RNA–Protein interactions for RNA: ENST00000486402.1

CASK-213, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

TSL 3

Gene CASK, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-213ENST00000486402 CLSPNQ9HAW4 1339 aa16.21■□□□□ 0.19
CASK-213ENST00000486402 MAP3K1Q13233 1512 aa16.18■□□□□ 0.18
CASK-213ENST00000486402 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
CASK-213ENST00000486402 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
CASK-213ENST00000486402 CC2D2AQ9P2K1 1620 aa16.09■□□□□ 0.17
CASK-213ENST00000486402 CHRDL2Q6WN34 429 aa16.08■□□□□ 0.16
CASK-213ENST00000486402 RRBP1Q9P2E9 1410 aaKnown RBP16.08■□□□□ 0.16
CASK-213ENST00000486402 CUX2O14529 1486 aa16.08■□□□□ 0.16
CASK-213ENST00000486402 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
CASK-213ENST00000486402 DNMBPQ6XZF7 1577 aa16.07■□□□□ 0.16
CASK-213ENST00000486402 IGF1RP08069 1367 aa16.06■□□□□ 0.16
CASK-213ENST00000486402 FGD5Q6ZNL6 1462 aa16.05■□□□□ 0.16
CASK-213ENST00000486402 ARHGAP35Q9NRY4 1499 aa16.04■□□□□ 0.16
CASK-213ENST00000486402 DIEXFQ68CQ4 756 aaKnown RBP16.04■□□□□ 0.16
CASK-213ENST00000486402 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
CASK-213ENST00000486402 FHAD1B1AJZ9 1412 aa16.03■□□□□ 0.16
CASK-213ENST00000486402 ZNF316A6NFI3 1004 aaPredicted RBP16.03■□□□□ 0.16
CASK-213ENST00000486402 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
CASK-213ENST00000486402 CUL7Q14999 1698 aa16.02■□□□□ 0.15
CASK-213ENST00000486402 CARMIL1Q5VZK9 1371 aa16.01■□□□□ 0.15
CASK-213ENST00000486402 LAMC3Q9Y6N6 1575 aa16.01■□□□□ 0.15
CASK-213ENST00000486402 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
CASK-213ENST00000486402 TTBK1Q5TCY1 1321 aaPredicted RBP16■□□□□ 0.15
CASK-213ENST00000486402 EFCAB5A4FU69 1503 aa16■□□□□ 0.15
CASK-213ENST00000486402 CENPBP07199 599 aaPredicted RBP15.99■□□□□ 0.15
CASK-213ENST00000486402 TIAM1Q13009 1591 aa15.96■□□□□ 0.14
CASK-213ENST00000486402 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
CASK-213ENST00000486402 CCNB3Q8WWL7 1395 aa15.95■□□□□ 0.14
CASK-213ENST00000486402 AQRO60306 1485 aaKnown RBP eCLIP15.95■□□□□ 0.14
CASK-213ENST00000486402 SP7Q8TDD2 431 aaPredicted RBP15.94■□□□□ 0.14
CASK-213ENST00000486402 PELP1Q8IZL8 1130 aaKnown RBP15.93■□□□□ 0.14
CASK-213ENST00000486402 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
CASK-213ENST00000486402 CFAP43Q8NDM7 1665 aa15.92■□□□□ 0.14
CASK-213ENST00000486402 POLA1P09884 1462 aaPredicted RBP15.89■□□□□ 0.13
CASK-213ENST00000486402 FYCO1Q9BQS8 1478 aa15.89■□□□□ 0.13
CASK-213ENST00000486402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.88■□□□□ 0.13
CASK-213ENST00000486402 DHX57Q6P158 1386 aaKnown RBP15.87■□□□□ 0.13
CASK-213ENST00000486402 LRRC9Q6ZRR7 1453 aa15.87■□□□□ 0.13
CASK-213ENST00000486402 ACIN1Q9UKV3 1341 aaKnown RBP15.87■□□□□ 0.13
CASK-213ENST00000486402 WDR97A6NE52 1622 aa15.86■□□□□ 0.13
CASK-213ENST00000486402 CTTNBP2Q8WZ74 1663 aa15.86■□□□□ 0.13
CASK-213ENST00000486402 PDS5BQ9NTI5 1447 aa15.85■□□□□ 0.13
CASK-213ENST00000486402 KANK4Q5T7N3 995 aaPredicted RBP15.85■□□□□ 0.13
CASK-213ENST00000486402 RANGAP1P46060 587 aaPredicted RBP15.83■□□□□ 0.12
CASK-213ENST00000486402 FMN1Q68DA7 1419 aa15.83■□□□□ 0.12
CASK-213ENST00000486402 CASKIN1Q8WXD9 1431 aa15.83■□□□□ 0.12
CASK-213ENST00000486402 THOC2Q8NI27 1593 aaKnown RBP15.82■□□□□ 0.12
CASK-213ENST00000486402 ABCA5Q8WWZ7 1642 aa15.8■□□□□ 0.12
CASK-213ENST00000486402 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
CASK-213ENST00000486402 PCF11O94913 1555 aaKnown RBP15.78■□□□□ 0.12
CASK-213ENST00000486402 TIMELESSQ9UNS1 1208 aa15.77■□□□□ 0.12
CASK-213ENST00000486402 SAMD9Q5K651 1589 aa15.75■□□□□ 0.11
CASK-213ENST00000486402 URB2Q14146 1524 aaKnown RBP15.74■□□□□ 0.11
CASK-213ENST00000486402 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
CASK-213ENST00000486402 SAMD1Q6SPF0 538 aaPredicted RBP15.74■□□□□ 0.11
CASK-213ENST00000486402 SETD5Q9C0A6 1442 aa15.74■□□□□ 0.11
CASK-213ENST00000486402 GAPVD1Q14C86 1478 aa15.71■□□□□ 0.11
CASK-213ENST00000486402 NESP48681 1621 aa15.69■□□□□ 0.1
CASK-213ENST00000486402 RAB3GAP2Q9H2M9 1393 aa15.68■□□□□ 0.1
CASK-213ENST00000486402 SNAPC4Q5SXM2 1469 aa15.66■□□□□ 0.1
CASK-213ENST00000486402 PHLDB1Q86UU1 1377 aa15.66■□□□□ 0.1
CASK-213ENST00000486402 NEUROD1Q13562 356 aa15.66■□□□□ 0.1
CASK-213ENST00000486402 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
CASK-213ENST00000486402 FHOD3Q2V2M9 1422 aa15.65■□□□□ 0.1
CASK-213ENST00000486402 TARBP1Q13395 1621 aaKnown RBP15.64■□□□□ 0.09
CASK-213ENST00000486402 EHBP1L1Q8N3D4 1523 aa15.63■□□□□ 0.09
CASK-213ENST00000486402 POLA2Q14181 598 aa15.63■□□□□ 0.09
CASK-213ENST00000486402 MAPKBP1O60336 1514 aa15.62■□□□□ 0.09
CASK-213ENST00000486402 FGD6Q6ZV73 1430 aa15.6■□□□□ 0.09
CASK-213ENST00000486402 GRIN2BQ13224 1484 aa15.6■□□□□ 0.09
CASK-213ENST00000486402 SUPT6HQ7KZ85 1726 aaKnown RBP15.6■□□□□ 0.09
CASK-213ENST00000486402 MTUS2Q5JR59 1369 aa15.58■□□□□ 0.08
CASK-213ENST00000486402 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
CASK-213ENST00000486402 MIER1Q8N108 512 aa15.57■□□□□ 0.08
CASK-213ENST00000486402 MRC2Q9UBG0 1479 aa15.57■□□□□ 0.08
CASK-213ENST00000486402 HECW1Q76N89 1606 aa15.57■□□□□ 0.08
CASK-213ENST00000486402 HFM1A2PYH4 1435 aa15.56■□□□□ 0.08
CASK-213ENST00000486402 MYOM3Q5VTT5 1437 aa15.55■□□□□ 0.08
CASK-213ENST00000486402 ADAMTS12P58397 1594 aa15.54■□□□□ 0.08
CASK-213ENST00000486402 AKNAQ7Z591 1439 aa15.54■□□□□ 0.08
CASK-213ENST00000486402 TDRD9Q8NDG6 1382 aaKnown RBP15.54■□□□□ 0.08
CASK-213ENST00000486402 FAM50AQ14320 339 aaKnown RBP15.54■□□□□ 0.08
CASK-213ENST00000486402 PIP4P2Q8N4L2 257 aa15.54■□□□□ 0.08
CASK-213ENST00000486402 GTF3C3Q9Y5Q9 886 aa15.54■□□□□ 0.08
CASK-213ENST00000486402 IQGAP2Q13576 1575 aa15.53■□□□□ 0.08
CASK-213ENST00000486402 ARHGEF11O15085 1522 aa15.53■□□□□ 0.08
CASK-213ENST00000486402 KCNA4P22459 653 aa15.53■□□□□ 0.08
CASK-213ENST00000486402 IFT140Q96RY7 1462 aa15.52■□□□□ 0.08
CASK-213ENST00000486402 UGGT2Q9NYU1 1516 aa15.51■□□□□ 0.07
CASK-213ENST00000486402 NCOA2Q15596 1464 aa15.51■□□□□ 0.07
CASK-213ENST00000486402 UACAQ9BZF9 1416 aa15.51■□□□□ 0.07
CASK-213ENST00000486402 AKT1S1Q96B36 256 aa15.5■□□□□ 0.07
CASK-213ENST00000486402 TCOF1Q13428 1488 aaKnown RBP15.5■□□□□ 0.07
CASK-213ENST00000486402 ITGAEP38570 1179 aa15.49■□□□□ 0.07
CASK-213ENST00000486402 MIA2Q96PC5 1412 aa15.49■□□□□ 0.07
CASK-213ENST00000486402 P3H3Q8IVL6 736 aa15.48■□□□□ 0.07
CASK-213ENST00000486402 WDR62O43379 1518 aa15.48■□□□□ 0.07
CASK-213ENST00000486402 PTPN23Q9H3S7 1636 aa15.47■□□□□ 0.07
CASK-213ENST00000486402 ATP1B4Q9UN42 357 aaPredicted RBP15.47■□□□□ 0.07
CASK-213ENST00000486402 HAX1O00165 279 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms