RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 ARHGEF11O15085 1522 aa19.7■□□□□ 0.74
APTX-227ENST00000485479 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
APTX-227ENST00000485479 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
APTX-227ENST00000485479 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
APTX-227ENST00000485479 ERCC6L2Q5T890 1561 aa19.68■□□□□ 0.74
APTX-227ENST00000485479 KIAA0586Q9BVV6 1533 aa19.64■□□□□ 0.73
APTX-227ENST00000485479 JPH4Q96JJ6 628 aa19.62■□□□□ 0.73
APTX-227ENST00000485479 SHROOM2Q13796 1616 aa19.62■□□□□ 0.73
APTX-227ENST00000485479 CTTNBP2Q8WZ74 1663 aa19.61■□□□□ 0.73
APTX-227ENST00000485479 KIF21BO75037 1637 aa19.61■□□□□ 0.73
APTX-227ENST00000485479 IQGAP2Q13576 1575 aa19.6■□□□□ 0.73
APTX-227ENST00000485479 RANGAP1P46060 587 aaPredicted RBP19.59■□□□□ 0.73
APTX-227ENST00000485479 PRG4Q92954 1404 aaPredicted RBP19.59■□□□□ 0.73
APTX-227ENST00000485479 ARAP1Q96P48 1450 aa19.57■□□□□ 0.72
APTX-227ENST00000485479 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
APTX-227ENST00000485479 CYB5RLQ6IPT4 315 aa19.55■□□□□ 0.72
APTX-227ENST00000485479 UBTFP17480 764 aaKnown RBP19.53■□□□□ 0.72
APTX-227ENST00000485479 GOLGA3Q08378 1498 aa19.52■□□□□ 0.72
APTX-227ENST00000485479 DISP1Q96F81 1524 aa19.47■□□□□ 0.71
APTX-227ENST00000485479 UGGT2Q9NYU1 1516 aa19.46■□□□□ 0.71
APTX-227ENST00000485479 P3H3Q8IVL6 736 aa19.46■□□□□ 0.71
APTX-227ENST00000485479 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
APTX-227ENST00000485479 KIAA0556O60303 1618 aa19.44■□□□□ 0.7
APTX-227ENST00000485479 CARMIL2Q6F5E8 1435 aa19.41■□□□□ 0.7
APTX-227ENST00000485479 TNIKQ9UKE5 1360 aa19.35■□□□□ 0.69
APTX-227ENST00000485479 PTPRGP23470 1445 aa19.35■□□□□ 0.69
APTX-227ENST00000485479 SAMD9Q5K651 1589 aa19.34■□□□□ 0.69
APTX-227ENST00000485479 FHOD3Q2V2M9 1422 aa19.33■□□□□ 0.69
APTX-227ENST00000485479 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
APTX-227ENST00000485479 PLB1Q6P1J6 1458 aa19.28■□□□□ 0.68
APTX-227ENST00000485479 ARHGAP35Q9NRY4 1499 aa19.27■□□□□ 0.68
APTX-227ENST00000485479 ARID3CA6NKF2 412 aa19.26■□□□□ 0.67
APTX-227ENST00000485479 EFCAB5A4FU69 1503 aa19.24■□□□□ 0.67
APTX-227ENST00000485479 UACAQ9BZF9 1416 aa19.22■□□□□ 0.67
APTX-227ENST00000485479 CLIP1P30622 1438 aa19.21■□□□□ 0.67
APTX-227ENST00000485479 CEP162Q5TB80 1403 aa19.2■□□□□ 0.66
APTX-227ENST00000485479 ABCC2Q92887 1545 aa19.19■□□□□ 0.66
APTX-227ENST00000485479 ABCA8O94911 1581 aa19.17■□□□□ 0.66
APTX-227ENST00000485479 RAPGEF6Q8TEU7 1601 aa19.14■□□□□ 0.65
APTX-227ENST00000485479 ATP1B4Q9UN42 357 aaPredicted RBP19.13■□□□□ 0.65
APTX-227ENST00000485479 NPM1P06748 294 aaKnown RBP eCLIP19.12■□□□□ 0.65
APTX-227ENST00000485479 UHRF1BP1LA0JNW5 1464 aa19.12■□□□□ 0.65
APTX-227ENST00000485479 ZCCHC11Q5TAX3 1644 aaKnown RBP19.12■□□□□ 0.65
APTX-227ENST00000485479 TRHP20396 242 aaPredicted RBP19.1■□□□□ 0.65
APTX-227ENST00000485479 NUP153P49790 1475 aaKnown RBP19.09■□□□□ 0.65
APTX-227ENST00000485479 KDM5BQ9UGL1 1544 aa19.08■□□□□ 0.64
APTX-227ENST00000485479 PCF11O94913 1555 aaKnown RBP19.07■□□□□ 0.64
APTX-227ENST00000485479 FMN1Q68DA7 1419 aa19.07■□□□□ 0.64
APTX-227ENST00000485479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
APTX-227ENST00000485479 HNRNPUL2Q1KMD3 747 aaKnown RBP19.06■□□□□ 0.64
APTX-227ENST00000485479 CDK13Q14004 1512 aaKnown RBP19.05■□□□□ 0.64
APTX-227ENST00000485479 ASXL2Q76L83 1435 aa19.04■□□□□ 0.64
APTX-227ENST00000485479 ATP10BO94823 1461 aa19.04■□□□□ 0.64
APTX-227ENST00000485479 MAPKBP1O60336 1514 aa19.03■□□□□ 0.64
APTX-227ENST00000485479 LRRIQ1Q96JM4 1722 aa19.03■□□□□ 0.64
APTX-227ENST00000485479 HECW1Q76N89 1606 aa19■□□□□ 0.63
APTX-227ENST00000485479 KIF13AQ9H1H9 1805 aa18.99■□□□□ 0.63
APTX-227ENST00000485479 KCNH8Q96L42 1107 aa18.97■□□□□ 0.63
APTX-227ENST00000485479 DIP2BQ9P265 1576 aa18.97■□□□□ 0.63
APTX-227ENST00000485479 FAM69CQ0P6D2 419 aa18.97■□□□□ 0.63
APTX-227ENST00000485479 EPRSP07814 1512 aaKnown RBP18.97■□□□□ 0.63
APTX-227ENST00000485479 CASKIN1Q8WXD9 1431 aa18.96■□□□□ 0.63
APTX-227ENST00000485479 ABCC10Q5T3U5 1492 aa18.95■□□□□ 0.62
APTX-227ENST00000485479 WDR7Q9Y4E6 1490 aa18.95■□□□□ 0.62
APTX-227ENST00000485479 FYCO1Q9BQS8 1478 aa18.93■□□□□ 0.62
APTX-227ENST00000485479 TSPOAP1O95153 1857 aa18.91■□□□□ 0.62
APTX-227ENST00000485479 VPS8Q8N3P4 1428 aa18.91■□□□□ 0.62
APTX-227ENST00000485479 MAGI3Q5TCQ9 1506 aa18.86■□□□□ 0.61
APTX-227ENST00000485479 PLEKHD1A6NEE1 506 aa18.86■□□□□ 0.61
APTX-227ENST00000485479 CCDC18Q5T9S5 1454 aa18.84■□□□□ 0.61
APTX-227ENST00000485479 KIF14Q15058 1648 aa18.82■□□□□ 0.6
APTX-227ENST00000485479 GLI2P10070 1586 aa18.8■□□□□ 0.6
APTX-227ENST00000485479 MAP3K4Q9Y6R4 1608 aa18.8■□□□□ 0.6
APTX-227ENST00000485479 TTC37Q6PGP7 1564 aa18.79■□□□□ 0.6
APTX-227ENST00000485479 PPRC1Q5VV67 1664 aaKnown RBP18.79■□□□□ 0.6
APTX-227ENST00000485479 TROQ12816 1431 aaPredicted RBP18.78■□□□□ 0.6
APTX-227ENST00000485479 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.78■□□□□ 0.6
APTX-227ENST00000485479 CDK11AQ9UQ88 783 aaPredicted RBP18.77■□□□□ 0.6
APTX-227ENST00000485479 CFAP43Q8NDM7 1665 aa18.77■□□□□ 0.6
APTX-227ENST00000485479 TIAM1Q13009 1591 aa18.76■□□□□ 0.59
APTX-227ENST00000485479 CD109Q6YHK3 1445 aa18.76■□□□□ 0.59
APTX-227ENST00000485479 ABCA9Q8IUA7 1624 aa18.76■□□□□ 0.59
APTX-227ENST00000485479 MTUS2Q5JR59 1369 aa18.74■□□□□ 0.59
APTX-227ENST00000485479 KANK4Q5T7N3 995 aaPredicted RBP18.73■□□□□ 0.59
APTX-227ENST00000485479 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
APTX-227ENST00000485479 EHBP1L1Q8N3D4 1523 aa18.68■□□□□ 0.58
APTX-227ENST00000485479 APLP2Q06481 763 aa18.67■□□□□ 0.58
APTX-227ENST00000485479 LRRC9Q6ZRR7 1453 aa18.67■□□□□ 0.58
APTX-227ENST00000485479 MYO5CQ9NQX4 1742 aa18.65■□□□□ 0.58
APTX-227ENST00000485479 TEX14Q8IWB6 1497 aa18.63■□□□□ 0.57
APTX-227ENST00000485479 COL17A1Q9UMD9 1497 aaPredicted RBP18.63■□□□□ 0.57
APTX-227ENST00000485479 CDC42BPAQ5VT25 1732 aa18.63■□□□□ 0.57
APTX-227ENST00000485479 KDM6BO15054 1643 aa18.62■□□□□ 0.57
APTX-227ENST00000485479 CDC42BPBQ9Y5S2 1711 aa18.62■□□□□ 0.57
APTX-227ENST00000485479 FANCAO15360 1455 aa18.62■□□□□ 0.57
APTX-227ENST00000485479 NCOA2Q15596 1464 aa18.61■□□□□ 0.57
APTX-227ENST00000485479 ARHGAP5Q13017 1502 aa18.61■□□□□ 0.57
APTX-227ENST00000485479 SUPT6HQ7KZ85 1726 aaKnown RBP18.61■□□□□ 0.57
APTX-227ENST00000485479 PLCH2O75038 1416 aa18.61■□□□□ 0.57
APTX-227ENST00000485479 MAP3K1Q13233 1512 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms