RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 EHMT2Q96KQ7 1210 aa25.54■■□□□ 1.68
RPUSD3-217ENST00000485705 SHROOM2Q13796 1616 aa25.52■■□□□ 1.68
RPUSD3-217ENST00000485705 JPH4Q96JJ6 628 aa25.51■■□□□ 1.67
RPUSD3-217ENST00000485705 ARHGEF11O15085 1522 aa25.51■■□□□ 1.67
RPUSD3-217ENST00000485705 CTTNBP2Q8WZ74 1663 aa25.51■■□□□ 1.67
RPUSD3-217ENST00000485705 RIMBP3CA6NJZ7 1639 aa25.5■■□□□ 1.67
RPUSD3-217ENST00000485705 RIMBP3BA6NNM3 1639 aa25.5■■□□□ 1.67
RPUSD3-217ENST00000485705 RIMBP3Q9UFD9 1639 aa25.5■■□□□ 1.67
RPUSD3-217ENST00000485705 IQGAP2Q13576 1575 aa25.48■■□□□ 1.67
RPUSD3-217ENST00000485705 ERCC6L2Q5T890 1561 aa25.47■■□□□ 1.67
RPUSD3-217ENST00000485705 GOLGA3Q08378 1498 aa25.45■■□□□ 1.66
RPUSD3-217ENST00000485705 PRG4Q92954 1404 aaPredicted RBP25.43■■□□□ 1.66
RPUSD3-217ENST00000485705 UBTFP17480 764 aaKnown RBP25.38■■□□□ 1.65
RPUSD3-217ENST00000485705 UGGT2Q9NYU1 1516 aa25.36■■□□□ 1.65
RPUSD3-217ENST00000485705 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
RPUSD3-217ENST00000485705 DISP1Q96F81 1524 aa25.3■■□□□ 1.64
RPUSD3-217ENST00000485705 CYB5RLQ6IPT4 315 aa25.29■■□□□ 1.64
RPUSD3-217ENST00000485705 RANGAP1P46060 587 aaPredicted RBP25.28■■□□□ 1.64
RPUSD3-217ENST00000485705 LOC105371045A0A1W2PR82 267 aa25.26■■□□□ 1.63
RPUSD3-217ENST00000485705 CARMIL2Q6F5E8 1435 aa25.26■■□□□ 1.63
RPUSD3-217ENST00000485705 KIAA0556O60303 1618 aa25.25■■□□□ 1.63
RPUSD3-217ENST00000485705 TTBK1Q5TCY1 1321 aaPredicted RBP25.2■■□□□ 1.62
RPUSD3-217ENST00000485705 P3H3Q8IVL6 736 aa25.19■■□□□ 1.62
RPUSD3-217ENST00000485705 TNIKQ9UKE5 1360 aa25.18■■□□□ 1.62
RPUSD3-217ENST00000485705 SAMD9Q5K651 1589 aa25.18■■□□□ 1.62
RPUSD3-217ENST00000485705 PTPRGP23470 1445 aa25.15■■□□□ 1.62
RPUSD3-217ENST00000485705 EFCAB5A4FU69 1503 aa25.09■■□□□ 1.61
RPUSD3-217ENST00000485705 FHOD3Q2V2M9 1422 aa25.08■■□□□ 1.61
RPUSD3-217ENST00000485705 ARHGAP35Q9NRY4 1499 aa25.08■■□□□ 1.6
RPUSD3-217ENST00000485705 ADCY10Q96PN6 1610 aa25.01■■□□□ 1.59
RPUSD3-217ENST00000485705 CLIP1P30622 1438 aa25.01■■□□□ 1.59
RPUSD3-217ENST00000485705 PLB1Q6P1J6 1458 aa25■■□□□ 1.59
RPUSD3-217ENST00000485705 UACAQ9BZF9 1416 aa24.99■■□□□ 1.59
RPUSD3-217ENST00000485705 CEP162Q5TB80 1403 aa24.98■■□□□ 1.59
RPUSD3-217ENST00000485705 ABCA8O94911 1581 aa24.97■■□□□ 1.59
RPUSD3-217ENST00000485705 ABCC2Q92887 1545 aa24.93■■□□□ 1.58
RPUSD3-217ENST00000485705 UHRF1BP1LA0JNW5 1464 aa24.93■■□□□ 1.58
RPUSD3-217ENST00000485705 RAPGEF6Q8TEU7 1601 aa24.89■■□□□ 1.57
RPUSD3-217ENST00000485705 FMN1Q68DA7 1419 aa24.86■■□□□ 1.57
RPUSD3-217ENST00000485705 ARID3CA6NKF2 412 aa24.84■■□□□ 1.57
RPUSD3-217ENST00000485705 NPM1P06748 294 aaKnown RBP eCLIP24.84■■□□□ 1.57
RPUSD3-217ENST00000485705 KDM5BQ9UGL1 1544 aa24.82■■□□□ 1.56
RPUSD3-217ENST00000485705 ZCCHC11Q5TAX3 1644 aaKnown RBP24.81■■□□□ 1.56
RPUSD3-217ENST00000485705 NUP153P49790 1475 aaKnown RBP24.81■■□□□ 1.56
RPUSD3-217ENST00000485705 ATP10BO94823 1461 aa24.77■■□□□ 1.56
RPUSD3-217ENST00000485705 ATP1B4Q9UN42 357 aaPredicted RBP24.77■■□□□ 1.56
RPUSD3-217ENST00000485705 PCF11O94913 1555 aaKnown RBP24.76■■□□□ 1.55
RPUSD3-217ENST00000485705 MAPKBP1O60336 1514 aa24.74■■□□□ 1.55
RPUSD3-217ENST00000485705 CASKIN1Q8WXD9 1431 aa24.73■■□□□ 1.55
RPUSD3-217ENST00000485705 HECW1Q76N89 1606 aa24.72■■□□□ 1.55
RPUSD3-217ENST00000485705 LRRIQ1Q96JM4 1722 aa24.72■■□□□ 1.55
RPUSD3-217ENST00000485705 ASXL2Q76L83 1435 aa24.7■■□□□ 1.55
RPUSD3-217ENST00000485705 CDK13Q14004 1512 aaKnown RBP24.69■■□□□ 1.54
RPUSD3-217ENST00000485705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.68■■□□□ 1.54
RPUSD3-217ENST00000485705 HNRNPUL2Q1KMD3 747 aaKnown RBP24.68■■□□□ 1.54
RPUSD3-217ENST00000485705 EPRSP07814 1512 aaKnown RBP24.67■■□□□ 1.54
RPUSD3-217ENST00000485705 FYCO1Q9BQS8 1478 aa24.67■■□□□ 1.54
RPUSD3-217ENST00000485705 VPS8Q8N3P4 1428 aa24.64■■□□□ 1.54
RPUSD3-217ENST00000485705 TRHP20396 242 aaPredicted RBP24.64■■□□□ 1.54
RPUSD3-217ENST00000485705 KIF13AQ9H1H9 1805 aa24.62■■□□□ 1.53
RPUSD3-217ENST00000485705 WDR7Q9Y4E6 1490 aa24.62■■□□□ 1.53
RPUSD3-217ENST00000485705 ABCC10Q5T3U5 1492 aa24.61■■□□□ 1.53
RPUSD3-217ENST00000485705 DIP2BQ9P265 1576 aa24.59■■□□□ 1.53
RPUSD3-217ENST00000485705 FAM69CQ0P6D2 419 aa24.57■■□□□ 1.52
RPUSD3-217ENST00000485705 KCNH8Q96L42 1107 aa24.57■■□□□ 1.52
RPUSD3-217ENST00000485705 CCDC18Q5T9S5 1454 aa24.57■■□□□ 1.52
RPUSD3-217ENST00000485705 PLEKHD1A6NEE1 506 aa24.55■■□□□ 1.52
RPUSD3-217ENST00000485705 GLI2P10070 1586 aa24.5■■□□□ 1.51
RPUSD3-217ENST00000485705 MAGI3Q5TCQ9 1506 aa24.49■■□□□ 1.51
RPUSD3-217ENST00000485705 CDK11AQ9UQ88 783 aaPredicted RBP24.48■■□□□ 1.51
RPUSD3-217ENST00000485705 TSPOAP1O95153 1857 aa24.47■■□□□ 1.51
RPUSD3-217ENST00000485705 TROQ12816 1431 aaPredicted RBP24.45■■□□□ 1.51
RPUSD3-217ENST00000485705 CFAP43Q8NDM7 1665 aa24.45■■□□□ 1.5
RPUSD3-217ENST00000485705 MAP3K4Q9Y6R4 1608 aa24.43■■□□□ 1.5
RPUSD3-217ENST00000485705 TIAM1Q13009 1591 aa24.42■■□□□ 1.5
RPUSD3-217ENST00000485705 KIF14Q15058 1648 aa24.42■■□□□ 1.5
RPUSD3-217ENST00000485705 ABCA9Q8IUA7 1624 aa24.4■■□□□ 1.5
RPUSD3-217ENST00000485705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.39■■□□□ 1.49
RPUSD3-217ENST00000485705 PPRC1Q5VV67 1664 aaKnown RBP24.37■■□□□ 1.49
RPUSD3-217ENST00000485705 MTUS2Q5JR59 1369 aa24.37■■□□□ 1.49
RPUSD3-217ENST00000485705 TTC37Q6PGP7 1564 aa24.37■■□□□ 1.49
RPUSD3-217ENST00000485705 CD109Q6YHK3 1445 aa24.36■■□□□ 1.49
RPUSD3-217ENST00000485705 MAP3K1Q13233 1512 aa24.36■■□□□ 1.49
RPUSD3-217ENST00000485705 KANK4Q5T7N3 995 aaPredicted RBP24.35■■□□□ 1.49
RPUSD3-217ENST00000485705 APLP2Q06481 763 aa24.33■■□□□ 1.49
RPUSD3-217ENST00000485705 EHBP1L1Q8N3D4 1523 aa24.33■■□□□ 1.49
RPUSD3-217ENST00000485705 LRRC9Q6ZRR7 1453 aa24.32■■□□□ 1.48
RPUSD3-217ENST00000485705 MYO5CQ9NQX4 1742 aa24.26■■□□□ 1.47
RPUSD3-217ENST00000485705 SUPT6HQ7KZ85 1726 aaKnown RBP24.24■■□□□ 1.47
RPUSD3-217ENST00000485705 PLCH2O75038 1416 aa24.23■■□□□ 1.47
RPUSD3-217ENST00000485705 TEX14Q8IWB6 1497 aa24.23■■□□□ 1.47
RPUSD3-217ENST00000485705 CDC42BPAQ5VT25 1732 aa24.23■■□□□ 1.47
RPUSD3-217ENST00000485705 NCOA2Q15596 1464 aa24.21■■□□□ 1.47
RPUSD3-217ENST00000485705 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
RPUSD3-217ENST00000485705 CDC42BPBQ9Y5S2 1711 aa24.21■■□□□ 1.47
RPUSD3-217ENST00000485705 PREX2Q70Z35 1606 aa24.18■■□□□ 1.46
RPUSD3-217ENST00000485705 GPATCH8Q9UKJ3 1502 aaKnown RBP24.18■■□□□ 1.46
RPUSD3-217ENST00000485705 PPARGC1BQ86YN6 1023 aaKnown RBP24.17■■□□□ 1.46
RPUSD3-217ENST00000485705 FANCAO15360 1455 aa24.17■■□□□ 1.46
RPUSD3-217ENST00000485705 CCNB3Q8WWL7 1395 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms