486960 ABCC10Q5T3U5 1492 aa9.43□□□□□ -0.9
SF1-217ENST00000486960 HAP1P54257 671 aaPredicted RBP9.42□□□□□ -0.9
SF1-217ENST00000486960 CNKSR2Q8WXI2 1034 aa9.42□□□□□ -0.9
SF1-217ENST00000486960 GTF3C3Q9Y5Q9 886 aa9.41□□□□□ -0.9
SF1-217ENST00000486960 DMRT2Q9Y5R5 561 aa9.41□□□□□ -0.9
SF1-217ENST00000486960 FAM69CQ0P6D2 419 aa9.39□□□□□ -0.91
SF1-217ENST00000486960 CFTRP13569 1480 aa9.39□□□□□ -0.91
SF1-217ENST00000486960 PPRC1Q5VV67 1664 aaKnown RBP9.38□□□□□ -0.91
SF1-217ENST00000486960 PRDM2Q13029 1718 aa9.36□□□□□ -0.91
SF1-217ENST00000486960 TOPBP1Q92547 1522 aa9.36□□□□□ -0.91
SF1-217ENST00000486960 SNAPC4Q5SXM2 1469 aa9.36□□□□□ -0.91
SF1-217ENST00000486960 CERKQ8TCT0 537 aa9.36□□□□□ -0.91
SF1-217ENST00000486960 MROH2BQ7Z745 1585 aa9.34□□□□□ -0.91
SF1-217ENST00000486960 COL17A1Q9UMD9 1497 aaPredicted RBP9.32□□□□□ -0.92
SF1-217ENST00000486960 SRCAPQ6ZRS2 3230 aa9.31□□□□□ -0.92
SF1-217ENST00000486960 PODXL2Q9NZ53 605 aa9.31□□□□□ -0.92
SF1-217ENST00000486960 VSIG10Q8N0Z9 540 aa9.3□□□□□ -0.92
SF1-217ENST00000486960 MAPKBP1O60336 1514 aa9.3□□□□□ -0.92
SF1-217ENST00000486960 TOP2BQ02880 1626 aa9.29□□□□□ -0.92
SF1-217ENST00000486960 CEP170Q5SW79 1584 aa9.29□□□□□ -0.92
SF1-217ENST00000486960 PCF11O94913 1555 aaKnown RBP9.28□□□□□ -0.92
SF1-217ENST00000486960 SHROOM2Q13796 1616 aa9.23□□□□□ -0.93
SF1-217ENST00000486960 ZBTB22O15209 634 aa9.23□□□□□ -0.93
SF1-217ENST00000486960 NPM3O75607 178 aaKnown RBP9.23□□□□□ -0.93
SF1-217ENST00000486960 RNF216Q9NWF9 866 aaPredicted RBP9.23□□□□□ -0.93
SF1-217ENST00000486960 MAGI1Q96QZ7 1491 aaPredicted RBP9.22□□□□□ -0.93
SF1-217ENST00000486960 DNMBPQ6XZF7 1577 aa9.22□□□□□ -0.93
SF1-217ENST00000486960 CHMP7Q8WUX9 453 aaPredicted RBP9.22□□□□□ -0.93
SF1-217ENST00000486960 WIZO95785 1651 aa9.22□□□□□ -0.93
SF1-217ENST00000486960 TDRD9Q8NDG6 1382 aaKnown RBP9.22□□□□□ -0.93
SF1-217ENST00000486960 RAD54L2Q9Y4B4 1467 aa9.21□□□□□ -0.93
SF1-217ENST00000486960 KIF21BO75037 1637 aa9.21□□□□□ -0.93
SF1-217ENST00000486960 ADCY10Q96PN6 1610 aa9.21□□□□□ -0.93
SF1-217ENST00000486960 POLA1P09884 1462 aaPredicted RBP9.2□□□□□ -0.94
SF1-217ENST00000486960 DCAF8L1A6NGE4 600 aa9.19□□□□□ -0.94
SF1-217ENST00000486960 MED1Q15648 1581 aaPredicted RBP9.19□□□□□ -0.94
SF1-217ENST00000486960 PBRM1Q86U86 1689 aa9.17□□□□□ -0.94
SF1-217ENST00000486960 PTPRMP28827 1452 aa9.17□□□□□ -0.94
SF1-217ENST00000486960 TMEM132AQ24JP5 1023 aa9.17□□□□□ -0.94
SF1-217ENST00000486960 KLHL34Q8N239 644 aa9.17□□□□□ -0.94
SF1-217ENST00000486960 ADAMTSL3P82987 1691 aa9.16□□□□□ -0.94
SF1-217ENST00000486960 HOXD11P31277 338 aaPredicted RBP9.16□□□□□ -0.94
SF1-217ENST00000486960 FKBP8Q14318 412 aa9.16□□□□□ -0.94
SF1-217ENST00000486960 HSPA2P54652 639 aa9.15□□□□□ -0.94
SF1-217ENST00000486960 NPM2Q86SE8 214 aaKnown RBP9.15□□□□□ -0.94
SF1-217ENST00000486960 C14orf37Q86TY3 774 aa9.15□□□□□ -0.94
SF1-217ENST00000486960 FBXO3Q9UK99 471 aa9.14□□□□□ -0.95
SF1-217ENST00000486960 WDR97A6NE52 1622 aa9.11□□□□□ -0.95
SF1-217ENST00000486960 GRIN2BQ13224 1484 aa9.09□□□□□ -0.95
SF1-217ENST00000486960 ABCC8Q09428 1581 aa9.09□□□□□ -0.95
SF1-217ENST00000486960 EIF5BO60841 1220 aaKnown RBP9.08□□□□□ -0.96
SF1-217ENST00000486960 MADDQ8WXG6 1647 aa9.08□□□□□ -0.96
SF1-217ENST00000486960 STRCQ7RTU9 1775 aa9.07□□□□□ -0.96
SF1-217ENST00000486960 GLI2P10070 1586 aa9.06□□□□□ -0.96
SF1-217ENST00000486960 NUP160Q12769 1436 aa9.05□□□□□ -0.96
SF1-217ENST00000486960 MAP3K4Q9Y6R4 1608 aa9.05□□□□□ -0.96
SF1-217ENST00000486960 SOGA1O94964 1423 aa9.04□□□□□ -0.96
SF1-217ENST00000486960 GRIN2AQ12879 1464 aa9.03□□□□□ -0.96
SF1-217ENST00000486960 LTBP4Q8N2S1 1624 aa9.02□□□□□ -0.96
SF1-217ENST00000486960 BCORL1Q5H9F3 1711 aa9.02□□□□□ -0.97
SF1-217ENST00000486960 RIMS1Q86UR5 1692 aaKnown RBP9.01□□□□□ -0.97
SF1-217ENST00000486960 PRG4Q92954 1404 aaPredicted RBP9.01□□□□□ -0.97
SF1-217ENST00000486960 SETD1AO15047 1707 aaKnown RBP9□□□□□ -0.97
SF1-217ENST00000486960 NPM1P06748 294 aaKnown RBP eCLIP8.99□□□□□ -0.97
SF1-217ENST00000486960 FGD5Q6ZNL6 1462 aa8.97□□□□□ -0.97
SF1-217ENST00000486960 KDM2AQ9Y2K7 1162 aa8.97□□□□□ -0.97
SF1-217ENST00000486960 ADAMTS12P58397 1594 aa8.96□□□□□ -0.97
SF1-217ENST00000486960 ABCA5Q8WWZ7 1642 aa8.96□□□□□ -0.98
SF1-217ENST00000486960 CUL7Q14999 1698 aa8.95□□□□□ -0.98
SF1-217ENST00000486960 IQSEC2Q5JU85 1478 aa8.93□□□□□ -0.98
SF1-217ENST00000486960 ASXL2Q76L83 1435 aa8.92□□□□□ -0.98
SF1-217ENST00000486960 FOXD4L1Q9NU39 408 aa8.92□□□□□ -0.98
SF1-217ENST00000486960 TOP2AP11388 1531 aaKnown RBP8.91□□□□□ -0.98
SF1-217ENST00000486960 ABCC2Q92887 1545 aa8.9□□□□□ -0.98
SF1-217ENST00000486960 TEX14Q8IWB6 1497 aa8.9□□□□□ -0.98
SF1-217ENST00000486960 EPRSP07814 1512 aaKnown RBP8.9□□□□□ -0.99
SF1-217ENST00000486960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.89□□□□□ -0.997e-13■■■■□ 24.8
SF1-217ENST00000486960 RGS17Q9UGC6 210 aaPredicted RBP8.89□□□□□ -0.99
SF1-217ENST00000486960 TRIM26Q12899 539 aaPredicted RBP8.88□□□□□ -0.99
SF1-217ENST00000486960 RUSC2Q8N2Y8 1516 aa8.88□□□□□ -0.99
SF1-217ENST00000486960 HSPA1LP34931 641 aa8.87□□□□□ -0.99
SF1-217ENST00000486960 KIAA0586Q9BVV6 1533 aa8.86□□□□□ -0.99
SF1-217ENST00000486960 PREX1Q8TCU6 1659 aa8.86□□□□□ -0.99
SF1-217ENST00000486960 SUPT5HO00267 1087 aaKnown RBP8.86□□□□□ -0.99
SF1-217ENST00000486960 SIGLEC1Q9BZZ2 1709 aa8.85□□□□□ -0.99
SF1-217ENST00000486960 PLB1Q6P1J6 1458 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms