RNA–Protein interactions for RNA: ENST00000485149.1

SORT1-206, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 442 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-206ENST00000485149 AMER1Q5JTC6 1135 aaPredicted RBP11.7□□□□□ -0.54
SORT1-206ENST00000485149 SPINK5Q9NQ38 1064 aaPredicted RBP11.7□□□□□ -0.54
SORT1-206ENST00000485149 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
SORT1-206ENST00000485149 CAPN15O75808 1086 aa11.69□□□□□ -0.54
SORT1-206ENST00000485149 ATXN8OSP0DMR3 200 aa11.69□□□□□ -0.54
SORT1-206ENST00000485149 ABCC8Q09428 1581 aa11.69□□□□□ -0.54
SORT1-206ENST00000485149 TOP2AP11388 1531 aaKnown RBP11.69□□□□□ -0.54
SORT1-206ENST00000485149 FBLN2P98095 1184 aa11.68□□□□□ -0.54
SORT1-206ENST00000485149 AQRO60306 1485 aaKnown RBP eCLIP11.67□□□□□ -0.54
SORT1-206ENST00000485149 TARBP1Q13395 1621 aaKnown RBP11.64□□□□□ -0.55
SORT1-206ENST00000485149 DNMBPQ6XZF7 1577 aa11.63□□□□□ -0.55
SORT1-206ENST00000485149 CLASP1Q7Z460 1538 aa11.63□□□□□ -0.55
SORT1-206ENST00000485149 SYNJ1O43426 1573 aa11.59□□□□□ -0.55
SORT1-206ENST00000485149 DSG3P32926 999 aa11.58□□□□□ -0.56
SORT1-206ENST00000485149 POLA1P09884 1462 aaPredicted RBP11.56□□□□□ -0.56
SORT1-206ENST00000485149 SNAPC4Q5SXM2 1469 aa11.55□□□□□ -0.56
SORT1-206ENST00000485149 SOCS7O14512 581 aa11.54□□□□□ -0.56
SORT1-206ENST00000485149 CCDC88BA6NC98 1476 aa11.54□□□□□ -0.56
SORT1-206ENST00000485149 GAPVD1Q14C86 1478 aa11.54□□□□□ -0.56
SORT1-206ENST00000485149 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
SORT1-206ENST00000485149 CHMP7Q8WUX9 453 aaPredicted RBP11.53□□□□□ -0.56
SORT1-206ENST00000485149 TDRD9Q8NDG6 1382 aaKnown RBP11.52□□□□□ -0.57
SORT1-206ENST00000485149 MAGI1Q96QZ7 1491 aaPredicted RBP11.51□□□□□ -0.57
SORT1-206ENST00000485149 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
SORT1-206ENST00000485149 ATF5Q9Y2D1 282 aaPredicted RBP11.49□□□□□ -0.57
SORT1-206ENST00000485149 SOGA1O94964 1423 aa11.49□□□□□ -0.57
SORT1-206ENST00000485149 SYNJ2O15056 1496 aa11.48□□□□□ -0.57
SORT1-206ENST00000485149 LMTK3Q96Q04 1460 aa11.47□□□□□ -0.57
SORT1-206ENST00000485149 GRIN2BQ13224 1484 aa11.46□□□□□ -0.57
SORT1-206ENST00000485149 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
SORT1-206ENST00000485149 KIF13AQ9H1H9 1805 aa11.4□□□□□ -0.58
SORT1-206ENST00000485149 ABCB7O75027 752 aa11.4□□□□□ -0.58
SORT1-206ENST00000485149 POLA2Q14181 598 aa11.39□□□□□ -0.59
SORT1-206ENST00000485149 ERCC6L2Q5T890 1561 aa11.38□□□□□ -0.59
SORT1-206ENST00000485149 FBXO41Q8TF61 875 aa11.38□□□□□ -0.59
SORT1-206ENST00000485149 PBRM1Q86U86 1689 aa11.38□□□□□ -0.59
SORT1-206ENST00000485149 ILDR2Q71H61 639 aa11.36□□□□□ -0.59
SORT1-206ENST00000485149 KDM4FA0A1W2PPD8 638 aa11.35□□□□□ -0.59
SORT1-206ENST00000485149 CEP170Q5SW79 1584 aa11.34□□□□□ -0.59
SORT1-206ENST00000485149 ZBTB12Q9Y330 459 aaPredicted RBP11.33□□□□□ -0.6
SORT1-206ENST00000485149 CUX1P39880 1505 aa11.32□□□□□ -0.6
SORT1-206ENST00000485149 DAXXQ9UER7 740 aaPredicted RBP11.32□□□□□ -0.6
SORT1-206ENST00000485149 GRIN2AQ12879 1464 aa11.32□□□□□ -0.6
SORT1-206ENST00000485149 ABCC10Q5T3U5 1492 aa11.31□□□□□ -0.6
SORT1-206ENST00000485149 SHROOM2Q13796 1616 aa11.31□□□□□ -0.6
SORT1-206ENST00000485149 ABCA5Q8WWZ7 1642 aa11.3□□□□□ -0.6
SORT1-206ENST00000485149 NUP160Q12769 1436 aa11.29□□□□□ -0.6
SORT1-206ENST00000485149 KDM6BO15054 1643 aa11.29□□□□□ -0.6
SORT1-206ENST00000485149 FAM69CQ0P6D2 419 aa11.29□□□□□ -0.6
SORT1-206ENST00000485149 ABCA10Q8WWZ4 1543 aa11.27□□□□□ -0.61
SORT1-206ENST00000485149 DIP2BQ9P265 1576 aa11.26□□□□□ -0.61
SORT1-206ENST00000485149 MAPKBP1O60336 1514 aa11.25□□□□□ -0.61
SORT1-206ENST00000485149 ADAMTS12P58397 1594 aa11.24□□□□□ -0.61
SORT1-206ENST00000485149 NPM1P06748 294 aaKnown RBP eCLIP11.23□□□□□ -0.61
SORT1-206ENST00000485149 PRG4Q92954 1404 aaPredicted RBP11.21□□□□□ -0.61
SORT1-206ENST00000485149 FHAD1B1AJZ9 1412 aa11.19□□□□□ -0.62
SORT1-206ENST00000485149 HECW2Q9P2P5 1572 aa11.18□□□□□ -0.62
SORT1-206ENST00000485149 ADGRL1O94910 1474 aa11.18□□□□□ -0.62
SORT1-206ENST00000485149 DISP3Q9P2K9 1392 aa11.16□□□□□ -0.62
SORT1-206ENST00000485149 TSPOAP1O95153 1857 aa11.15□□□□□ -0.62
SORT1-206ENST00000485149 JPH4Q96JJ6 628 aa11.15□□□□□ -0.62
SORT1-206ENST00000485149 ADCY10Q96PN6 1610 aa11.15□□□□□ -0.62
SORT1-206ENST00000485149 RBM42Q9BTD8 480 aaKnown RBP11.13□□□□□ -0.63
SORT1-206ENST00000485149 ERICH3Q5RHP9 1530 aa11.13□□□□□ -0.63
SORT1-206ENST00000485149 WRNQ14191 1432 aaPredicted RBP eCLIP11.12□□□□□ -0.63
SORT1-206ENST00000485149 PRKCSHP14314 528 aaPredicted RBP11.12□□□□□ -0.63
SORT1-206ENST00000485149 RUSC2Q8N2Y8 1516 aa11.1□□□□□ -0.63
SORT1-206ENST00000485149 PPRC1Q5VV67 1664 aaKnown RBP11.05□□□□□ -0.64
SORT1-206ENST00000485149 GLI2P10070 1586 aa11.04□□□□□ -0.64
SORT1-206ENST00000485149 BIVM-ERCC5R4GMW8 1640 aa11.04□□□□□ -0.64
SORT1-206ENST00000485149 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
SORT1-206ENST00000485149 TOP2BQ02880 1626 aa11.02□□□□□ -0.64
SORT1-206ENST00000485149 PLB1Q6P1J6 1458 aa11.01□□□□□ -0.65
SORT1-206ENST00000485149 COL17A1Q9UMD9 1497 aaPredicted RBP11□□□□□ -0.65
SORT1-206ENST00000485149 ABCC2Q92887 1545 aa10.99□□□□□ -0.65
SORT1-206ENST00000485149 KIAA0586Q9BVV6 1533 aa10.99□□□□□ -0.65
SORT1-206ENST00000485149 ASXL2Q76L83 1435 aa10.99□□□□□ -0.65
SORT1-206ENST00000485149 TEX14Q8IWB6 1497 aa10.99□□□□□ -0.65
SORT1-206ENST00000485149 SPDYE2BA6NHP3 402 aa10.97□□□□□ -0.65
SORT1-206ENST00000485149 SPDYE6P0CI01 402 aa10.97□□□□□ -0.65
SORT1-206ENST00000485149 SPDYE2Q495Y8 402 aa10.97□□□□□ -0.65
SORT1-206ENST00000485149 PTPRGP23470 1445 aa10.97□□□□□ -0.65
SORT1-206ENST00000485149 MAP3K4Q9Y6R4 1608 aa10.96□□□□□ -0.65
SORT1-206ENST00000485149 SUPT5HO00267 1087 aaKnown RBP10.94□□□□□ -0.66
SORT1-206ENST00000485149 CUL7Q14999 1698 aa10.94□□□□□ -0.66
SORT1-206ENST00000485149 EPRSP07814 1512 aaKnown RBP10.94□□□□□ -0.66
SORT1-206ENST00000485149 AKT1S1Q96B36 256 aa10.93□□□□□ -0.66
SORT1-206ENST00000485149 UHRF1BP1LA0JNW5 1464 aa10.93□□□□□ -0.66
SORT1-206ENST00000485149 TNIKQ9UKE5 1360 aa10.92□□□□□ -0.66
SORT1-206ENST00000485149 CARMIL2Q6F5E8 1435 aa10.91□□□□□ -0.66
SORT1-206ENST00000485149 TTBK1Q5TCY1 1321 aaPredicted RBP10.89□□□□□ -0.67
SORT1-206ENST00000485149 ARXQ96QS3 562 aa10.89□□□□□ -0.67
SORT1-206ENST00000485149 TAOK2Q9UL54 1235 aa10.89□□□□□ -0.67
SORT1-206ENST00000485149 UACAQ9BZF9 1416 aa10.88□□□□□ -0.67
SORT1-206ENST00000485149 KDM5BQ9UGL1 1544 aa10.88□□□□□ -0.67
SORT1-206ENST00000485149 BCANQ96GW7 911 aa10.85□□□□□ -0.67
SORT1-206ENST00000485149 SSUH2Q9Y2M2 353 aa10.85□□□□□ -0.67
SORT1-206ENST00000485149 KIF21BO75037 1637 aa10.84□□□□□ -0.67
SORT1-206ENST00000485149 ZCCHC11Q5TAX3 1644 aaKnown RBP10.84□□□□□ -0.67
SORT1-206ENST00000485149 IGF1RP08069 1367 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms