RNA–Protein interactions for RNA: ENST00000484873.6

CAPN8-210, Transcript of calpain 8, humanhuman

TSL 3

Gene CAPN8, Length 364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-210ENST00000484873 RAD54L2Q9Y4B4 1467 aa7.5□□□□□ -1.21
CAPN8-210ENST00000484873 POTEDQ86YR6 584 aa7.5□□□□□ -1.21
CAPN8-210ENST00000484873 TSPOAP1O95153 1857 aa7.46□□□□□ -1.22
CAPN8-210ENST00000484873 SHROOM2Q13796 1616 aa7.44□□□□□ -1.22
CAPN8-210ENST00000484873 NUP160Q12769 1436 aa7.43□□□□□ -1.22
CAPN8-210ENST00000484873 GRIN2AQ12879 1464 aa7.43□□□□□ -1.22
CAPN8-210ENST00000484873 TOP2AP11388 1531 aaKnown RBP7.42□□□□□ -1.22
CAPN8-210ENST00000484873 PRG4Q92954 1404 aaPredicted RBP7.42□□□□□ -1.22
CAPN8-210ENST00000484873 PCF11O94913 1555 aaKnown RBP7.42□□□□□ -1.22
CAPN8-210ENST00000484873 COL17A1Q9UMD9 1497 aaPredicted RBP7.41□□□□□ -1.22
CAPN8-210ENST00000484873 ADCY10Q96PN6 1610 aa7.38□□□□□ -1.23
CAPN8-210ENST00000484873 PTPRMP28827 1452 aa7.38□□□□□ -1.23
CAPN8-210ENST00000484873 FGD5Q6ZNL6 1462 aa7.38□□□□□ -1.23
CAPN8-210ENST00000484873 TEX14Q8IWB6 1497 aa7.37□□□□□ -1.23
CAPN8-210ENST00000484873 PBRM1Q86U86 1689 aa7.37□□□□□ -1.23
CAPN8-210ENST00000484873 PPRC1Q5VV67 1664 aaKnown RBP7.36□□□□□ -1.23
CAPN8-210ENST00000484873 JPH4Q96JJ6 628 aa7.36□□□□□ -1.23
CAPN8-210ENST00000484873 GLI2P10070 1586 aa7.36□□□□□ -1.23
CAPN8-210ENST00000484873 CCDC88BA6NC98 1476 aa7.34□□□□□ -1.23
CAPN8-210ENST00000484873 PLB1Q6P1J6 1458 aa7.33□□□□□ -1.24
CAPN8-210ENST00000484873 HSPA2P54652 639 aa7.32□□□□□ -1.24
CAPN8-210ENST00000484873 ASXL2Q76L83 1435 aa7.31□□□□□ -1.24
CAPN8-210ENST00000484873 ADAMTS12P58397 1594 aa7.3□□□□□ -1.24
CAPN8-210ENST00000484873 FHAD1B1AJZ9 1412 aa7.29□□□□□ -1.24
CAPN8-210ENST00000484873 ABCA5Q8WWZ7 1642 aa7.29□□□□□ -1.24
CAPN8-210ENST00000484873 ABCA10Q8WWZ4 1543 aa7.28□□□□□ -1.24
CAPN8-210ENST00000484873 KIAA0586Q9BVV6 1533 aa7.28□□□□□ -1.24
CAPN8-210ENST00000484873 DMRT2Q9Y5R5 561 aa7.28□□□□□ -1.24
CAPN8-210ENST00000484873 ADAMTSL3P82987 1691 aa7.28□□□□□ -1.24
CAPN8-210ENST00000484873 KIF21BO75037 1637 aa7.27□□□□□ -1.25
CAPN8-210ENST00000484873 MAP3K4Q9Y6R4 1608 aa7.27□□□□□ -1.25
CAPN8-210ENST00000484873 ABCC2Q92887 1545 aa7.27□□□□□ -1.25
CAPN8-210ENST00000484873 IQSEC2Q5JU85 1478 aa7.25□□□□□ -1.25
CAPN8-210ENST00000484873 EPRSP07814 1512 aaKnown RBP7.25□□□□□ -1.25
CAPN8-210ENST00000484873 CUX1P39880 1505 aa7.25□□□□□ -1.25
CAPN8-210ENST00000484873 MED1Q15648 1581 aaPredicted RBP7.22□□□□□ -1.25
CAPN8-210ENST00000484873 PTPRGP23470 1445 aa7.22□□□□□ -1.25
CAPN8-210ENST00000484873 YEATS2Q9ULM3 1422 aa7.22□□□□□ -1.25
CAPN8-210ENST00000484873 RUSC2Q8N2Y8 1516 aa7.22□□□□□ -1.25
CAPN8-210ENST00000484873 MADDQ8WXG6 1647 aa7.2□□□□□ -1.26
CAPN8-210ENST00000484873 ARID4BQ4LE39 1312 aaPredicted RBP7.2□□□□□ -1.26
CAPN8-210ENST00000484873 MAGI3Q5TCQ9 1506 aa7.19□□□□□ -1.26
CAPN8-210ENST00000484873 BCORL1Q5H9F3 1711 aa7.18□□□□□ -1.26
CAPN8-210ENST00000484873 UHRF1BP1LA0JNW5 1464 aa7.17□□□□□ -1.26
CAPN8-210ENST00000484873 ERICH3Q5RHP9 1530 aa7.17□□□□□ -1.26
CAPN8-210ENST00000484873 UBAP1LF5GYI3 381 aa7.17□□□□□ -1.26
CAPN8-210ENST00000484873 CD109Q6YHK3 1445 aa7.17□□□□□ -1.26
CAPN8-210ENST00000484873 PLPPR3Q6T4P5 718 aa7.16□□□□□ -1.26
CAPN8-210ENST00000484873 TTBK1Q5TCY1 1321 aaPredicted RBP7.16□□□□□ -1.26
CAPN8-210ENST00000484873 PTPRTO14522 1441 aa7.16□□□□□ -1.26
CAPN8-210ENST00000484873 ARAP3Q8WWN8 1544 aa7.16□□□□□ -1.26
CAPN8-210ENST00000484873 CUL7Q14999 1698 aa7.16□□□□□ -1.26
CAPN8-210ENST00000484873 TNIKQ9UKE5 1360 aa7.15□□□□□ -1.26
CAPN8-210ENST00000484873 LTBP4Q8N2S1 1624 aa7.15□□□□□ -1.27
CAPN8-210ENST00000484873 RIMS1Q86UR5 1692 aaKnown RBP7.15□□□□□ -1.27
CAPN8-210ENST00000484873 WRNQ14191 1432 aaPredicted RBP eCLIP7.14□□□□□ -1.27
CAPN8-210ENST00000484873 UACAQ9BZF9 1416 aa7.14□□□□□ -1.27
CAPN8-210ENST00000484873 KDM5BQ9UGL1 1544 aa7.14□□□□□ -1.27
CAPN8-210ENST00000484873 CFAP43Q8NDM7 1665 aa7.13□□□□□ -1.27
CAPN8-210ENST00000484873 WDR7Q9Y4E6 1490 aa7.13□□□□□ -1.27
CAPN8-210ENST00000484873 CARMIL2Q6F5E8 1435 aa7.12□□□□□ -1.27
CAPN8-210ENST00000484873 HSPA1LP34931 641 aa7.12□□□□□ -1.27
CAPN8-210ENST00000484873 POGZQ7Z3K3 1410 aa7.11□□□□□ -1.27
CAPN8-210ENST00000484873 PHLDB1Q86UU1 1377 aa7.11□□□□□ -1.27
CAPN8-210ENST00000484873 STRCQ7RTU9 1775 aa7.1□□□□□ -1.27
CAPN8-210ENST00000484873 SCAF1Q9H7N4 1312 aaKnown RBP7.08□□□□□ -1.28
CAPN8-210ENST00000484873 PREX1Q8TCU6 1659 aa7.08□□□□□ -1.28
CAPN8-210ENST00000484873 RAPGEF3O95398 923 aa7.07□□□□□ -1.28
CAPN8-210ENST00000484873 ZCCHC11Q5TAX3 1644 aaKnown RBP7.07□□□□□ -1.28
CAPN8-210ENST00000484873 UHRF1BP1Q6BDS2 1440 aa7.07□□□□□ -1.28
CAPN8-210ENST00000484873 FANCAO15360 1455 aa7.06□□□□□ -1.28
CAPN8-210ENST00000484873 KCNH8Q96L42 1107 aa7.06□□□□□ -1.28
CAPN8-210ENST00000484873 TTC37Q6PGP7 1564 aa7.06□□□□□ -1.28
CAPN8-210ENST00000484873 PIP4K2BP78356 416 aa7.05□□□□□ -1.28
CAPN8-210ENST00000484873 TOM1O60784 492 aa7.04□□□□□ -1.28
CAPN8-210ENST00000484873 ARHGEF40Q8TER5 1519 aa7.03□□□□□ -1.28
CAPN8-210ENST00000484873 RGS17Q9UGC6 210 aaPredicted RBP7.03□□□□□ -1.28
CAPN8-210ENST00000484873 ZNF335Q9H4Z2 1342 aaPredicted RBP7.01□□□□□ -1.29
CAPN8-210ENST00000484873 AKNAQ7Z591 1439 aa7.01□□□□□ -1.29
CAPN8-210ENST00000484873 NEO1Q92859 1461 aa7.01□□□□□ -1.29
CAPN8-210ENST00000484873 MLECQ14165 292 aa7.01□□□□□ -1.29
CAPN8-210ENST00000484873 NCOA1Q15788 1441 aa7.01□□□□□ -1.29
CAPN8-210ENST00000484873 CEBPAP49715 358 aaPredicted RBP7□□□□□ -1.29
CAPN8-210ENST00000484873 FRMPD1Q5SYB0 1578 aa6.99□□□□□ -1.29
CAPN8-210ENST00000484873 FER1L4A9Z1Z3 1794 aa6.99□□□□□ -1.29
CAPN8-210ENST00000484873 IFFO2Q5TF58 517 aa6.97□□□□□ -1.29
CAPN8-210ENST00000484873 POTEAQ6S8J7 498 aa6.97□□□□□ -1.29
CAPN8-210ENST00000484873 DISP1Q96F81 1524 aa6.96□□□□□ -1.29
CAPN8-210ENST00000484873 UPF1Q92900 1129 aaKnown RBP eCLIP6.96□□□□□ -1.3
CAPN8-210ENST00000484873 KIAA0556O60303 1618 aa6.96□□□□□ -1.3
CAPN8-210ENST00000484873 ARHGEF12Q9NZN5 1544 aa6.96□□□□□ -1.3
CAPN8-210ENST00000484873 DENND4BO75064 1496 aaPredicted RBP6.95□□□□□ -1.3
CAPN8-210ENST00000484873 EFCAB5A4FU69 1503 aa6.95□□□□□ -1.3
CAPN8-210ENST00000484873 IQGAP2Q13576 1575 aa6.95□□□□□ -1.3
CAPN8-210ENST00000484873 PTPRKQ15262 1439 aa6.94□□□□□ -1.3
CAPN8-210ENST00000484873 FHOD3Q2V2M9 1422 aa6.94□□□□□ -1.3
CAPN8-210ENST00000484873 ZFYVE16Q7Z3T8 1539 aa6.94□□□□□ -1.3
CAPN8-210ENST00000484873 BIVM-ERCC5R4GMW8 1640 aa6.94□□□□□ -1.3
CAPN8-210ENST00000484873 MAGI2Q86UL8 1455 aa6.93□□□□□ -1.3
CAPN8-210ENST00000484873 PKD2Q13563 968 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms