RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 ZNF608Q9ULD9 1512 aaPredicted RBP22.26■■□□□ 1.15
TTC3-219ENST00000485402 WDR97A6NE52 1622 aa22.26■■□□□ 1.15
TTC3-219ENST00000485402 THOC2Q8NI27 1593 aaKnown RBP22.24■■□□□ 1.15
TTC3-219ENST00000485402 IFT140Q96RY7 1462 aa22.24■■□□□ 1.15
TTC3-219ENST00000485402 ABCA5Q8WWZ7 1642 aa22.22■■□□□ 1.15
TTC3-219ENST00000485402 P3H3Q8IVL6 736 aa22.17■■□□□ 1.14
TTC3-219ENST00000485402 HNRNPUL2Q1KMD3 747 aaKnown RBP22.15■■□□□ 1.14
TTC3-219ENST00000485402 ZNF316A6NFI3 1004 aaPredicted RBP22.14■■□□□ 1.13
TTC3-219ENST00000485402 CUL7Q14999 1698 aa22.14■■□□□ 1.13
TTC3-219ENST00000485402 FBLN2P98095 1184 aa22.13■■□□□ 1.13
TTC3-219ENST00000485402 GRIN2BQ13224 1484 aa22.12■■□□□ 1.13
TTC3-219ENST00000485402 APLP2Q06481 763 aa22.11■■□□□ 1.13
TTC3-219ENST00000485402 VPS8Q8N3P4 1428 aa22.07■■□□□ 1.12
TTC3-219ENST00000485402 PBRM1Q86U86 1689 aa22.06■■□□□ 1.12
TTC3-219ENST00000485402 FHAD1B1AJZ9 1412 aa22.05■■□□□ 1.12
TTC3-219ENST00000485402 ARAP1Q96P48 1450 aa22.04■■□□□ 1.12
TTC3-219ENST00000485402 ARHGAP35Q9NRY4 1499 aa22.04■■□□□ 1.12
TTC3-219ENST00000485402 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
TTC3-219ENST00000485402 MIER1Q8N108 512 aa22.04■■□□□ 1.12
TTC3-219ENST00000485402 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
TTC3-219ENST00000485402 SNAPC4Q5SXM2 1469 aa22.03■■□□□ 1.12
TTC3-219ENST00000485402 ATP1B4Q9UN42 357 aaPredicted RBP22.03■■□□□ 1.12
TTC3-219ENST00000485402 ADAMTS12P58397 1594 aa21.96■■□□□ 1.11
TTC3-219ENST00000485402 FHOD3Q2V2M9 1422 aa21.93■■□□□ 1.1
TTC3-219ENST00000485402 CTTNBP2Q8WZ74 1663 aa21.91■■□□□ 1.1
TTC3-219ENST00000485402 MYT1Q01538 1121 aa21.9■■□□□ 1.1
TTC3-219ENST00000485402 MAGI1Q96QZ7 1491 aaPredicted RBP21.87■■□□□ 1.09
TTC3-219ENST00000485402 GRIN2AQ12879 1464 aa21.85■■□□□ 1.09
TTC3-219ENST00000485402 KANK4Q5T7N3 995 aaPredicted RBP21.85■■□□□ 1.09
TTC3-219ENST00000485402 SYNJ2O15056 1496 aa21.84■■□□□ 1.09
TTC3-219ENST00000485402 IQGAP2Q13576 1575 aa21.78■■□□□ 1.08
TTC3-219ENST00000485402 EFCAB5A4FU69 1503 aa21.78■■□□□ 1.08
TTC3-219ENST00000485402 KIAA0586Q9BVV6 1533 aa21.75■■□□□ 1.07
TTC3-219ENST00000485402 ARID3CA6NKF2 412 aa21.73■■□□□ 1.07
TTC3-219ENST00000485402 FMN1Q68DA7 1419 aa21.71■■□□□ 1.07
TTC3-219ENST00000485402 JPH4Q96JJ6 628 aa21.71■■□□□ 1.07
TTC3-219ENST00000485402 CEP170Q5SW79 1584 aa21.69■■□□□ 1.06
TTC3-219ENST00000485402 PCF11O94913 1555 aaKnown RBP21.68■■□□□ 1.06
TTC3-219ENST00000485402 SAMD9Q5K651 1589 aa21.67■■□□□ 1.06
TTC3-219ENST00000485402 NUP160Q12769 1436 aa21.64■■□□□ 1.05
TTC3-219ENST00000485402 CASKIN1Q8WXD9 1431 aa21.64■■□□□ 1.05
TTC3-219ENST00000485402 UGGT2Q9NYU1 1516 aa21.61■■□□□ 1.05
TTC3-219ENST00000485402 FYCO1Q9BQS8 1478 aa21.6■■□□□ 1.05
TTC3-219ENST00000485402 TIAM1Q13009 1591 aa21.59■■□□□ 1.05
TTC3-219ENST00000485402 DISP1Q96F81 1524 aa21.58■■□□□ 1.05
TTC3-219ENST00000485402 CHD1O14646 1710 aa21.56■■□□□ 1.04
TTC3-219ENST00000485402 CARMIL2Q6F5E8 1435 aa21.55■■□□□ 1.04
TTC3-219ENST00000485402 LRRC9Q6ZRR7 1453 aa21.55■■□□□ 1.04
TTC3-219ENST00000485402 ITGAEP38570 1179 aa21.54■■□□□ 1.04
TTC3-219ENST00000485402 KIAA0556O60303 1618 aa21.53■■□□□ 1.04
TTC3-219ENST00000485402 MTUS2Q5JR59 1369 aa21.53■■□□□ 1.04
TTC3-219ENST00000485402 PRG4Q92954 1404 aaPredicted RBP21.5■■□□□ 1.03
TTC3-219ENST00000485402 MAP3K1Q13233 1512 aa21.49■■□□□ 1.03
TTC3-219ENST00000485402 FAM50AQ14320 339 aaKnown RBP21.46■■□□□ 1.03
TTC3-219ENST00000485402 SUPT16HQ9Y5B9 1047 aaKnown RBP21.46■■□□□ 1.03
TTC3-219ENST00000485402 PHLDB1Q86UU1 1377 aa21.44■■□□□ 1.02
TTC3-219ENST00000485402 CFAP43Q8NDM7 1665 aa21.43■■□□□ 1.02
TTC3-219ENST00000485402 PLB1Q6P1J6 1458 aa21.43■■□□□ 1.02
TTC3-219ENST00000485402 CDK13Q14004 1512 aaKnown RBP21.43■■□□□ 1.02
TTC3-219ENST00000485402 BCANQ96GW7 911 aa21.42■■□□□ 1.02
TTC3-219ENST00000485402 CCNB3Q8WWL7 1395 aa21.41■■□□□ 1.02
TTC3-219ENST00000485402 EPRSP07814 1512 aaKnown RBP21.41■■□□□ 1.02
TTC3-219ENST00000485402 HECW1Q76N89 1606 aa21.4■■□□□ 1.02
TTC3-219ENST00000485402 LRRIQ1Q96JM4 1722 aa21.4■■□□□ 1.02
TTC3-219ENST00000485402 PTPRGP23470 1445 aa21.39■■□□□ 1.01
TTC3-219ENST00000485402 CCDC18Q5T9S5 1454 aa21.37■■□□□ 1.01
TTC3-219ENST00000485402 RRBP1Q9P2E9 1410 aaKnown RBP21.36■■□□□ 1.01
TTC3-219ENST00000485402 NUP153P49790 1475 aaKnown RBP21.35■■□□□ 1.01
TTC3-219ENST00000485402 CDK11AQ9UQ88 783 aaPredicted RBP21.35■■□□□ 1.01
TTC3-219ENST00000485402 RAPGEF6Q8TEU7 1601 aa21.34■■□□□ 1.01
TTC3-219ENST00000485402 KCNH8Q96L42 1107 aa21.32■■□□□ 1
TTC3-219ENST00000485402 MAGI3Q5TCQ9 1506 aa21.32■■□□□ 1
TTC3-219ENST00000485402 OSCARQ8IYS5 282 aa21.31■■□□□ 1
TTC3-219ENST00000485402 ERCC6L2Q5T890 1561 aa21.31■■□□□ 1
TTC3-219ENST00000485402 NCOA2Q15596 1464 aa21.3■■□□□ 1
TTC3-219ENST00000485402 EHBP1L1Q8N3D4 1523 aa21.27■■□□□ 1
TTC3-219ENST00000485402 PLEKHD1A6NEE1 506 aa21.25■□□□□ 0.99
TTC3-219ENST00000485402 TSHZ2Q9NRE2 1034 aa21.25■□□□□ 0.99
TTC3-219ENST00000485402 DHX57Q6P158 1386 aaKnown RBP21.24■□□□□ 0.99
TTC3-219ENST00000485402 CLASP1Q7Z460 1538 aa21.24■□□□□ 0.99
TTC3-219ENST00000485402 SUPT6HQ7KZ85 1726 aaKnown RBP21.23■□□□□ 0.99
TTC3-219ENST00000485402 SHROOM2Q13796 1616 aa21.23■□□□□ 0.99
TTC3-219ENST00000485402 FGD6Q6ZV73 1430 aa21.22■□□□□ 0.99
TTC3-219ENST00000485402 MYOM3Q5VTT5 1437 aa21.2■□□□□ 0.99
TTC3-219ENST00000485402 ABCA8O94911 1581 aa21.19■□□□□ 0.98
TTC3-219ENST00000485402 UACAQ9BZF9 1416 aa21.19■□□□□ 0.98
TTC3-219ENST00000485402 ATP10BO94823 1461 aa21.19■□□□□ 0.98
TTC3-219ENST00000485402 ZNF777Q9ULD5 760 aaPredicted RBP21.16■□□□□ 0.98
TTC3-219ENST00000485402 FKBP8Q14318 412 aa21.16■□□□□ 0.98
TTC3-219ENST00000485402 DDX10Q13206 875 aaKnown RBP21.15■□□□□ 0.98
TTC3-219ENST00000485402 TROQ12816 1431 aaPredicted RBP21.15■□□□□ 0.98
TTC3-219ENST00000485402 HIRIP3Q9BW71 556 aaPredicted RBP21.14■□□□□ 0.98
TTC3-219ENST00000485402 CHIC2Q9UKJ5 165 aa21.13■□□□□ 0.97
TTC3-219ENST00000485402 ZNF644Q9H582 1327 aaPredicted RBP21.11■□□□□ 0.97
TTC3-219ENST00000485402 CFDP1Q9UEE9 299 aaPredicted RBP21.11■□□□□ 0.97
TTC3-219ENST00000485402 CLSPNQ9HAW4 1339 aa21.11■□□□□ 0.97
TTC3-219ENST00000485402 ARHGEF11O15085 1522 aa21.09■□□□□ 0.97
TTC3-219ENST00000485402 ANP32EQ9BTT0 268 aa21.09■□□□□ 0.97
TTC3-219ENST00000485402 RAB3GAP2Q9H2M9 1393 aa21.05■□□□□ 0.96
TTC3-219ENST00000485402 PTPN23Q9H3S7 1636 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms