RNA–Protein interactions for RNA: ENST00000484062.1

TMEM41A-207, Transcript of transmembrane protein 41A, humanhuman

TSL 3

Gene TMEM41A, Length 743 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-207ENST00000484062 AEBP2Q6ZN18 517 aaPredicted RBP34.13■■■■□ 3.05
TMEM41A-207ENST00000484062 CHIC1Q5VXU3 224 aa32.17■■■□□ 2.74
TMEM41A-207ENST00000484062 SENP3Q9H4L4 574 aaPredicted RBP29.15■■■□□ 2.26
TMEM41A-207ENST00000484062 PHF23Q9BUL5 403 aaPredicted RBP28.75■■■□□ 2.19
TMEM41A-207ENST00000484062 FOXD1Q16676 465 aa27.21■■□□□ 1.95
TMEM41A-207ENST00000484062 PLPPR3Q6T4P5 718 aa25.6■■□□□ 1.69
TMEM41A-207ENST00000484062 MSH5O43196 834 aa25.54■■□□□ 1.68
TMEM41A-207ENST00000484062 PIAS4Q8N2W9 510 aaPredicted RBP25.38■■□□□ 1.65
TMEM41A-207ENST00000484062 POTEDQ86YR6 584 aa25.35■■□□□ 1.65
TMEM41A-207ENST00000484062 PPP6R1Q9UPN7 881 aa25.27■■□□□ 1.64
TMEM41A-207ENST00000484062 ADRA2BP18089 450 aa25.18■■□□□ 1.62
TMEM41A-207ENST00000484062 MAPK8IP2Q13387 824 aaPredicted RBP23.21■■□□□ 1.31
TMEM41A-207ENST00000484062 DMRT2Q9Y5R5 561 aa23.07■■□□□ 1.28
TMEM41A-207ENST00000484062 SCAF1Q9H7N4 1312 aaKnown RBP23.03■■□□□ 1.28
TMEM41A-207ENST00000484062 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
TMEM41A-207ENST00000484062 PPP4R3CPQ6ZMV5 832 aa22.42■■□□□ 1.18
TMEM41A-207ENST00000484062 DCAF8L1A6NGE4 600 aa22.2■■□□□ 1.14
TMEM41A-207ENST00000484062 HOXD11P31277 338 aaPredicted RBP22.12■■□□□ 1.13
TMEM41A-207ENST00000484062 CACNB1Q02641 598 aaPredicted RBP22.09■■□□□ 1.13
TMEM41A-207ENST00000484062 CNKSR2Q8WXI2 1034 aa22.05■■□□□ 1.12
TMEM41A-207ENST00000484062 RNF216Q9NWF9 866 aaPredicted RBP21.9■■□□□ 1.1
TMEM41A-207ENST00000484062 RNF39Q9H2S5 420 aa21.77■■□□□ 1.08
TMEM41A-207ENST00000484062 NCBP3Q53F19 620 aaKnown RBP21.49■■□□□ 1.03
TMEM41A-207ENST00000484062 C1QBPQ07021 282 aaKnown RBP21.44■■□□□ 1.02
TMEM41A-207ENST00000484062 DNAJC5BQ9UF47 199 aa21.38■■□□□ 1.01
TMEM41A-207ENST00000484062 NPM3O75607 178 aaKnown RBP21.17■□□□□ 0.98
TMEM41A-207ENST00000484062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.12■□□□□ 0.97
TMEM41A-207ENST00000484062 U3KPZ7 1027 aaPredicted RBP20.63■□□□□ 0.89
TMEM41A-207ENST00000484062 KCNA4P22459 653 aa20.57■□□□□ 0.88
TMEM41A-207ENST00000484062 CCDC180Q9P1Z9 1646 aa20.45■□□□□ 0.86
TMEM41A-207ENST00000484062 SPINK5Q9NQ38 1064 aaPredicted RBP20.42■□□□□ 0.86
TMEM41A-207ENST00000484062 CAPN15O75808 1086 aa20.41■□□□□ 0.86
TMEM41A-207ENST00000484062 DSG3P32926 999 aa20.32■□□□□ 0.84
TMEM41A-207ENST00000484062 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
TMEM41A-207ENST00000484062 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
TMEM41A-207ENST00000484062 APLP2Q06481 763 aa20.02■□□□□ 0.8
TMEM41A-207ENST00000484062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.95■□□□□ 0.78
TMEM41A-207ENST00000484062 HNRNPUL2Q1KMD3 747 aaKnown RBP19.95■□□□□ 0.78
TMEM41A-207ENST00000484062 ZNF219Q9P2Y4 722 aaPredicted RBP19.95■□□□□ 0.78
TMEM41A-207ENST00000484062 ABCB7O75027 752 aa19.92■□□□□ 0.78
TMEM41A-207ENST00000484062 SAMD1Q6SPF0 538 aaPredicted RBP19.83■□□□□ 0.77
TMEM41A-207ENST00000484062 POTEHQ6S545 545 aa19.82■□□□□ 0.76
TMEM41A-207ENST00000484062 ABCC9O60706 1549 aa19.81■□□□□ 0.76
TMEM41A-207ENST00000484062 MYCNP04198 464 aaPredicted RBP19.58■□□□□ 0.72
TMEM41A-207ENST00000484062 POLA2Q14181 598 aa19.43■□□□□ 0.7
TMEM41A-207ENST00000484062 RBM42Q9BTD8 480 aaKnown RBP19.38■□□□□ 0.69
TMEM41A-207ENST00000484062 SLC4A1APQ9BWU0 796 aaKnown RBP19.37■□□□□ 0.69
TMEM41A-207ENST00000484062 FOXD4L1Q9NU39 408 aa19.26■□□□□ 0.67
TMEM41A-207ENST00000484062 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
TMEM41A-207ENST00000484062 NACADO15069 1562 aa19.19■□□□□ 0.66
TMEM41A-207ENST00000484062 ATF5Q9Y2D1 282 aaPredicted RBP19.17■□□□□ 0.66
TMEM41A-207ENST00000484062 RB1CC1Q8TDY2 1594 aa19.16■□□□□ 0.66
TMEM41A-207ENST00000484062 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
TMEM41A-207ENST00000484062 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
TMEM41A-207ENST00000484062 CHRDL2Q6WN34 429 aa19.07■□□□□ 0.64
TMEM41A-207ENST00000484062 DCAF8L2P0C7V8 631 aa19.01■□□□□ 0.63
TMEM41A-207ENST00000484062 ZBTB12Q9Y330 459 aaPredicted RBP18.98■□□□□ 0.63
TMEM41A-207ENST00000484062 ZBTB22O15209 634 aa18.9■□□□□ 0.62
TMEM41A-207ENST00000484062 AKT1S1Q96B36 256 aa18.89■□□□□ 0.61
TMEM41A-207ENST00000484062 OSCARQ8IYS5 282 aa18.81■□□□□ 0.6
TMEM41A-207ENST00000484062 REM2Q8IYK8 340 aaPredicted RBP18.73■□□□□ 0.59
TMEM41A-207ENST00000484062 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
TMEM41A-207ENST00000484062 ATXN8OSP0DMR3 200 aa18.67■□□□□ 0.58
TMEM41A-207ENST00000484062 SCRIBQ14160 1630 aa18.59■□□□□ 0.57
TMEM41A-207ENST00000484062 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
TMEM41A-207ENST00000484062 PIP4P2Q8N4L2 257 aa18.57■□□□□ 0.56
TMEM41A-207ENST00000484062 PITPNM1O00562 1244 aa18.53■□□□□ 0.56
TMEM41A-207ENST00000484062 SHROOM4Q9ULL8 1493 aa18.48■□□□□ 0.55
TMEM41A-207ENST00000484062 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
TMEM41A-207ENST00000484062 SP7Q8TDD2 431 aaPredicted RBP18.46■□□□□ 0.55
TMEM41A-207ENST00000484062 FBLN2P98095 1184 aa18.44■□□□□ 0.54
TMEM41A-207ENST00000484062 FXR2P51116 673 aaKnown RBP eCLIP18.4■□□□□ 0.54
TMEM41A-207ENST00000484062 SPDYE2BA6NHP3 402 aa18.38■□□□□ 0.53
TMEM41A-207ENST00000484062 SPDYE6P0CI01 402 aa18.38■□□□□ 0.53
TMEM41A-207ENST00000484062 SPDYE2Q495Y8 402 aa18.38■□□□□ 0.53
TMEM41A-207ENST00000484062 HAX1O00165 279 aa18.32■□□□□ 0.52
TMEM41A-207ENST00000484062 MKRN4PQ13434 485 aaPredicted RBP18.26■□□□□ 0.51
TMEM41A-207ENST00000484062 ZNF692Q9BU19 519 aaPredicted RBP18.15■□□□□ 0.5
TMEM41A-207ENST00000484062 CLEC11AQ9Y240 323 aa18.15■□□□□ 0.5
TMEM41A-207ENST00000484062 SPDYE1Q8NFV5 336 aaPredicted RBP18.13■□□□□ 0.49
TMEM41A-207ENST00000484062 SSUH2Q9Y2M2 353 aa18.1■□□□□ 0.49
TMEM41A-207ENST00000484062 EIF4G1Q04637 1599 aaKnown RBP18.07■□□□□ 0.48
TMEM41A-207ENST00000484062 PRKAR2AP13861 404 aaKnown RBP18.06■□□□□ 0.48
TMEM41A-207ENST00000484062 EVX2Q03828 476 aa18.06■□□□□ 0.48
TMEM41A-207ENST00000484062 CC2D2AQ9P2K1 1620 aa17.95■□□□□ 0.46
TMEM41A-207ENST00000484062 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
TMEM41A-207ENST00000484062 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.45
TMEM41A-207ENST00000484062 SMARCA4P51532 1647 aa17.83■□□□□ 0.44
TMEM41A-207ENST00000484062 C19orf67A6NJJ6 358 aa17.82■□□□□ 0.44
TMEM41A-207ENST00000484062 CHADLQ6NUI6 762 aa17.82■□□□□ 0.44
TMEM41A-207ENST00000484062 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
TMEM41A-207ENST00000484062 PRR29P0C7W0 189 aa17.8■□□□□ 0.44
TMEM41A-207ENST00000484062 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
TMEM41A-207ENST00000484062 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
TMEM41A-207ENST00000484062 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
TMEM41A-207ENST00000484062 PEG3Q9GZU2 1588 aa17.7■□□□□ 0.42
TMEM41A-207ENST00000484062 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
TMEM41A-207ENST00000484062 HMGXB3Q12766 1538 aa17.64■□□□□ 0.41
TMEM41A-207ENST00000484062 GABBR2O75899 941 aa17.64■□□□□ 0.41
TMEM41A-207ENST00000484062 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms