RNA–Protein interactions for RNA: ENST00000485541.1

SRRM1-214, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-214ENST00000485541 CNKSR2Q8WXI2 1034 aa12.35□□□□□ -0.43
SRRM1-214ENST00000485541 EHMT2Q96KQ7 1210 aa12.35□□□□□ -0.43
SRRM1-214ENST00000485541 WDR62O43379 1518 aa12.35□□□□□ -0.43
SRRM1-214ENST00000485541 PBRM1Q86U86 1689 aa12.34□□□□□ -0.43
SRRM1-214ENST00000485541 CARMIL1Q5VZK9 1371 aa12.33□□□□□ -0.44
SRRM1-214ENST00000485541 RAD54L2Q9Y4B4 1467 aa12.32□□□□□ -0.44
SRRM1-214ENST00000485541 EFCAB5A4FU69 1503 aa12.3□□□□□ -0.44
SRRM1-214ENST00000485541 GAPVD1Q14C86 1478 aa12.29□□□□□ -0.44
SRRM1-214ENST00000485541 ARAP1Q96P48 1450 aa12.27□□□□□ -0.44
SRRM1-214ENST00000485541 THOC2Q8NI27 1593 aaKnown RBP12.27□□□□□ -0.44
SRRM1-214ENST00000485541 HRCP23327 699 aa12.27□□□□□ -0.45
SRRM1-214ENST00000485541 IFT140Q96RY7 1462 aa12.27□□□□□ -0.45
SRRM1-214ENST00000485541 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
SRRM1-214ENST00000485541 MAP3K1Q13233 1512 aa12.26□□□□□ -0.45
SRRM1-214ENST00000485541 DNAJC5BQ9UF47 199 aa12.25□□□□□ -0.45
SRRM1-214ENST00000485541 ARHGAP35Q9NRY4 1499 aa12.25□□□□□ -0.45
SRRM1-214ENST00000485541 ADAMTS12P58397 1594 aa12.22□□□□□ -0.45
SRRM1-214ENST00000485541 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.45
SRRM1-214ENST00000485541 CFAP43Q8NDM7 1665 aa12.2□□□□□ -0.46
SRRM1-214ENST00000485541 NCBP3Q53F19 620 aaKnown RBP12.2□□□□□ -0.46
SRRM1-214ENST00000485541 ERCC6Q03468 1493 aa12.2□□□□□ -0.46
SRRM1-214ENST00000485541 GRIN2BQ13224 1484 aa12.2□□□□□ -0.46
SRRM1-214ENST00000485541 SAMD9Q5K651 1589 aa12.19□□□□□ -0.46
SRRM1-214ENST00000485541 APLP2Q06481 763 aa12.19□□□□□ -0.46
SRRM1-214ENST00000485541 AQRO60306 1485 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■□□□□ 11.2
SRRM1-214ENST00000485541 ZEB1P37275 1124 aaPredicted RBP12.18□□□□□ -0.46
SRRM1-214ENST00000485541 EIF4G3O43432 1585 aaKnown RBP12.16□□□□□ -0.46
SRRM1-214ENST00000485541 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
SRRM1-214ENST00000485541 TIAM1Q13009 1591 aa12.15□□□□□ -0.46
SRRM1-214ENST00000485541 FYCO1Q9BQS8 1478 aa12.14□□□□□ -0.47
SRRM1-214ENST00000485541 KCNA4P22459 653 aa12.14□□□□□ -0.47
SRRM1-214ENST00000485541 MAGI1Q96QZ7 1491 aaPredicted RBP12.13□□□□□ -0.47
SRRM1-214ENST00000485541 FMN1Q68DA7 1419 aa12.12□□□□□ -0.47
SRRM1-214ENST00000485541 IQGAP2Q13576 1575 aa12.12□□□□□ -0.47
SRRM1-214ENST00000485541 PCF11O94913 1555 aaKnown RBP12.11□□□□□ -0.47
SRRM1-214ENST00000485541 CASKIN1Q8WXD9 1431 aa12.09□□□□□ -0.47
SRRM1-214ENST00000485541 UGGT2Q9NYU1 1516 aa12.07□□□□□ -0.48
SRRM1-214ENST00000485541 RRBP1Q9P2E9 1410 aaKnown RBP12.06□□□□□ -0.48
SRRM1-214ENST00000485541 POTEHQ6S545 545 aa12.06□□□□□ -0.48
SRRM1-214ENST00000485541 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
SRRM1-214ENST00000485541 GRIN2AQ12879 1464 aa12.04□□□□□ -0.48
SRRM1-214ENST00000485541 SNAPC4Q5SXM2 1469 aa12.04□□□□□ -0.48
SRRM1-214ENST00000485541 KIAA0586Q9BVV6 1533 aa12.04□□□□□ -0.48
SRRM1-214ENST00000485541 SYNJ2O15056 1496 aa12.03□□□□□ -0.48
SRRM1-214ENST00000485541 LRRC9Q6ZRR7 1453 aa12.03□□□□□ -0.48
SRRM1-214ENST00000485541 PPARGC1BQ86YN6 1023 aaKnown RBP12.03□□□□□ -0.48
SRRM1-214ENST00000485541 HECW1Q76N89 1606 aa12.03□□□□□ -0.48
SRRM1-214ENST00000485541 LRRIQ1Q96JM4 1722 aa12.02□□□□□ -0.49
SRRM1-214ENST00000485541 FHOD3Q2V2M9 1422 aa12.02□□□□□ -0.49
SRRM1-214ENST00000485541 CCDC18Q5T9S5 1454 aa12.02□□□□□ -0.49
SRRM1-214ENST00000485541 RANGAP1P46060 587 aaPredicted RBP12.01□□□□□ -0.49
SRRM1-214ENST00000485541 KIAA0556O60303 1618 aa12□□□□□ -0.49
SRRM1-214ENST00000485541 SUPT6HQ7KZ85 1726 aaKnown RBP11.97□□□□□ -0.49
SRRM1-214ENST00000485541 EHBP1L1Q8N3D4 1523 aa11.97□□□□□ -0.49
SRRM1-214ENST00000485541 NUP160Q12769 1436 aa11.96□□□□□ -0.49
SRRM1-214ENST00000485541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.96□□□□□ -0.49
SRRM1-214ENST00000485541 CEP170Q5SW79 1584 aa11.95□□□□□ -0.5
SRRM1-214ENST00000485541 CCNB3Q8WWL7 1395 aa11.94□□□□□ -0.5
SRRM1-214ENST00000485541 KANK4Q5T7N3 995 aaPredicted RBP11.94□□□□□ -0.5
SRRM1-214ENST00000485541 DISP1Q96F81 1524 aa11.91□□□□□ -0.5
SRRM1-214ENST00000485541 RAPGEF6Q8TEU7 1601 aa11.91□□□□□ -0.5
SRRM1-214ENST00000485541 CHD1O14646 1710 aa11.91□□□□□ -0.5
SRRM1-214ENST00000485541 TTBK1Q5TCY1 1321 aaPredicted RBP11.9□□□□□ -0.5
SRRM1-214ENST00000485541 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
SRRM1-214ENST00000485541 ARHGEF11O15085 1522 aa11.9□□□□□ -0.5
SRRM1-214ENST00000485541 NPM3O75607 178 aaKnown RBP11.89□□□□□ -0.51
SRRM1-214ENST00000485541 CCER1Q8TC90 406 aaPredicted RBP11.88□□□□□ -0.51
SRRM1-214ENST00000485541 CARMIL2Q6F5E8 1435 aa11.87□□□□□ -0.51
SRRM1-214ENST00000485541 EPRSP07814 1512 aaKnown RBP11.87□□□□□ -0.51
SRRM1-214ENST00000485541 P3H3Q8IVL6 736 aa11.86□□□□□ -0.51
SRRM1-214ENST00000485541 CHMP7Q8WUX9 453 aaPredicted RBP11.86□□□□□ -0.51
SRRM1-214ENST00000485541 MTUS2Q5JR59 1369 aa11.86□□□□□ -0.51
SRRM1-214ENST00000485541 SHROOM2Q13796 1616 aa11.86□□□□□ -0.51
SRRM1-214ENST00000485541 PHLDB1Q86UU1 1377 aa11.85□□□□□ -0.51
SRRM1-214ENST00000485541 ADCY10Q96PN6 1610 aa11.85□□□□□ -0.51
SRRM1-214ENST00000485541 FGD6Q6ZV73 1430 aa11.84□□□□□ -0.51
SRRM1-214ENST00000485541 NCOA2Q15596 1464 aa11.83□□□□□ -0.52
SRRM1-214ENST00000485541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-214ENST00000485541 ITSN2Q9NZM3 1697 aa11.83□□□□□ -0.52
SRRM1-214ENST00000485541 MYOM3Q5VTT5 1437 aa11.83□□□□□ -0.52
SRRM1-214ENST00000485541 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
SRRM1-214ENST00000485541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.521e-7■■□□□ 14.5
SRRM1-214ENST00000485541 PTPN23Q9H3S7 1636 aa11.81□□□□□ -0.52
SRRM1-214ENST00000485541 TCOF1Q13428 1488 aaKnown RBP11.81□□□□□ -0.52
SRRM1-214ENST00000485541 ABCA8O94911 1581 aa11.8□□□□□ -0.52
SRRM1-214ENST00000485541 MIA2Q96PC5 1412 aa11.8□□□□□ -0.52
SRRM1-214ENST00000485541 NUP153P49790 1475 aaKnown RBP11.8□□□□□ -0.52
SRRM1-214ENST00000485541 MAGI3Q5TCQ9 1506 aa11.8□□□□□ -0.52
SRRM1-214ENST00000485541 GCC2Q8IWJ2 1684 aa11.78□□□□□ -0.52
SRRM1-214ENST00000485541 CDK13Q14004 1512 aaKnown RBP11.77□□□□□ -0.52
SRRM1-214ENST00000485541 ATP1B4Q9UN42 357 aaPredicted RBP11.77□□□□□ -0.53
SRRM1-214ENST00000485541 AKNAQ7Z591 1439 aa11.77□□□□□ -0.53
SRRM1-214ENST00000485541 CDK11AQ9UQ88 783 aaPredicted RBP11.76□□□□□ -0.53
SRRM1-214ENST00000485541 SETD5Q9C0A6 1442 aa11.76□□□□□ -0.53
SRRM1-214ENST00000485541 JPH4Q96JJ6 628 aa11.75□□□□□ -0.53
SRRM1-214ENST00000485541 ACIN1Q9UKV3 1341 aaKnown RBP11.75□□□□□ -0.53
SRRM1-214ENST00000485541 DHX57Q6P158 1386 aaKnown RBP11.75□□□□□ -0.53
SRRM1-214ENST00000485541 CLASP1Q7Z460 1538 aa11.74□□□□□ -0.53
SRRM1-214ENST00000485541 TROQ12816 1431 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-214ENST00000485541 DNMT1P26358 1616 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms