RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-210ENST00000484752 CTTNBP2Q8WZ74 1663 aa18.57■□□□□ 0.56
RFTN1-210ENST00000484752 CHD1O14646 1710 aa18.56■□□□□ 0.56
RFTN1-210ENST00000484752 NUP160Q12769 1436 aa18.55■□□□□ 0.56
RFTN1-210ENST00000484752 KIAA0586Q9BVV6 1533 aa18.54■□□□□ 0.56
RFTN1-210ENST00000484752 IQGAP2Q13576 1575 aa18.51■□□□□ 0.55
RFTN1-210ENST00000484752 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
RFTN1-210ENST00000484752 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
RFTN1-210ENST00000484752 CLIP1P30622 1438 aa18.49■□□□□ 0.55
RFTN1-210ENST00000484752 EFCAB5A4FU69 1503 aa18.45■□□□□ 0.54
RFTN1-210ENST00000484752 RANGAP1P46060 587 aaPredicted RBP18.45■□□□□ 0.54
RFTN1-210ENST00000484752 OSCARQ8IYS5 282 aa18.45■□□□□ 0.54
RFTN1-210ENST00000484752 UGGT2Q9NYU1 1516 aa18.41■□□□□ 0.54
RFTN1-210ENST00000484752 CARMIL2Q6F5E8 1435 aa18.4■□□□□ 0.54
RFTN1-210ENST00000484752 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.54
RFTN1-210ENST00000484752 JPH4Q96JJ6 628 aa18.38■□□□□ 0.53
RFTN1-210ENST00000484752 SAMD9Q5K651 1589 aa18.35■□□□□ 0.53
RFTN1-210ENST00000484752 ARHGAP35Q9NRY4 1499 aa18.35■□□□□ 0.53
RFTN1-210ENST00000484752 SHROOM2Q13796 1616 aa18.32■□□□□ 0.52
RFTN1-210ENST00000484752 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
RFTN1-210ENST00000484752 KIAA0556O60303 1618 aa18.31■□□□□ 0.52
RFTN1-210ENST00000484752 FMN1Q68DA7 1419 aa18.3■□□□□ 0.52
RFTN1-210ENST00000484752 DISP1Q96F81 1524 aa18.28■□□□□ 0.52
RFTN1-210ENST00000484752 P3H3Q8IVL6 736 aa18.28■□□□□ 0.52
RFTN1-210ENST00000484752 FHOD3Q2V2M9 1422 aa18.28■□□□□ 0.52
RFTN1-210ENST00000484752 ARAP1Q96P48 1450 aa18.27■□□□□ 0.52
RFTN1-210ENST00000484752 VPS8Q8N3P4 1428 aa18.27■□□□□ 0.52
RFTN1-210ENST00000484752 PTPRGP23470 1445 aa18.19■□□□□ 0.5
RFTN1-210ENST00000484752 APLP2Q06481 763 aa18.19■□□□□ 0.5
RFTN1-210ENST00000484752 FYCO1Q9BQS8 1478 aa18.16■□□□□ 0.5
RFTN1-210ENST00000484752 TTBK1Q5TCY1 1321 aaPredicted RBP18.16■□□□□ 0.5
RFTN1-210ENST00000484752 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
RFTN1-210ENST00000484752 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
RFTN1-210ENST00000484752 ATP1B4Q9UN42 357 aaPredicted RBP18.12■□□□□ 0.49
RFTN1-210ENST00000484752 PCF11O94913 1555 aaKnown RBP18.12■□□□□ 0.49
RFTN1-210ENST00000484752 HECW1Q76N89 1606 aa18.12■□□□□ 0.49
RFTN1-210ENST00000484752 ARHGEF11O15085 1522 aa18.1■□□□□ 0.49
RFTN1-210ENST00000484752 RAPGEF6Q8TEU7 1601 aa18.09■□□□□ 0.49
RFTN1-210ENST00000484752 CCDC18Q5T9S5 1454 aa18.08■□□□□ 0.49
RFTN1-210ENST00000484752 UACAQ9BZF9 1416 aa18.07■□□□□ 0.48
RFTN1-210ENST00000484752 PLB1Q6P1J6 1458 aa18.06■□□□□ 0.48
RFTN1-210ENST00000484752 ABCA8O94911 1581 aa18.05■□□□□ 0.48
RFTN1-210ENST00000484752 MAP3K1Q13233 1512 aa18.03■□□□□ 0.48
RFTN1-210ENST00000484752 ABCC2Q92887 1545 aa18.03■□□□□ 0.48
RFTN1-210ENST00000484752 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
RFTN1-210ENST00000484752 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
RFTN1-210ENST00000484752 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
RFTN1-210ENST00000484752 UHRF1BP1LA0JNW5 1464 aa18.01■□□□□ 0.47
RFTN1-210ENST00000484752 NUP153P49790 1475 aaKnown RBP18.01■□□□□ 0.47
RFTN1-210ENST00000484752 EPRSP07814 1512 aaKnown RBP18■□□□□ 0.47
RFTN1-210ENST00000484752 CDK11AQ9UQ88 783 aaPredicted RBP18■□□□□ 0.47
RFTN1-210ENST00000484752 TIAM1Q13009 1591 aa18■□□□□ 0.47
RFTN1-210ENST00000484752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
RFTN1-210ENST00000484752 HNRNPUL2Q1KMD3 747 aaKnown RBP17.99■□□□□ 0.47
RFTN1-210ENST00000484752 CFAP43Q8NDM7 1665 aa17.98■□□□□ 0.47
RFTN1-210ENST00000484752 NPM1P06748 294 aaKnown RBP eCLIP17.95■□□□□ 0.46
RFTN1-210ENST00000484752 MTUS2Q5JR59 1369 aa17.93■□□□□ 0.46
RFTN1-210ENST00000484752 ARID3CA6NKF2 412 aa17.93■□□□□ 0.46
RFTN1-210ENST00000484752 CDK13Q14004 1512 aaKnown RBP17.93■□□□□ 0.46
RFTN1-210ENST00000484752 LRRC9Q6ZRR7 1453 aa17.91■□□□□ 0.46
RFTN1-210ENST00000484752 CYB5RLQ6IPT4 315 aa17.91■□□□□ 0.46
RFTN1-210ENST00000484752 EHBP1L1Q8N3D4 1523 aa17.91■□□□□ 0.46
RFTN1-210ENST00000484752 KDM5BQ9UGL1 1544 aa17.91■□□□□ 0.46
RFTN1-210ENST00000484752 ADCY10Q96PN6 1610 aa17.9■□□□□ 0.46
RFTN1-210ENST00000484752 ATP10BO94823 1461 aa17.9■□□□□ 0.46
RFTN1-210ENST00000484752 PLEKHD1A6NEE1 506 aa17.9■□□□□ 0.46
RFTN1-210ENST00000484752 LRRIQ1Q96JM4 1722 aa17.89■□□□□ 0.45
RFTN1-210ENST00000484752 ZCCHC11Q5TAX3 1644 aaKnown RBP17.86■□□□□ 0.45
RFTN1-210ENST00000484752 TROQ12816 1431 aaPredicted RBP17.85■□□□□ 0.45
RFTN1-210ENST00000484752 KANK4Q5T7N3 995 aaPredicted RBP17.85■□□□□ 0.45
RFTN1-210ENST00000484752 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
RFTN1-210ENST00000484752 SUPT6HQ7KZ85 1726 aaKnown RBP17.82■□□□□ 0.44
RFTN1-210ENST00000484752 KIF14Q15058 1648 aa17.8■□□□□ 0.44
RFTN1-210ENST00000484752 MAGI3Q5TCQ9 1506 aa17.78■□□□□ 0.44
RFTN1-210ENST00000484752 WDR7Q9Y4E6 1490 aa17.78■□□□□ 0.44
RFTN1-210ENST00000484752 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
RFTN1-210ENST00000484752 ASXL2Q76L83 1435 aa17.76■□□□□ 0.43
RFTN1-210ENST00000484752 MAPKBP1O60336 1514 aa17.76■□□□□ 0.43
RFTN1-210ENST00000484752 CCNB3Q8WWL7 1395 aa17.73■□□□□ 0.43
RFTN1-210ENST00000484752 KCNH8Q96L42 1107 aa17.7■□□□□ 0.42
RFTN1-210ENST00000484752 MYOM3Q5VTT5 1437 aa17.69■□□□□ 0.42
RFTN1-210ENST00000484752 TRIM26Q12899 539 aaPredicted RBP17.68■□□□□ 0.42
RFTN1-210ENST00000484752 ITSN2Q9NZM3 1697 aa17.67■□□□□ 0.42
RFTN1-210ENST00000484752 PHLDB1Q86UU1 1377 aa17.67■□□□□ 0.42
RFTN1-210ENST00000484752 ABCC10Q5T3U5 1492 aa17.66■□□□□ 0.42
RFTN1-210ENST00000484752 MIA2Q96PC5 1412 aa17.65■□□□□ 0.42
RFTN1-210ENST00000484752 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.64■□□□□ 0.41
RFTN1-210ENST00000484752 FGD6Q6ZV73 1430 aa17.64■□□□□ 0.41
RFTN1-210ENST00000484752 RRBP1Q9P2E9 1410 aaKnown RBP17.64■□□□□ 0.41
RFTN1-210ENST00000484752 CFDP1Q9UEE9 299 aaPredicted RBP17.63■□□□□ 0.41
RFTN1-210ENST00000484752 GPATCH8Q9UKJ3 1502 aaKnown RBP17.62■□□□□ 0.41
RFTN1-210ENST00000484752 TTC37Q6PGP7 1564 aa17.62■□□□□ 0.41
RFTN1-210ENST00000484752 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
RFTN1-210ENST00000484752 MYO5CQ9NQX4 1742 aa17.6■□□□□ 0.41
RFTN1-210ENST00000484752 PREX2Q70Z35 1606 aa17.59■□□□□ 0.41
RFTN1-210ENST00000484752 ARAP3Q8WWN8 1544 aa17.59■□□□□ 0.41
RFTN1-210ENST00000484752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.59■□□□□ 0.41
RFTN1-210ENST00000484752 GLI2P10070 1586 aa17.58■□□□□ 0.41
RFTN1-210ENST00000484752 ARHGAP5Q13017 1502 aa17.58■□□□□ 0.41
RFTN1-210ENST00000484752 PLCH2O75038 1416 aa17.58■□□□□ 0.41
RFTN1-210ENST00000484752 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms