RNA–Protein interactions for RNA: ENST00000484024.5

RGPD6-210, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 2,179 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-210ENST00000484024 URB2Q14146 1524 aaKnown RBP7.48□□□□□ -1.21
RGPD6-210ENST00000484024 ARHGEF11O15085 1522 aa7.47□□□□□ -1.21
RGPD6-210ENST00000484024 TRHP20396 242 aaPredicted RBP7.47□□□□□ -1.21
RGPD6-210ENST00000484024 CYB5RLQ6IPT4 315 aa7.47□□□□□ -1.21
RGPD6-210ENST00000484024 IGF1RP08069 1367 aa7.46□□□□□ -1.21
RGPD6-210ENST00000484024 DIEXFQ68CQ4 756 aaKnown RBP7.46□□□□□ -1.21
RGPD6-210ENST00000484024 FGD5Q6ZNL6 1462 aa7.46□□□□□ -1.22
RGPD6-210ENST00000484024 SCAF1Q9H7N4 1312 aaKnown RBP7.46□□□□□ -1.22
RGPD6-210ENST00000484024 KANK4Q5T7N3 995 aaPredicted RBP7.45□□□□□ -1.22
RGPD6-210ENST00000484024 ZNF608Q9ULD9 1512 aaPredicted RBP7.44□□□□□ -1.22
RGPD6-210ENST00000484024 ARHGAP35Q9NRY4 1499 aa7.44□□□□□ -1.22
RGPD6-210ENST00000484024 CARMIL1Q5VZK9 1371 aa7.44□□□□□ -1.22
RGPD6-210ENST00000484024 ZNF316A6NFI3 1004 aaPredicted RBP7.43□□□□□ -1.22
RGPD6-210ENST00000484024 CHD1O14646 1710 aa7.41□□□□□ -1.22
RGPD6-210ENST00000484024 DNMBPQ6XZF7 1577 aa7.39□□□□□ -1.23
RGPD6-210ENST00000484024 RAD54L2Q9Y4B4 1467 aa7.39□□□□□ -1.23
RGPD6-210ENST00000484024 RRBP1Q9P2E9 1410 aaKnown RBP7.38□□□□□ -1.23
RGPD6-210ENST00000484024 IFT140Q96RY7 1462 aa7.38□□□□□ -1.23
RGPD6-210ENST00000484024 TOPBP1Q92547 1522 aa7.38□□□□□ -1.23
RGPD6-210ENST00000484024 MAPK8IP2Q13387 824 aaPredicted RBP7.38□□□□□ -1.23
RGPD6-210ENST00000484024 EIF4G3O43432 1585 aaKnown RBP7.38□□□□□ -1.23
RGPD6-210ENST00000484024 CCNB3Q8WWL7 1395 aa7.38□□□□□ -1.23
RGPD6-210ENST00000484024 FBLN2P98095 1184 aa7.37□□□□□ -1.23
RGPD6-210ENST00000484024 POLA1P09884 1462 aaPredicted RBP7.37□□□□□ -1.23
RGPD6-210ENST00000484024 ABCA10Q8WWZ4 1543 aa7.37□□□□□ -1.23
RGPD6-210ENST00000484024 DHX57Q6P158 1386 aaKnown RBP7.37□□□□□ -1.23
RGPD6-210ENST00000484024 ITGAEP38570 1179 aa7.36□□□□□ -1.23
RGPD6-210ENST00000484024 P3H3Q8IVL6 736 aa7.36□□□□□ -1.23
RGPD6-210ENST00000484024 CLSPNQ9HAW4 1339 aa7.36□□□□□ -1.23
RGPD6-210ENST00000484024 ACIN1Q9UKV3 1341 aaKnown RBP7.36□□□□□ -1.23
RGPD6-210ENST00000484024 KCNA4P22459 653 aa7.35□□□□□ -1.23
RGPD6-210ENST00000484024 TIAM1Q13009 1591 aa7.35□□□□□ -1.23
RGPD6-210ENST00000484024 FHAD1B1AJZ9 1412 aa7.35□□□□□ -1.23
RGPD6-210ENST00000484024 AQRO60306 1485 aaKnown RBP eCLIP7.35□□□□□ -1.23
RGPD6-210ENST00000484024 MAP3K1Q13233 1512 aa7.35□□□□□ -1.23
RGPD6-210ENST00000484024 CENPBP07199 599 aaPredicted RBP7.35□□□□□ -1.23
RGPD6-210ENST00000484024 ATP1B4Q9UN42 357 aaPredicted RBP7.35□□□□□ -1.23
RGPD6-210ENST00000484024 NEUROD1Q13562 356 aa7.34□□□□□ -1.23
RGPD6-210ENST00000484024 NCBP3Q53F19 620 aaKnown RBP7.34□□□□□ -1.23
RGPD6-210ENST00000484024 LRRC9Q6ZRR7 1453 aa7.33□□□□□ -1.24
RGPD6-210ENST00000484024 FHOD3Q2V2M9 1422 aa7.33□□□□□ -1.24
RGPD6-210ENST00000484024 CUL7Q14999 1698 aa7.32□□□□□ -1.24
RGPD6-210ENST00000484024 CNKSR2Q8WXI2 1034 aa7.32□□□□□ -1.24
RGPD6-210ENST00000484024 PCF11O94913 1555 aaKnown RBP7.31□□□□□ -1.24
RGPD6-210ENST00000484024 TARBP1Q13395 1621 aaKnown RBP7.31□□□□□ -1.24
RGPD6-210ENST00000484024 EFCAB5A4FU69 1503 aa7.31□□□□□ -1.24
RGPD6-210ENST00000484024 PHLDB1Q86UU1 1377 aa7.31□□□□□ -1.24
RGPD6-210ENST00000484024 TDRD9Q8NDG6 1382 aaKnown RBP7.31□□□□□ -1.24
RGPD6-210ENST00000484024 FAM50AQ14320 339 aaKnown RBP7.3□□□□□ -1.24
RGPD6-210ENST00000484024 MIER1Q8N108 512 aa7.3□□□□□ -1.24
RGPD6-210ENST00000484024 RAB3GAP2Q9H2M9 1393 aa7.29□□□□□ -1.24
RGPD6-210ENST00000484024 FYCO1Q9BQS8 1478 aa7.29□□□□□ -1.24
RGPD6-210ENST00000484024 CFAP43Q8NDM7 1665 aa7.29□□□□□ -1.24
RGPD6-210ENST00000484024 YTHDC1Q96MU7 727 aaKnown RBP7.29□□□□□ -1.24
RGPD6-210ENST00000484024 CASKIN1Q8WXD9 1431 aa7.29□□□□□ -1.24
RGPD6-210ENST00000484024 GAPVD1Q14C86 1478 aa7.28□□□□□ -1.24
RGPD6-210ENST00000484024 WDR97A6NE52 1622 aa7.28□□□□□ -1.24
RGPD6-210ENST00000484024 FMN1Q68DA7 1419 aa7.27□□□□□ -1.24
RGPD6-210ENST00000484024 SETD5Q9C0A6 1442 aa7.27□□□□□ -1.24
RGPD6-210ENST00000484024 CTTNBP2Q8WZ74 1663 aa7.27□□□□□ -1.25
RGPD6-210ENST00000484024 ABCA5Q8WWZ7 1642 aa7.27□□□□□ -1.25
RGPD6-210ENST00000484024 GTF3C3Q9Y5Q9 886 aa7.26□□□□□ -1.25
RGPD6-210ENST00000484024 DMRT2Q9Y5R5 561 aa7.26□□□□□ -1.25
RGPD6-210ENST00000484024 CLASP1Q7Z460 1538 aa7.25□□□□□ -1.25
RGPD6-210ENST00000484024 SNAPC4Q5SXM2 1469 aa7.25□□□□□ -1.25
RGPD6-210ENST00000484024 MTUS2Q5JR59 1369 aa7.24□□□□□ -1.25
RGPD6-210ENST00000484024 CHMP7Q8WUX9 453 aaPredicted RBP7.24□□□□□ -1.25
RGPD6-210ENST00000484024 MAPKBP1O60336 1514 aa7.23□□□□□ -1.25
RGPD6-210ENST00000484024 SAMD9Q5K651 1589 aa7.23□□□□□ -1.25
RGPD6-210ENST00000484024 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.22□□□□□ -1.25
RGPD6-210ENST00000484024 FGD6Q6ZV73 1430 aa7.22□□□□□ -1.25
RGPD6-210ENST00000484024 NPM3O75607 178 aaKnown RBP7.21□□□□□ -1.26
RGPD6-210ENST00000484024 GRIN2BQ13224 1484 aa7.2□□□□□ -1.26
RGPD6-210ENST00000484024 SIN3AQ96ST3 1273 aa7.2□□□□□ -1.26
RGPD6-210ENST00000484024 PBRM1Q86U86 1689 aa7.19□□□□□ -1.26
RGPD6-210ENST00000484024 NCOA2Q15596 1464 aa7.19□□□□□ -1.26
RGPD6-210ENST00000484024 MAGI1Q96QZ7 1491 aaPredicted RBP7.19□□□□□ -1.26
RGPD6-210ENST00000484024 SYNJ2O15056 1496 aa7.18□□□□□ -1.26
RGPD6-210ENST00000484024 ERCC6L2Q5T890 1561 aa7.18□□□□□ -1.26
RGPD6-210ENST00000484024 MYOM3Q5VTT5 1437 aa7.18□□□□□ -1.26
RGPD6-210ENST00000484024 PELP1Q8IZL8 1130 aaKnown RBP7.18□□□□□ -1.26
RGPD6-210ENST00000484024 EHBP1L1Q8N3D4 1523 aa7.17□□□□□ -1.26
RGPD6-210ENST00000484024 KIF13AQ9H1H9 1805 aa7.17□□□□□ -1.26
RGPD6-210ENST00000484024 LRRIQ1Q96JM4 1722 aa7.17□□□□□ -1.26
RGPD6-210ENST00000484024 ADAMTS12P58397 1594 aa7.17□□□□□ -1.26
RGPD6-210ENST00000484024 IQGAP2Q13576 1575 aa7.17□□□□□ -1.26
RGPD6-210ENST00000484024 CCDC18Q5T9S5 1454 aa7.17□□□□□ -1.26
RGPD6-210ENST00000484024 TIMELESSQ9UNS1 1208 aa7.16□□□□□ -1.26
RGPD6-210ENST00000484024 SUPT6HQ7KZ85 1726 aaKnown RBP7.16□□□□□ -1.26
RGPD6-210ENST00000484024 HFM1A2PYH4 1435 aa7.16□□□□□ -1.26
RGPD6-210ENST00000484024 PTPRKQ15262 1439 aa7.16□□□□□ -1.26
RGPD6-210ENST00000484024 RNF216Q9NWF9 866 aaPredicted RBP7.16□□□□□ -1.26
RGPD6-210ENST00000484024 HECW1Q76N89 1606 aa7.15□□□□□ -1.27
RGPD6-210ENST00000484024 ARID3CA6NKF2 412 aa7.15□□□□□ -1.27
RGPD6-210ENST00000484024 MAGI3Q5TCQ9 1506 aa7.14□□□□□ -1.27
RGPD6-210ENST00000484024 UGGT2Q9NYU1 1516 aa7.14□□□□□ -1.27
RGPD6-210ENST00000484024 UACAQ9BZF9 1416 aa7.14□□□□□ -1.27
RGPD6-210ENST00000484024 PTPN23Q9H3S7 1636 aa7.14□□□□□ -1.27
RGPD6-210ENST00000484024 EPRSP07814 1512 aaKnown RBP7.14□□□□□ -1.27
RGPD6-210ENST00000484024 NAIPQ13075 1403 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms