RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 ARHGEF11O15085 1522 aa30.52■■■□□ 2.48
ERCC2-205ENST00000485403 RIMBP3CA6NJZ7 1639 aa30.49■■■□□ 2.47
ERCC2-205ENST00000485403 RIMBP3BA6NNM3 1639 aa30.49■■■□□ 2.47
ERCC2-205ENST00000485403 RIMBP3Q9UFD9 1639 aa30.49■■■□□ 2.47
ERCC2-205ENST00000485403 KIF21BO75037 1637 aa30.46■■■□□ 2.47
ERCC2-205ENST00000485403 IQGAP2Q13576 1575 aa30.41■■■□□ 2.46
ERCC2-205ENST00000485403 CTTNBP2Q8WZ74 1663 aa30.41■■■□□ 2.46
ERCC2-205ENST00000485403 JPH4Q96JJ6 628 aa30.39■■■□□ 2.46
ERCC2-205ENST00000485403 ERCC6L2Q5T890 1561 aa30.34■■■□□ 2.45
ERCC2-205ENST00000485403 PRG4Q92954 1404 aaPredicted RBP30.33■■■□□ 2.45
ERCC2-205ENST00000485403 ARAP1Q96P48 1450 aa30.3■■■□□ 2.44
ERCC2-205ENST00000485403 UGGT2Q9NYU1 1516 aa30.27■■■□□ 2.44
ERCC2-205ENST00000485403 GOLGA3Q08378 1498 aa30.27■■■□□ 2.44
ERCC2-205ENST00000485403 DISP1Q96F81 1524 aa30.18■■■□□ 2.42
ERCC2-205ENST00000485403 CARMIL2Q6F5E8 1435 aa30.15■■■□□ 2.42
ERCC2-205ENST00000485403 CYB5RLQ6IPT4 315 aa30.15■■■□□ 2.42
ERCC2-205ENST00000485403 KIAA0556O60303 1618 aa30.12■■■□□ 2.41
ERCC2-205ENST00000485403 UBTFP17480 764 aaKnown RBP30.08■■■□□ 2.41
ERCC2-205ENST00000485403 EHMT2Q96KQ7 1210 aa30.08■■■□□ 2.41
ERCC2-205ENST00000485403 TNIKQ9UKE5 1360 aa30.05■■■□□ 2.4
ERCC2-205ENST00000485403 SAMD9Q5K651 1589 aa30.04■■■□□ 2.4
ERCC2-205ENST00000485403 LOC105371045A0A1W2PR82 267 aa30.02■■■□□ 2.4
ERCC2-205ENST00000485403 PTPRGP23470 1445 aa29.99■■■□□ 2.39
ERCC2-205ENST00000485403 EFCAB5A4FU69 1503 aa29.95■■■□□ 2.38
ERCC2-205ENST00000485403 ADCY10Q96PN6 1610 aa29.87■■■□□ 2.37
ERCC2-205ENST00000485403 RANGAP1P46060 587 aaPredicted RBP29.87■■■□□ 2.37
ERCC2-205ENST00000485403 TTBK1Q5TCY1 1321 aaPredicted RBP29.84■■■□□ 2.37
ERCC2-205ENST00000485403 P3H3Q8IVL6 736 aa29.84■■■□□ 2.37
ERCC2-205ENST00000485403 ARHGAP35Q9NRY4 1499 aa29.83■■■□□ 2.37
ERCC2-205ENST00000485403 UHRF1BP1LA0JNW5 1464 aa29.82■■■□□ 2.36
ERCC2-205ENST00000485403 UACAQ9BZF9 1416 aa29.82■■■□□ 2.36
ERCC2-205ENST00000485403 FHOD3Q2V2M9 1422 aa29.81■■■□□ 2.36
ERCC2-205ENST00000485403 ABCC2Q92887 1545 aa29.79■■■□□ 2.36
ERCC2-205ENST00000485403 ABCA8O94911 1581 aa29.78■■■□□ 2.36
ERCC2-205ENST00000485403 PLB1Q6P1J6 1458 aa29.77■■■□□ 2.36
ERCC2-205ENST00000485403 CLIP1P30622 1438 aa29.72■■■□□ 2.35
ERCC2-205ENST00000485403 KDM5BQ9UGL1 1544 aa29.67■■■□□ 2.34
ERCC2-205ENST00000485403 RAPGEF6Q8TEU7 1601 aa29.66■■■□□ 2.34
ERCC2-205ENST00000485403 CEP162Q5TB80 1403 aa29.66■■■□□ 2.34
ERCC2-205ENST00000485403 FMN1Q68DA7 1419 aa29.64■■■□□ 2.34
ERCC2-205ENST00000485403 MAPKBP1O60336 1514 aa29.64■■■□□ 2.34
ERCC2-205ENST00000485403 NPM1P06748 294 aaKnown RBP eCLIP29.63■■■□□ 2.33
ERCC2-205ENST00000485403 ZCCHC11Q5TAX3 1644 aaKnown RBP29.6■■■□□ 2.33
ERCC2-205ENST00000485403 NUP153P49790 1475 aaKnown RBP29.57■■■□□ 2.32
ERCC2-205ENST00000485403 ATP10BO94823 1461 aa29.51■■■□□ 2.31
ERCC2-205ENST00000485403 ASXL2Q76L83 1435 aa29.49■■■□□ 2.31
ERCC2-205ENST00000485403 HECW1Q76N89 1606 aa29.48■■■□□ 2.31
ERCC2-205ENST00000485403 PCF11O94913 1555 aaKnown RBP29.46■■■□□ 2.31
ERCC2-205ENST00000485403 CASKIN1Q8WXD9 1431 aa29.45■■■□□ 2.31
ERCC2-205ENST00000485403 ABCC10Q5T3U5 1492 aa29.44■■■□□ 2.3
ERCC2-205ENST00000485403 KIF13AQ9H1H9 1805 aa29.43■■■□□ 2.3
ERCC2-205ENST00000485403 DIP2BQ9P265 1576 aa29.41■■■□□ 2.3
ERCC2-205ENST00000485403 FYCO1Q9BQS8 1478 aa29.41■■■□□ 2.3
ERCC2-205ENST00000485403 ARID3CA6NKF2 412 aa29.4■■■□□ 2.3
ERCC2-205ENST00000485403 WDR7Q9Y4E6 1490 aa29.4■■■□□ 2.3
ERCC2-205ENST00000485403 EPRSP07814 1512 aaKnown RBP29.39■■■□□ 2.3
ERCC2-205ENST00000485403 LRRIQ1Q96JM4 1722 aa29.39■■■□□ 2.3
ERCC2-205ENST00000485403 TRHP20396 242 aaPredicted RBP29.39■■■□□ 2.3
ERCC2-205ENST00000485403 CDK13Q14004 1512 aaKnown RBP29.36■■■□□ 2.29
ERCC2-205ENST00000485403 GLI2P10070 1586 aa29.32■■■□□ 2.28
ERCC2-205ENST00000485403 ATP1B4Q9UN42 357 aaPredicted RBP29.31■■■□□ 2.28
ERCC2-205ENST00000485403 VPS8Q8N3P4 1428 aa29.3■■■□□ 2.28
ERCC2-205ENST00000485403 CCDC18Q5T9S5 1454 aa29.3■■■□□ 2.28
ERCC2-205ENST00000485403 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.3■■■□□ 2.28
ERCC2-205ENST00000485403 FAM69CQ0P6D2 419 aa29.3■■■□□ 2.28
ERCC2-205ENST00000485403 HNRNPUL2Q1KMD3 747 aaKnown RBP29.3■■■□□ 2.28
ERCC2-205ENST00000485403 PLEKHD1A6NEE1 506 aa29.23■■■□□ 2.27
ERCC2-205ENST00000485403 MAP3K4Q9Y6R4 1608 aa29.2■■■□□ 2.26
ERCC2-205ENST00000485403 KCNH8Q96L42 1107 aa29.19■■■□□ 2.26
ERCC2-205ENST00000485403 CDK11AQ9UQ88 783 aaPredicted RBP29.18■■■□□ 2.26
ERCC2-205ENST00000485403 CFAP43Q8NDM7 1665 aa29.16■■■□□ 2.26
ERCC2-205ENST00000485403 ABCA9Q8IUA7 1624 aa29.16■■■□□ 2.26
ERCC2-205ENST00000485403 TSPOAP1O95153 1857 aa29.14■■■□□ 2.25
ERCC2-205ENST00000485403 TROQ12816 1431 aaPredicted RBP29.14■■■□□ 2.25
ERCC2-205ENST00000485403 MAGI3Q5TCQ9 1506 aa29.13■■■□□ 2.25
ERCC2-205ENST00000485403 PPRC1Q5VV67 1664 aaKnown RBP29.12■■■□□ 2.25
ERCC2-205ENST00000485403 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.08■■■□□ 2.258e-6■□□□□ 10.5
ERCC2-205ENST00000485403 CD109Q6YHK3 1445 aa29.07■■■□□ 2.24
ERCC2-205ENST00000485403 TIAM1Q13009 1591 aa29.06■■■□□ 2.24
ERCC2-205ENST00000485403 KIF14Q15058 1648 aa29.06■■■□□ 2.24
ERCC2-205ENST00000485403 MAP3K1Q13233 1512 aa29.05■■■□□ 2.24
ERCC2-205ENST00000485403 TTC37Q6PGP7 1564 aa29.05■■■□□ 2.24
ERCC2-205ENST00000485403 TEX14Q8IWB6 1497 aa28.99■■■□□ 2.23
ERCC2-205ENST00000485403 EHBP1L1Q8N3D4 1523 aa28.99■■■□□ 2.23
ERCC2-205ENST00000485403 MTUS2Q5JR59 1369 aa28.97■■■□□ 2.23
ERCC2-205ENST00000485403 MYO5CQ9NQX4 1742 aa28.93■■■□□ 2.22
ERCC2-205ENST00000485403 LRRC9Q6ZRR7 1453 aa28.92■■■□□ 2.22
ERCC2-205ENST00000485403 ARAP3Q8WWN8 1544 aa28.9■■■□□ 2.22
ERCC2-205ENST00000485403 PLCH2O75038 1416 aa28.9■■■□□ 2.22
ERCC2-205ENST00000485403 NEO1Q92859 1461 aa28.86■■■□□ 2.21
ERCC2-205ENST00000485403 CDC42BPAQ5VT25 1732 aa28.86■■■□□ 2.21
ERCC2-205ENST00000485403 SUPT6HQ7KZ85 1726 aaKnown RBP28.86■■■□□ 2.21
ERCC2-205ENST00000485403 APLP2Q06481 763 aa28.85■■■□□ 2.21
ERCC2-205ENST00000485403 PREX2Q70Z35 1606 aa28.85■■■□□ 2.21
ERCC2-205ENST00000485403 KANK4Q5T7N3 995 aaPredicted RBP28.84■■■□□ 2.21
ERCC2-205ENST00000485403 CDC42BPBQ9Y5S2 1711 aa28.84■■■□□ 2.21
ERCC2-205ENST00000485403 CFAP74Q9C0B2 1584 aa28.83■■■□□ 2.21
ERCC2-205ENST00000485403 PHLDB1Q86UU1 1377 aa28.83■■■□□ 2.21
ERCC2-205ENST00000485403 KDM6BO15054 1643 aa28.83■■■□□ 2.21
ERCC2-205ENST00000485403 FANCAO15360 1455 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms