RNA–Protein interactions for RNA: ENST00000486425.1

MUC4-222, Transcript of mucin 4, cell surface associated, human

TSL 4

Gene MUC4, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC4-222	ENST00000486425	PRKAR2A	P13861	404 aa	Known RBP	12.85	□□□□□ -0.35
MUC4-222	ENST00000486425	FKBP8	Q14318	412 aa		12.82	□□□□□ -0.36
MUC4-222	ENST00000486425	NCAPD3	P42695	1498 aa		12.78	□□□□□ -0.36
MUC4-222	ENST00000486425	BAZ1B	Q9UIG0	1483 aa	Known RBP	12.78	□□□□□ -0.36
MUC4-222	ENST00000486425	PRDM2	Q13029	1718 aa		12.78	□□□□□ -0.36
MUC4-222	ENST00000486425	CHADL	Q6NUI6	762 aa		12.76	□□□□□ -0.37
MUC4-222	ENST00000486425	CCDC88B	A6NC98	1476 aa		12.74	□□□□□ -0.37
MUC4-222	ENST00000486425	HAX1	O00165	279 aa		12.69	□□□□□ -0.38
MUC4-222	ENST00000486425	CREBZF	Q9NS37	354 aa		12.69	□□□□□ -0.38
MUC4-222	ENST00000486425	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.65	□□□□□ -0.38
MUC4-222	ENST00000486425	C19orf67	A6NJJ6	358 aa		12.6	□□□□□ -0.39
MUC4-222	ENST00000486425	CUX2	O14529	1486 aa		12.59	□□□□□ -0.39
MUC4-222	ENST00000486425	EVX2	Q03828	476 aa		12.57	□□□□□ -0.4
MUC4-222	ENST00000486425	SP7	Q8TDD2	431 aa	Predicted RBP	12.56	□□□□□ -0.4
MUC4-222	ENST00000486425	MNX1	P50219	401 aa	Predicted RBP	12.53	□□□□□ -0.4
MUC4-222	ENST00000486425	BIVM-ERCC5	R4GMW8	1640 aa		12.51	□□□□□ -0.41
MUC4-222	ENST00000486425	CFTR	P13569	1480 aa		12.5	□□□□□ -0.41
MUC4-222	ENST00000486425	ERCC6	Q03468	1493 aa		12.5	□□□□□ -0.41
MUC4-222	ENST00000486425	ABCC8	Q09428	1581 aa		12.49	□□□□□ -0.41
MUC4-222	ENST00000486425	FBXO3	Q9UK99	471 aa		12.49	□□□□□ -0.41
MUC4-222	ENST00000486425	MIER1	Q8N108	512 aa		12.47	□□□□□ -0.41
MUC4-222	ENST00000486425	NPM1	P06748	294 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
MUC4-222	ENST00000486425	CD44	P16070	742 aa	Known RBP	12.46	□□□□□ -0.41
MUC4-222	ENST00000486425	NES	P48681	1621 aa		12.46	□□□□□ -0.41
MUC4-222	ENST00000486425	TOP2B	Q02880	1626 aa		12.45	□□□□□ -0.42
MUC4-222	ENST00000486425	LAMC3	Q9Y6N6	1575 aa		12.44	□□□□□ -0.42
MUC4-222	ENST00000486425	PLEKHG5	O94827	1062 aa		12.44	□□□□□ -0.42
MUC4-222	ENST00000486425	SYNJ1	O43426	1573 aa		12.43	□□□□□ -0.42
MUC4-222	ENST00000486425	PLCD3	Q8N3E9	789 aa		12.41	□□□□□ -0.42
MUC4-222	ENST00000486425	WRN	Q14191	1432 aa	Predicted RBP eCLIP	12.38	□□□□□ -0.43
MUC4-222	ENST00000486425	CADPS	Q9ULU8	1353 aa		12.37	□□□□□ -0.43
MUC4-222	ENST00000486425	TRIM41	Q8WV44	630 aa		12.36	□□□□□ -0.43
MUC4-222	ENST00000486425	ZRANB1	Q9UGI0	708 aa		12.34	□□□□□ -0.43
MUC4-222	ENST00000486425	PDS5B	Q9NTI5	1447 aa		12.34	□□□□□ -0.43
MUC4-222	ENST00000486425	THOC2	Q8NI27	1593 aa	Known RBP	12.34	□□□□□ -0.43
MUC4-222	ENST00000486425	KIF21A	Q7Z4S6	1674 aa		12.32	□□□□□ -0.44
MUC4-222	ENST00000486425	PAK3	O75914	559 aa	Predicted RBP	12.32	□□□□□ -0.44
MUC4-222	ENST00000486425	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.32	□□□□□ -0.44
MUC4-222	ENST00000486425	CUX1	P39880	1505 aa		12.32	□□□□□ -0.44
MUC4-222	ENST00000486425	GABBR2	O75899	941 aa		12.31	□□□□□ -0.44
MUC4-222	ENST00000486425	VASP	P50552	380 aa	Predicted RBP	12.31	□□□□□ -0.44
MUC4-222	ENST00000486425	ZNF579	Q8NAF0	562 aa	Known RBP	12.31	□□□□□ -0.44
MUC4-222	ENST00000486425	EEA1	Q15075	1411 aa		12.3	□□□□□ -0.44
MUC4-222	ENST00000486425	CLCN6	P51797	869 aa		12.29	□□□□□ -0.44
MUC4-222	ENST00000486425	DNMBP	Q6XZF7	1577 aa		12.27	□□□□□ -0.44
MUC4-222	ENST00000486425	FANCD2	Q9BXW9	1451 aa		12.26	□□□□□ -0.45
MUC4-222	ENST00000486425	WDR97	A6NE52	1622 aa		12.26	□□□□□ -0.45
MUC4-222	ENST00000486425	KIF21B	O75037	1637 aa		12.24	□□□□□ -0.45
MUC4-222	ENST00000486425	RASEF	Q8IZ41	740 aa		12.23	□□□□□ -0.45
MUC4-222	ENST00000486425	NUBP1	P53384	320 aa		12.22	□□□□□ -0.45
MUC4-222	ENST00000486425	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.22	□□□□□ -0.45
MUC4-222	ENST00000486425	CEP164	Q9UPV0	1460 aa		12.21	□□□□□ -0.45
MUC4-222	ENST00000486425	MRC2	Q9UBG0	1479 aa		12.21	□□□□□ -0.46
MUC4-222	ENST00000486425	PHF12	Q96QT6	1004 aa		12.19	□□□□□ -0.46
MUC4-222	ENST00000486425	CCDC61	Q9Y6R9	512 aa		12.19	□□□□□ -0.46
MUC4-222	ENST00000486425	WDR62	O43379	1518 aa		12.19	□□□□□ -0.46
MUC4-222	ENST00000486425	TOPBP1	Q92547	1522 aa		12.17	□□□□□ -0.46
MUC4-222	ENST00000486425	SOGA1	O94964	1423 aa		12.17	□□□□□ -0.46
MUC4-222	ENST00000486425	KLHL34	Q8N239	644 aa		12.15	□□□□□ -0.46
MUC4-222	ENST00000486425	FGD5	Q6ZNL6	1462 aa		12.14	□□□□□ -0.47
MUC4-222	ENST00000486425	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.14	□□□□□ -0.47
MUC4-222	ENST00000486425	URB2	Q14146	1524 aa	Known RBP	12.14	□□□□□ -0.47
MUC4-222	ENST00000486425	ERICH3	Q5RHP9	1530 aa		12.14	□□□□□ -0.47
MUC4-222	ENST00000486425	RUSC2	Q8N2Y8	1516 aa		12.13	□□□□□ -0.47
MUC4-222	ENST00000486425	GALR2	O43603	387 aa	Predicted RBP	12.12	□□□□□ -0.47
MUC4-222	ENST00000486425	ABCA10	Q8WWZ4	1543 aa		12.11	□□□□□ -0.47
MUC4-222	ENST00000486425	POLA1	P09884	1462 aa	Predicted RBP	12.1	□□□□□ -0.47
MUC4-222	ENST00000486425	FAM212A	Q96EL1	285 aa		12.1	□□□□□ -0.47
MUC4-222	ENST00000486425	TARBP1	Q13395	1621 aa	Known RBP	12.1	□□□□□ -0.47
MUC4-222	ENST00000486425	ABCA5	Q8WWZ7	1642 aa		12.1	□□□□□ -0.47
MUC4-222	ENST00000486425	CUL7	Q14999	1698 aa		12.09	□□□□□ -0.47
MUC4-222	ENST00000486425	GOLGA3	Q08378	1498 aa		12.08	□□□□□ -0.47
MUC4-222	ENST00000486425	KIF12	Q96FN5	646 aa		12.08	□□□□□ -0.48
MUC4-222	ENST00000486425	KIF27	Q86VH2	1401 aa		12.07	□□□□□ -0.48
MUC4-222	ENST00000486425	POTEI	P0CG38	1075 aa		12.06	□□□□□ -0.48
MUC4-222	ENST00000486425	PRX	Q9BXM0	1461 aa		12.06	□□□□□ -0.48
MUC4-222	ENST00000486425	PBRM1	Q86U86	1689 aa		12.06	□□□□□ -0.48
MUC4-222	ENST00000486425	MS4A3	Q96HJ5	214 aa		12.05	□□□□□ -0.48
MUC4-222	ENST00000486425	DCAF8	Q5TAQ9	597 aa		12.04	□□□□□ -0.48
MUC4-222	ENST00000486425	DCBLD2	Q96PD2	775 aa		12.04	□□□□□ -0.48
MUC4-222	ENST00000486425	SPOCK2	Q92563	424 aa		12.03	□□□□□ -0.48
MUC4-222	ENST00000486425	MAP3K13	O43283	966 aa		12.02	□□□□□ -0.49
MUC4-222	ENST00000486425	CTTNBP2	Q8WZ74	1663 aa		12.01	□□□□□ -0.49
MUC4-222	ENST00000486425	LOC105371045	A0A1W2PR82	267 aa		12.01	□□□□□ -0.49
MUC4-222	ENST00000486425	TNIK	Q9UKE5	1360 aa		12.01	□□□□□ -0.49
MUC4-222	ENST00000486425	GSE1	Q14687	1217 aa		11.99	□□□□□ -0.49
MUC4-222	ENST00000486425	SGIP1	Q9BQI5	828 aa		11.99	□□□□□ -0.49
MUC4-222	ENST00000486425	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.98	□□□□□ -0.49
MUC4-222	ENST00000486425	RAPGEF2	Q9Y4G8	1499 aa		11.97	□□□□□ -0.49
MUC4-222	ENST00000486425	RAD54L2	Q9Y4B4	1467 aa		11.96	□□□□□ -0.49
MUC4-222	ENST00000486425	PCDHB13	Q9Y5F0	798 aa		11.94	□□□□□ -0.5
MUC4-222	ENST00000486425	PYGB	P11216	843 aa		11.93	□□□□□ -0.5
MUC4-222	ENST00000486425	IFT140	Q96RY7	1462 aa		11.93	□□□□□ -0.5
MUC4-222	ENST00000486425	CEP162	Q5TB80	1403 aa		11.93	□□□□□ -0.5
MUC4-222	ENST00000486425	ASTL	Q6HA08	431 aa	Predicted RBP	11.92	□□□□□ -0.5
MUC4-222	ENST00000486425	EIF4G3	O43432	1585 aa	Known RBP	11.92	□□□□□ -0.5
MUC4-222	ENST00000486425	ADAMTS12	P58397	1594 aa		11.91	□□□□□ -0.5
MUC4-222	ENST00000486425	IGF1R	P08069	1367 aa		11.91	□□□□□ -0.5
MUC4-222	ENST00000486425	IFNL1	Q8IU54	200 aa		11.9	□□□□□ -0.5
MUC4-222	ENST00000486425	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms