RNA–Protein interactions for RNA: ENST00000484062.1

TMEM41A-207, Transcript of transmembrane protein 41A, humanhuman

TSL 3

Gene TMEM41A, Length 743 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-207ENST00000484062 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
TMEM41A-207ENST00000484062 FARP1Q9Y4F1 1045 aaPredicted RBP17.52■□□□□ 0.4
TMEM41A-207ENST00000484062 WIZO95785 1651 aa17.5■□□□□ 0.39
TMEM41A-207ENST00000484062 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
TMEM41A-207ENST00000484062 CD44P16070 742 aaKnown RBP17.47■□□□□ 0.39
TMEM41A-207ENST00000484062 TOP2AP11388 1531 aaKnown RBP17.38■□□□□ 0.37
TMEM41A-207ENST00000484062 LHX8Q68G74 356 aa17.32■□□□□ 0.36
TMEM41A-207ENST00000484062 STAG3Q9UJ98 1225 aa17.31■□□□□ 0.36
TMEM41A-207ENST00000484062 SPDYE4A6NLX3 237 aa17.29■□□□□ 0.36
TMEM41A-207ENST00000484062 CREBZFQ9NS37 354 aa17.28■□□□□ 0.36
TMEM41A-207ENST00000484062 POTEIP0CG38 1075 aa17.25■□□□□ 0.35
TMEM41A-207ENST00000484062 CLCN6P51797 869 aa17.24■□□□□ 0.35
TMEM41A-207ENST00000484062 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
TMEM41A-207ENST00000484062 ZRANB1Q9UGI0 708 aa17.19■□□□□ 0.34
TMEM41A-207ENST00000484062 NESP48681 1621 aa17.18■□□□□ 0.34
TMEM41A-207ENST00000484062 ZNF579Q8NAF0 562 aaKnown RBP17.17■□□□□ 0.34
TMEM41A-207ENST00000484062 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
TMEM41A-207ENST00000484062 DCBLD2Q96PD2 775 aa17.13■□□□□ 0.33
TMEM41A-207ENST00000484062 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
TMEM41A-207ENST00000484062 CFTRP13569 1480 aa17.1■□□□□ 0.33
TMEM41A-207ENST00000484062 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
TMEM41A-207ENST00000484062 PDS5BQ9NTI5 1447 aa17.07■□□□□ 0.32
TMEM41A-207ENST00000484062 SUPT5HO00267 1087 aaKnown RBP17.06■□□□□ 0.32
TMEM41A-207ENST00000484062 GALR2O43603 387 aaPredicted RBP17■□□□□ 0.31
TMEM41A-207ENST00000484062 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
TMEM41A-207ENST00000484062 KIF21AQ7Z4S6 1674 aa16.98■□□□□ 0.31
TMEM41A-207ENST00000484062 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
TMEM41A-207ENST00000484062 NPM1P06748 294 aaKnown RBP eCLIP16.96■□□□□ 0.31
TMEM41A-207ENST00000484062 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
TMEM41A-207ENST00000484062 THOC2Q8NI27 1593 aaKnown RBP16.95■□□□□ 0.3
TMEM41A-207ENST00000484062 MNX1P50219 401 aaPredicted RBP16.94■□□□□ 0.3
TMEM41A-207ENST00000484062 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
TMEM41A-207ENST00000484062 PHF12Q96QT6 1004 aa16.93■□□□□ 0.3
TMEM41A-207ENST00000484062 CUX2O14529 1486 aa16.93■□□□□ 0.3
TMEM41A-207ENST00000484062 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
TMEM41A-207ENST00000484062 WDR62O43379 1518 aa16.86■□□□□ 0.29
TMEM41A-207ENST00000484062 PROM2Q8N271 834 aa16.8■□□□□ 0.28
TMEM41A-207ENST00000484062 URB2Q14146 1524 aaKnown RBP16.78■□□□□ 0.28
TMEM41A-207ENST00000484062 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
TMEM41A-207ENST00000484062 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
TMEM41A-207ENST00000484062 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
TMEM41A-207ENST00000484062 POTEB2H3BUK9 544 aa16.69■□□□□ 0.26
TMEM41A-207ENST00000484062 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
TMEM41A-207ENST00000484062 MS4A3Q96HJ5 214 aa16.69■□□□□ 0.26
TMEM41A-207ENST00000484062 OTUD5Q96G74 571 aa16.67■□□□□ 0.26
TMEM41A-207ENST00000484062 TSPYL2Q9H2G4 693 aaPredicted RBP16.67■□□□□ 0.26
TMEM41A-207ENST00000484062 CUX1P39880 1505 aa16.61■□□□□ 0.25
TMEM41A-207ENST00000484062 ASTLQ6HA08 431 aaPredicted RBP16.61■□□□□ 0.25
TMEM41A-207ENST00000484062 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
TMEM41A-207ENST00000484062 ATMINO43313 823 aaPredicted RBP16.58■□□□□ 0.24
TMEM41A-207ENST00000484062 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.24
TMEM41A-207ENST00000484062 POLA1P09884 1462 aaPredicted RBP16.57■□□□□ 0.24
TMEM41A-207ENST00000484062 METRNQ9UJH8 293 aa16.56■□□□□ 0.24
TMEM41A-207ENST00000484062 MIER1Q8N108 512 aa16.55■□□□□ 0.24
TMEM41A-207ENST00000484062 WRNQ14191 1432 aaPredicted RBP eCLIP16.54■□□□□ 0.24
TMEM41A-207ENST00000484062 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
TMEM41A-207ENST00000484062 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
TMEM41A-207ENST00000484062 SLC39A7Q92504 469 aa16.52■□□□□ 0.24
TMEM41A-207ENST00000484062 TOP2BQ02880 1626 aa16.52■□□□□ 0.23
TMEM41A-207ENST00000484062 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
TMEM41A-207ENST00000484062 BIVM-ERCC5R4GMW8 1640 aa16.52■□□□□ 0.23
TMEM41A-207ENST00000484062 C7P10643 843 aa16.51■□□□□ 0.23
TMEM41A-207ENST00000484062 KIF12Q96FN5 646 aa16.5■□□□□ 0.23
TMEM41A-207ENST00000484062 SYNJ1O43426 1573 aa16.5■□□□□ 0.23
TMEM41A-207ENST00000484062 SOGA1O94964 1423 aa16.47■□□□□ 0.23
TMEM41A-207ENST00000484062 ZNF608Q9ULD9 1512 aaPredicted RBP16.46■□□□□ 0.23
TMEM41A-207ENST00000484062 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
TMEM41A-207ENST00000484062 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
TMEM41A-207ENST00000484062 EIF4G3O43432 1585 aaKnown RBP16.44■□□□□ 0.22
TMEM41A-207ENST00000484062 ATN1P54259 1190 aaPredicted RBP16.44■□□□□ 0.22
TMEM41A-207ENST00000484062 RASEFQ8IZ41 740 aa16.44■□□□□ 0.22
TMEM41A-207ENST00000484062 PLSCR2Q9NRY7 297 aa16.43■□□□□ 0.22
TMEM41A-207ENST00000484062 ABCA10Q8WWZ4 1543 aa16.41■□□□□ 0.22
TMEM41A-207ENST00000484062 POTEJP0CG39 1038 aa16.41■□□□□ 0.22
TMEM41A-207ENST00000484062 MAP3K13O43283 966 aa16.4■□□□□ 0.22
TMEM41A-207ENST00000484062 PLCD3Q8N3E9 789 aa16.39■□□□□ 0.21
TMEM41A-207ENST00000484062 TRPC6Q9Y210 931 aa16.38■□□□□ 0.21
TMEM41A-207ENST00000484062 BMP2KQ9NSY1 1161 aaPredicted RBP16.37■□□□□ 0.21
TMEM41A-207ENST00000484062 AQRO60306 1485 aaKnown RBP eCLIP16.36■□□□□ 0.21
TMEM41A-207ENST00000484062 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
TMEM41A-207ENST00000484062 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
TMEM41A-207ENST00000484062 MAMSTRQ6ZN01 415 aa16.34■□□□□ 0.21
TMEM41A-207ENST00000484062 POTEMA6NI47 508 aa16.32■□□□□ 0.2
TMEM41A-207ENST00000484062 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
TMEM41A-207ENST00000484062 GAPVD1Q14C86 1478 aa16.3■□□□□ 0.2
TMEM41A-207ENST00000484062 TIE1P35590 1138 aa16.3■□□□□ 0.2
TMEM41A-207ENST00000484062 POTEGQ6S5H5 508 aa16.28■□□□□ 0.2
TMEM41A-207ENST00000484062 MAGI1Q96QZ7 1491 aaPredicted RBP16.27■□□□□ 0.19
TMEM41A-207ENST00000484062 PBRM1Q86U86 1689 aa16.27■□□□□ 0.19
TMEM41A-207ENST00000484062 POTEFA5A3E0 1075 aa16.26■□□□□ 0.19
TMEM41A-207ENST00000484062 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
TMEM41A-207ENST00000484062 SCUBE2Q9NQ36 999 aa16.25■□□□□ 0.19
TMEM41A-207ENST00000484062 ZBTB47Q9UFB7 747 aaPredicted RBP16.25■□□□□ 0.19
TMEM41A-207ENST00000484062 TTLL13PA6NNM8 815 aa16.22■□□□□ 0.19
TMEM41A-207ENST00000484062 NUBP1P53384 320 aa16.22■□□□□ 0.19
TMEM41A-207ENST00000484062 ERICH3Q5RHP9 1530 aa16.22■□□□□ 0.19
TMEM41A-207ENST00000484062 DNAJC5Q9H3Z4 198 aa16.21■□□□□ 0.19
TMEM41A-207ENST00000484062 PCDHB13Q9Y5F0 798 aa16.2■□□□□ 0.18
TMEM41A-207ENST00000484062 KIF27Q86VH2 1401 aa16.19■□□□□ 0.18
TMEM41A-207ENST00000484062 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms