RNA–Protein interactions for RNA: ENST00000486757.1

CTSE-204, Transcript of cathepsin E, humanhuman

TSL 5

Gene CTSE, Length 435 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-204ENST00000486757 NISCHQ9Y2I1 1504 aa14.29□□□□□ -0.12
CTSE-204ENST00000486757 AEBP2Q6ZN18 517 aaPredicted RBP13.6□□□□□ -0.23
CTSE-204ENST00000486757 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
CTSE-204ENST00000486757 HRCP23327 699 aa13.2□□□□□ -0.3
CTSE-204ENST00000486757 MYT1Q01538 1121 aa13.14□□□□□ -0.31
CTSE-204ENST00000486757 CHIC1Q5VXU3 224 aa13.08□□□□□ -0.32
CTSE-204ENST00000486757 DCAF1Q9Y4B6 1507 aa12.74□□□□□ -0.37
CTSE-204ENST00000486757 ZEB1P37275 1124 aaPredicted RBP12.59□□□□□ -0.39
CTSE-204ENST00000486757 CCDC180Q9P1Z9 1646 aa12.58□□□□□ -0.4
CTSE-204ENST00000486757 TTBK1Q5TCY1 1321 aaPredicted RBP12.54□□□□□ -0.4
CTSE-204ENST00000486757 MYO15BQ96JP2 1530 aa12.51□□□□□ -0.41
CTSE-204ENST00000486757 PCGF6Q9BYE7 350 aa12.47□□□□□ -0.41
CTSE-204ENST00000486757 PPARGC1BQ86YN6 1023 aaKnown RBP12.41□□□□□ -0.42
CTSE-204ENST00000486757 SCAF1Q9H7N4 1312 aaKnown RBP12.4□□□□□ -0.42
CTSE-204ENST00000486757 TRIM26Q12899 539 aaPredicted RBP12.38□□□□□ -0.43
CTSE-204ENST00000486757 ZCCHC6Q5VYS8 1495 aaKnown RBP12.27□□□□□ -0.44
CTSE-204ENST00000486757 ACIN1Q9UKV3 1341 aaKnown RBP12.2□□□□□ -0.46
CTSE-204ENST00000486757 SUPT5HO00267 1087 aaKnown RBP12.17□□□□□ -0.46
CTSE-204ENST00000486757 CENPBP07199 599 aaPredicted RBP12.09□□□□□ -0.47
CTSE-204ENST00000486757 SHROOM4Q9ULL8 1493 aa12.06□□□□□ -0.48
CTSE-204ENST00000486757 CLSPNQ9HAW4 1339 aa11.97□□□□□ -0.49
CTSE-204ENST00000486757 NEUROD1Q13562 356 aa11.97□□□□□ -0.49
CTSE-204ENST00000486757 GTF3C3Q9Y5Q9 886 aa11.92□□□□□ -0.5
CTSE-204ENST00000486757 LOC105371045A0A1W2PR82 267 aa11.82□□□□□ -0.52
CTSE-204ENST00000486757 DIEXFQ68CQ4 756 aaKnown RBP11.77□□□□□ -0.53
CTSE-204ENST00000486757 TRIM41Q8WV44 630 aa11.77□□□□□ -0.53
CTSE-204ENST00000486757 ABCC9O60706 1549 aa11.69□□□□□ -0.54
CTSE-204ENST00000486757 ANP32EQ9BTT0 268 aa11.67□□□□□ -0.54
CTSE-204ENST00000486757 BCL11AQ9H165 835 aa11.67□□□□□ -0.54
CTSE-204ENST00000486757 WRNQ14191 1432 aaPredicted RBP eCLIP11.67□□□□□ -0.54
CTSE-204ENST00000486757 ZNF316A6NFI3 1004 aaPredicted RBP11.61□□□□□ -0.55
CTSE-204ENST00000486757 CCER1Q8TC90 406 aaPredicted RBP11.57□□□□□ -0.56
CTSE-204ENST00000486757 RB1CC1Q8TDY2 1594 aa11.57□□□□□ -0.56
CTSE-204ENST00000486757 ERICH6Q7L0X2 663 aa11.52□□□□□ -0.57
CTSE-204ENST00000486757 PHF23Q9BUL5 403 aaPredicted RBP11.52□□□□□ -0.57
CTSE-204ENST00000486757 FAM9AQ8IZU1 332 aaPredicted RBP11.48□□□□□ -0.57
CTSE-204ENST00000486757 SENP3Q9H4L4 574 aaPredicted RBP11.48□□□□□ -0.57
CTSE-204ENST00000486757 RSF1Q96T23 1441 aaPredicted RBP11.48□□□□□ -0.57
CTSE-204ENST00000486757 MYT1LQ9UL68 1186 aa11.46□□□□□ -0.57
CTSE-204ENST00000486757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
CTSE-204ENST00000486757 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
CTSE-204ENST00000486757 SUPT16HQ9Y5B9 1047 aaKnown RBP11.42□□□□□ -0.58
CTSE-204ENST00000486757 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
CTSE-204ENST00000486757 MIER1Q8N108 512 aa11.36□□□□□ -0.59
CTSE-204ENST00000486757 APLP2Q06481 763 aa11.35□□□□□ -0.59
CTSE-204ENST00000486757 EEA1Q15075 1411 aa11.34□□□□□ -0.59
CTSE-204ENST00000486757 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
CTSE-204ENST00000486757 TNIKQ9UKE5 1360 aa11.32□□□□□ -0.6
CTSE-204ENST00000486757 EIF4G1Q04637 1599 aaKnown RBP11.32□□□□□ -0.6
CTSE-204ENST00000486757 CEP162Q5TB80 1403 aa11.25□□□□□ -0.61
CTSE-204ENST00000486757 FANCIQ9NVI1 1328 aa11.23□□□□□ -0.61
CTSE-204ENST00000486757 YTHDC1Q96MU7 727 aaKnown RBP11.22□□□□□ -0.61
CTSE-204ENST00000486757 ERICH6BQ5W0A0 696 aa11.19□□□□□ -0.62
CTSE-204ENST00000486757 BAZ1AQ9NRL2 1556 aaPredicted RBP11.14□□□□□ -0.63
CTSE-204ENST00000486757 RBM19Q9Y4C8 960 aaKnown RBP11.13□□□□□ -0.63
CTSE-204ENST00000486757 CUX2O14529 1486 aa11.12□□□□□ -0.63
CTSE-204ENST00000486757 GOLGA3Q08378 1498 aa11.1□□□□□ -0.63
CTSE-204ENST00000486757 KIF21BO75037 1637 aa11.06□□□□□ -0.64
CTSE-204ENST00000486757 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
CTSE-204ENST00000486757 VPS8Q8N3P4 1428 aa11.04□□□□□ -0.64
CTSE-204ENST00000486757 DHX57Q6P158 1386 aaKnown RBP11.03□□□□□ -0.64
CTSE-204ENST00000486757 CCER2I3L3R5 266 aa11.01□□□□□ -0.65
CTSE-204ENST00000486757 NEFLP07196 543 aa11.01□□□□□ -0.65
CTSE-204ENST00000486757 CEP164Q9UPV0 1460 aa11□□□□□ -0.65
CTSE-204ENST00000486757 DCAF8L2P0C7V8 631 aa11□□□□□ -0.65
CTSE-204ENST00000486757 MROH2BQ7Z745 1585 aa10.99□□□□□ -0.65
CTSE-204ENST00000486757 MSH5O43196 834 aa10.98□□□□□ -0.65
CTSE-204ENST00000486757 TOP2AP11388 1531 aaKnown RBP10.98□□□□□ -0.65
CTSE-204ENST00000486757 TIMELESSQ9UNS1 1208 aa10.97□□□□□ -0.65
CTSE-204ENST00000486757 NACADO15069 1562 aa10.97□□□□□ -0.65
CTSE-204ENST00000486757 SCRIBQ14160 1630 aa10.96□□□□□ -0.65
CTSE-204ENST00000486757 CCDC88BA6NC98 1476 aa10.95□□□□□ -0.66
CTSE-204ENST00000486757 CLIP1P30622 1438 aa10.94□□□□□ -0.66
CTSE-204ENST00000486757 RRBP1Q9P2E9 1410 aaKnown RBP10.94□□□□□ -0.66
CTSE-204ENST00000486757 FKBP8Q14318 412 aa10.93□□□□□ -0.66
CTSE-204ENST00000486757 UBE2Q2Q8WVN8 375 aa10.93□□□□□ -0.66
CTSE-204ENST00000486757 WIZO95785 1651 aa10.91□□□□□ -0.66
CTSE-204ENST00000486757 DEKP35659 375 aaKnown RBP10.9□□□□□ -0.66
CTSE-204ENST00000486757 CDK11AQ9UQ88 783 aaPredicted RBP10.89□□□□□ -0.67
CTSE-204ENST00000486757 ABCC8Q09428 1581 aa10.89□□□□□ -0.67
CTSE-204ENST00000486757 CECR2Q9BXF3 1484 aa10.88□□□□□ -0.67
CTSE-204ENST00000486757 SOGA1O94964 1423 aa10.88□□□□□ -0.67
CTSE-204ENST00000486757 SMARCA2P51531 1590 aa10.86□□□□□ -0.67
CTSE-204ENST00000486757 C11orf95C9JLR9 678 aaPredicted RBP10.83□□□□□ -0.68
CTSE-204ENST00000486757 PPP1R15AO75807 674 aaPredicted RBP10.83□□□□□ -0.68
CTSE-204ENST00000486757 HNRNPUL2Q1KMD3 747 aaKnown RBP10.82□□□□□ -0.68
CTSE-204ENST00000486757 ERICH3Q5RHP9 1530 aa10.82□□□□□ -0.68
CTSE-204ENST00000486757 MAP3K1Q13233 1512 aa10.81□□□□□ -0.68
CTSE-204ENST00000486757 USP35Q9P2H5 1018 aa10.79□□□□□ -0.68
CTSE-204ENST00000486757 MAPKBP1O60336 1514 aa10.79□□□□□ -0.68
CTSE-204ENST00000486757 PPP4R2Q9NY27 417 aa10.78□□□□□ -0.68
CTSE-204ENST00000486757 UBTFP17480 764 aaKnown RBP10.77□□□□□ -0.69
CTSE-204ENST00000486757 NOP58Q9Y2X3 529 aaKnown RBP10.77□□□□□ -0.69
CTSE-204ENST00000486757 SYNJ1O43426 1573 aa10.77□□□□□ -0.69
CTSE-204ENST00000486757 WASHC2AQ641Q2 1341 aa10.76□□□□□ -0.69
CTSE-204ENST00000486757 ANO8Q9HCE9 1232 aaPredicted RBP10.75□□□□□ -0.69
CTSE-204ENST00000486757 BCANQ96GW7 911 aa10.74□□□□□ -0.69
CTSE-204ENST00000486757 RUSC2Q8N2Y8 1516 aa10.74□□□□□ -0.69
CTSE-204ENST00000486757 FOXD1Q16676 465 aa10.73□□□□□ -0.69
CTSE-204ENST00000486757 EHMT2Q96KQ7 1210 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms