RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 TIAM1Q13009 1591 aa16.69■□□□□ 0.26
SLX4-203ENST00000486524 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
SLX4-203ENST00000486524 CUL7Q14999 1698 aa16.67■□□□□ 0.26
SLX4-203ENST00000486524 FHAD1B1AJZ9 1412 aa16.66■□□□□ 0.26
SLX4-203ENST00000486524 PCF11O94913 1555 aaKnown RBP16.66■□□□□ 0.26
SLX4-203ENST00000486524 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
SLX4-203ENST00000486524 WDR97A6NE52 1622 aa16.64■□□□□ 0.25
SLX4-203ENST00000486524 GAPVD1Q14C86 1478 aa16.64■□□□□ 0.25
SLX4-203ENST00000486524 LRRC9Q6ZRR7 1453 aa16.64■□□□□ 0.25
SLX4-203ENST00000486524 FAM50AQ14320 339 aaKnown RBP16.62■□□□□ 0.25
SLX4-203ENST00000486524 CTTNBP2Q8WZ74 1663 aa16.61■□□□□ 0.25
SLX4-203ENST00000486524 PHLDB1Q86UU1 1377 aa16.61■□□□□ 0.25
SLX4-203ENST00000486524 ABCA5Q8WWZ7 1642 aa16.6■□□□□ 0.25
SLX4-203ENST00000486524 MAP3K1Q13233 1512 aa16.6■□□□□ 0.25
SLX4-203ENST00000486524 EFCAB5A4FU69 1503 aa16.58■□□□□ 0.24
SLX4-203ENST00000486524 CFAP43Q8NDM7 1665 aa16.55■□□□□ 0.24
SLX4-203ENST00000486524 FYCO1Q9BQS8 1478 aa16.55■□□□□ 0.24
SLX4-203ENST00000486524 CASKIN1Q8WXD9 1431 aa16.54■□□□□ 0.24
SLX4-203ENST00000486524 RAB3GAP2Q9H2M9 1393 aa16.53■□□□□ 0.24
SLX4-203ENST00000486524 CLSPNQ9HAW4 1339 aa16.53■□□□□ 0.24
SLX4-203ENST00000486524 TARBP1Q13395 1621 aaKnown RBP16.53■□□□□ 0.24
SLX4-203ENST00000486524 AQRO60306 1485 aaKnown RBP eCLIP16.53■□□□□ 0.24
SLX4-203ENST00000486524 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.24
SLX4-203ENST00000486524 FMN1Q68DA7 1419 aa16.52■□□□□ 0.23
SLX4-203ENST00000486524 NEUROD1Q13562 356 aa16.48■□□□□ 0.23
SLX4-203ENST00000486524 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
SLX4-203ENST00000486524 SNAPC4Q5SXM2 1469 aa16.47■□□□□ 0.23
SLX4-203ENST00000486524 MTUS2Q5JR59 1369 aa16.47■□□□□ 0.23
SLX4-203ENST00000486524 MIER1Q8N108 512 aa16.46■□□□□ 0.23
SLX4-203ENST00000486524 SETD5Q9C0A6 1442 aa16.46■□□□□ 0.23
SLX4-203ENST00000486524 SAMD9Q5K651 1589 aa16.45■□□□□ 0.22
SLX4-203ENST00000486524 YTHDC1Q96MU7 727 aaKnown RBP16.45■□□□□ 0.22
SLX4-203ENST00000486524 ACIN1Q9UKV3 1341 aaKnown RBP16.45■□□□□ 0.22
SLX4-203ENST00000486524 MYT1Q01538 1121 aa16.44■□□□□ 0.22
SLX4-203ENST00000486524 PBRM1Q86U86 1689 aa16.44■□□□□ 0.22
SLX4-203ENST00000486524 ARID3CA6NKF2 412 aa16.42■□□□□ 0.22
SLX4-203ENST00000486524 CENPBP07199 599 aaPredicted RBP16.41■□□□□ 0.22
SLX4-203ENST00000486524 ZNF608Q9ULD9 1512 aaPredicted RBP16.41■□□□□ 0.22
SLX4-203ENST00000486524 LRRIQ1Q96JM4 1722 aa16.4■□□□□ 0.22
SLX4-203ENST00000486524 MAPKBP1O60336 1514 aa16.38■□□□□ 0.21
SLX4-203ENST00000486524 GRIN2BQ13224 1484 aa16.38■□□□□ 0.21
SLX4-203ENST00000486524 FGD6Q6ZV73 1430 aa16.38■□□□□ 0.21
SLX4-203ENST00000486524 ADAMTS12P58397 1594 aa16.37■□□□□ 0.21
SLX4-203ENST00000486524 SIN3AQ96ST3 1273 aa16.37■□□□□ 0.21
SLX4-203ENST00000486524 IQGAP2Q13576 1575 aa16.35■□□□□ 0.21
SLX4-203ENST00000486524 ERCC6Q03468 1493 aa16.35■□□□□ 0.21
SLX4-203ENST00000486524 NCOA2Q15596 1464 aa16.34■□□□□ 0.21
SLX4-203ENST00000486524 IFT140Q96RY7 1462 aa16.34■□□□□ 0.21
SLX4-203ENST00000486524 WDR62O43379 1518 aa16.32■□□□□ 0.2
SLX4-203ENST00000486524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.3■□□□□ 0.2
SLX4-203ENST00000486524 MYOM3Q5VTT5 1437 aa16.3■□□□□ 0.2
SLX4-203ENST00000486524 PTPRKQ15262 1439 aa16.29■□□□□ 0.2
SLX4-203ENST00000486524 MAGI3Q5TCQ9 1506 aa16.29■□□□□ 0.2
SLX4-203ENST00000486524 SUPT6HQ7KZ85 1726 aaKnown RBP16.29■□□□□ 0.2
SLX4-203ENST00000486524 GTF3C3Q9Y5Q9 886 aa16.29■□□□□ 0.2
SLX4-203ENST00000486524 THOC2Q8NI27 1593 aaKnown RBP16.29■□□□□ 0.2
SLX4-203ENST00000486524 EHBP1L1Q8N3D4 1523 aa16.28■□□□□ 0.2
SLX4-203ENST00000486524 FBLN2P98095 1184 aa16.27■□□□□ 0.2
SLX4-203ENST00000486524 CDK13Q14004 1512 aaKnown RBP16.27■□□□□ 0.2
SLX4-203ENST00000486524 CCDC18Q5T9S5 1454 aa16.26■□□□□ 0.19
SLX4-203ENST00000486524 HECW1Q76N89 1606 aa16.26■□□□□ 0.19
SLX4-203ENST00000486524 CHIC2Q9UKJ5 165 aa16.26■□□□□ 0.19
SLX4-203ENST00000486524 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
SLX4-203ENST00000486524 EPRSP07814 1512 aaKnown RBP16.25■□□□□ 0.19
SLX4-203ENST00000486524 UGGT2Q9NYU1 1516 aa16.23■□□□□ 0.19
SLX4-203ENST00000486524 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
SLX4-203ENST00000486524 RRP7BPQ9NSQ0 103 aa16.23■□□□□ 0.19
SLX4-203ENST00000486524 PTPN23Q9H3S7 1636 aa16.22■□□□□ 0.19
SLX4-203ENST00000486524 GRIN2AQ12879 1464 aa16.21■□□□□ 0.19
SLX4-203ENST00000486524 HFM1A2PYH4 1435 aa16.21■□□□□ 0.19
SLX4-203ENST00000486524 KIAA0586Q9BVV6 1533 aa16.21■□□□□ 0.18
SLX4-203ENST00000486524 NAIPQ13075 1403 aa16.19■□□□□ 0.18
SLX4-203ENST00000486524 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
SLX4-203ENST00000486524 ARHGEF11O15085 1522 aa16.18■□□□□ 0.18
SLX4-203ENST00000486524 KIAA0556O60303 1618 aa16.18■□□□□ 0.18
SLX4-203ENST00000486524 HIRIP3Q9BW71 556 aaPredicted RBP16.17■□□□□ 0.18
SLX4-203ENST00000486524 UACAQ9BZF9 1416 aa16.15■□□□□ 0.18
SLX4-203ENST00000486524 TRIM52Q96A61 297 aa16.14■□□□□ 0.17
SLX4-203ENST00000486524 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
SLX4-203ENST00000486524 PPP1R15AO75807 674 aaPredicted RBP16.13■□□□□ 0.17
SLX4-203ENST00000486524 NUP153P49790 1475 aaKnown RBP16.12■□□□□ 0.17
SLX4-203ENST00000486524 MAGI1Q96QZ7 1491 aaPredicted RBP16.12■□□□□ 0.17
SLX4-203ENST00000486524 CEP170Q5SW79 1584 aa16.11■□□□□ 0.17
SLX4-203ENST00000486524 SYNJ2O15056 1496 aa16.11■□□□□ 0.17
SLX4-203ENST00000486524 TIMELESSQ9UNS1 1208 aa16.11■□□□□ 0.17
SLX4-203ENST00000486524 TCOF1Q13428 1488 aaKnown RBP16.11■□□□□ 0.17
SLX4-203ENST00000486524 DDX10Q13206 875 aaKnown RBP16.1■□□□□ 0.17
SLX4-203ENST00000486524 ZNF644Q9H582 1327 aaPredicted RBP16.1■□□□□ 0.17
SLX4-203ENST00000486524 RAPGEF6Q8TEU7 1601 aa16.09■□□□□ 0.17
SLX4-203ENST00000486524 SLC24A1O60721 1099 aa16.08■□□□□ 0.17
SLX4-203ENST00000486524 CDK11AQ9UQ88 783 aaPredicted RBP16.08■□□□□ 0.17
SLX4-203ENST00000486524 JPH4Q96JJ6 628 aa16.08■□□□□ 0.16
SLX4-203ENST00000486524 MIA2Q96PC5 1412 aa16.07■□□□□ 0.16
SLX4-203ENST00000486524 PLB1Q6P1J6 1458 aa16.07■□□□□ 0.16
SLX4-203ENST00000486524 KDM6BO15054 1643 aa16.06■□□□□ 0.16
SLX4-203ENST00000486524 PRG4Q92954 1404 aaPredicted RBP16.06■□□□□ 0.16
SLX4-203ENST00000486524 FOXD1Q16676 465 aa16.04■□□□□ 0.16
SLX4-203ENST00000486524 KCNH8Q96L42 1107 aa16.04■□□□□ 0.16
SLX4-203ENST00000486524 ZNF777Q9ULD5 760 aaPredicted RBP16.04■□□□□ 0.16
SLX4-203ENST00000486524 GCC2Q8IWJ2 1684 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms