RNA–Protein interactions for RNA: ENST00000486757.1

CTSE-204, Transcript of cathepsin E, humanhuman

TSL 5

Gene CTSE, Length 435 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-204ENST00000486757 ANP32CO43423 234 aa10.72□□□□□ -0.69
CTSE-204ENST00000486757 WASHC2CQ9Y4E1 1318 aa10.72□□□□□ -0.69
CTSE-204ENST00000486757 CCNB3Q8WWL7 1395 aa10.72□□□□□ -0.69
CTSE-204ENST00000486757 NCAPD3P42695 1498 aa10.72□□□□□ -0.69
CTSE-204ENST00000486757 SMARCA4P51532 1647 aa10.72□□□□□ -0.69
CTSE-204ENST00000486757 PEG3Q9GZU2 1588 aa10.7□□□□□ -0.7
CTSE-204ENST00000486757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.69□□□□□ -0.7
CTSE-204ENST00000486757 KCNH8Q96L42 1107 aa10.69□□□□□ -0.7
CTSE-204ENST00000486757 ARAP1Q96P48 1450 aa10.68□□□□□ -0.7
CTSE-204ENST00000486757 PRXQ9BXM0 1461 aa10.68□□□□□ -0.7
CTSE-204ENST00000486757 RTL5Q5HYW3 569 aaPredicted RBP10.67□□□□□ -0.7
CTSE-204ENST00000486757 WDR97A6NE52 1622 aa10.66□□□□□ -0.7
CTSE-204ENST00000486757 IPO9Q96P70 1041 aaKnown RBP10.66□□□□□ -0.7
CTSE-204ENST00000486757 SALL2Q9Y467 1007 aaPredicted RBP10.66□□□□□ -0.7
CTSE-204ENST00000486757 SETD5Q9C0A6 1442 aa10.66□□□□□ -0.7
CTSE-204ENST00000486757 RAPGEF2Q9Y4G8 1499 aa10.64□□□□□ -0.71
CTSE-204ENST00000486757 RAB3GAP2Q9H2M9 1393 aa10.64□□□□□ -0.71
CTSE-204ENST00000486757 RNF123Q5XPI4 1314 aa10.63□□□□□ -0.71
CTSE-204ENST00000486757 ITGAEP38570 1179 aa10.63□□□□□ -0.71
CTSE-204ENST00000486757 FHAD1B1AJZ9 1412 aa10.63□□□□□ -0.71
CTSE-204ENST00000486757 ANP32AP39687 249 aaKnown RBP10.62□□□□□ -0.71
CTSE-204ENST00000486757 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
CTSE-204ENST00000486757 DDX10Q13206 875 aaKnown RBP10.61□□□□□ -0.71
CTSE-204ENST00000486757 CCDC136Q96JN2 1154 aa10.61□□□□□ -0.71
CTSE-204ENST00000486757 ZBED9Q6R2W3 1325 aa10.59□□□□□ -0.71
CTSE-204ENST00000486757 PPM1GO15355 546 aaPredicted RBP10.59□□□□□ -0.71
CTSE-204ENST00000486757 RSPH6AQ9H0K4 717 aa10.59□□□□□ -0.71
CTSE-204ENST00000486757 TOP2BQ02880 1626 aa10.58□□□□□ -0.72
CTSE-204ENST00000486757 BIVM-ERCC5R4GMW8 1640 aa10.58□□□□□ -0.72
CTSE-204ENST00000486757 ZBTB47Q9UFB7 747 aaPredicted RBP10.57□□□□□ -0.72
CTSE-204ENST00000486757 TRIM52Q96A61 297 aa10.56□□□□□ -0.72
CTSE-204ENST00000486757 SMG6Q86US8 1419 aaKnown RBP10.55□□□□□ -0.72
CTSE-204ENST00000486757 TIAM1Q13009 1591 aa10.55□□□□□ -0.72
CTSE-204ENST00000486757 UNC13AQ9UPW8 1703 aa10.55□□□□□ -0.72
CTSE-204ENST00000486757 PAK3O75914 559 aaPredicted RBP10.54□□□□□ -0.72
CTSE-204ENST00000486757 ABCA5Q8WWZ7 1642 aa10.52□□□□□ -0.73
CTSE-204ENST00000486757 MS4A1P11836 297 aa10.52□□□□□ -0.73
CTSE-204ENST00000486757 GLIPR1L2Q4G1C9 344 aa10.52□□□□□ -0.73
CTSE-204ENST00000486757 PLPPR3Q6T4P5 718 aa10.52□□□□□ -0.73
CTSE-204ENST00000486757 HNRNPUQ00839 825 aaKnown RBP eCLIP10.51□□□□□ -0.73
CTSE-204ENST00000486757 IL27Q8NEV9 243 aa10.51□□□□□ -0.73
CTSE-204ENST00000486757 KANK4Q5T7N3 995 aaPredicted RBP10.5□□□□□ -0.73
CTSE-204ENST00000486757 FAM43AQ8N2R8 423 aa10.5□□□□□ -0.73
CTSE-204ENST00000486757 CNTLNQ9NXG0 1405 aa10.5□□□□□ -0.73
CTSE-204ENST00000486757 ARHGAP35Q9NRY4 1499 aa10.49□□□□□ -0.73
CTSE-204ENST00000486757 KDM5BQ9UGL1 1544 aa10.48□□□□□ -0.73
CTSE-204ENST00000486757 CFAP43Q8NDM7 1665 aa10.48□□□□□ -0.73
CTSE-204ENST00000486757 TCERG1O14776 1098 aaKnown RBP10.48□□□□□ -0.73
CTSE-204ENST00000486757 EIF5BO60841 1220 aaKnown RBP10.48□□□□□ -0.73
CTSE-204ENST00000486757 NBR1Q14596 966 aa10.48□□□□□ -0.73
CTSE-204ENST00000486757 PKNOX2Q96KN3 472 aa10.48□□□□□ -0.73
CTSE-204ENST00000486757 LRRC9Q6ZRR7 1453 aa10.48□□□□□ -0.73
CTSE-204ENST00000486757 UACAQ9BZF9 1416 aa10.47□□□□□ -0.73
CTSE-204ENST00000486757 CCDC18Q5T9S5 1454 aa10.45□□□□□ -0.74
CTSE-204ENST00000486757 DDRGK1Q96HY6 314 aa10.45□□□□□ -0.74
CTSE-204ENST00000486757 TONSLQ96HA7 1378 aa10.44□□□□□ -0.74
CTSE-204ENST00000486757 GSE1Q14687 1217 aa10.44□□□□□ -0.74
CTSE-204ENST00000486757 AQRO60306 1485 aaKnown RBP eCLIP10.43□□□□□ -0.74
CTSE-204ENST00000486757 HFM1A2PYH4 1435 aa10.43□□□□□ -0.74
CTSE-204ENST00000486757 DNAJC5BQ9UF47 199 aa10.43□□□□□ -0.74
CTSE-204ENST00000486757 POLR1AO95602 1720 aaPredicted RBP10.43□□□□□ -0.74
CTSE-204ENST00000486757 NCOA1Q15788 1441 aa10.42□□□□□ -0.74
CTSE-204ENST00000486757 BICRAQ9NZM4 1560 aa10.42□□□□□ -0.74
CTSE-204ENST00000486757 B4GALNT3Q6L9W6 998 aa10.41□□□□□ -0.74
CTSE-204ENST00000486757 AKNAQ7Z591 1439 aa10.41□□□□□ -0.74
CTSE-204ENST00000486757 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
CTSE-204ENST00000486757 NEFMP07197 916 aa10.4□□□□□ -0.74
CTSE-204ENST00000486757 DAXXQ9UER7 740 aaPredicted RBP10.4□□□□□ -0.74
CTSE-204ENST00000486757 NUDCQ9Y266 331 aa10.4□□□□□ -0.74
CTSE-204ENST00000486757 INSRP06213 1382 aa10.39□□□□□ -0.75
CTSE-204ENST00000486757 PRKRIP1Q9H875 184 aaPredicted RBP10.39□□□□□ -0.75
CTSE-204ENST00000486757 ZMYM4Q5VZL5 1548 aa10.38□□□□□ -0.75
CTSE-204ENST00000486757 PABPN1Q86U42 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
CTSE-204ENST00000486757 BACH2Q9BYV9 841 aa10.37□□□□□ -0.75
CTSE-204ENST00000486757 PHLDB1Q86UU1 1377 aa10.37□□□□□ -0.75
CTSE-204ENST00000486757 ARID4BQ4LE39 1312 aaPredicted RBP10.36□□□□□ -0.75
CTSE-204ENST00000486757 SIN3AQ96ST3 1273 aa10.36□□□□□ -0.75
CTSE-204ENST00000486757 FYCO1Q9BQS8 1478 aa10.36□□□□□ -0.75
CTSE-204ENST00000486757 RRP9O43818 475 aaKnown RBP10.35□□□□□ -0.75
CTSE-204ENST00000486757 KTN1Q86UP2 1357 aaKnown RBP10.35□□□□□ -0.75
CTSE-204ENST00000486757 PTPN23Q9H3S7 1636 aa10.34□□□□□ -0.75
CTSE-204ENST00000486757 CCDC7Q96M83 1385 aa10.34□□□□□ -0.75
CTSE-204ENST00000486757 HECW1Q76N89 1606 aa10.33□□□□□ -0.76
CTSE-204ENST00000486757 IRX6P78412 446 aaPredicted RBP10.33□□□□□ -0.76
CTSE-204ENST00000486757 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
CTSE-204ENST00000486757 EFCAB5A4FU69 1503 aa10.33□□□□□ -0.76
CTSE-204ENST00000486757 MIA2Q96PC5 1412 aa10.33□□□□□ -0.76
CTSE-204ENST00000486757 CENPJQ9HC77 1338 aaPredicted RBP10.33□□□□□ -0.76
CTSE-204ENST00000486757 PDE4AP27815 886 aa10.31□□□□□ -0.76
CTSE-204ENST00000486757 EIF4G2P78344 907 aaKnown RBP eCLIP10.31□□□□□ -0.76
CTSE-204ENST00000486757 FMN1Q68DA7 1419 aa10.31□□□□□ -0.76
CTSE-204ENST00000486757 SPATA31E1Q6ZUB1 1445 aa10.31□□□□□ -0.76
CTSE-204ENST00000486757 CUX1P39880 1505 aa10.3□□□□□ -0.76
CTSE-204ENST00000486757 BRPF3Q9ULD4 1205 aa10.3□□□□□ -0.76
CTSE-204ENST00000486757 PDE3BQ13370 1112 aa10.29□□□□□ -0.76
CTSE-204ENST00000486757 FGD6Q6ZV73 1430 aa10.29□□□□□ -0.76
CTSE-204ENST00000486757 CASKIN1Q8WXD9 1431 aa10.29□□□□□ -0.76
CTSE-204ENST00000486757 LRPPRCP42704 1394 aaKnown RBP10.28□□□□□ -0.76
CTSE-204ENST00000486757 THOC2Q8NI27 1593 aaKnown RBP10.28□□□□□ -0.76
CTSE-204ENST00000486757 CCDC144AA2RUR9 1427 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms