RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 ARHGAP35Q9NRY4 1499 aa25.72■■□□□ 1.71
RFTN1-209ENST00000483671 EFCAB5A4FU69 1503 aa25.7■■□□□ 1.71
RFTN1-209ENST00000483671 NUP160Q12769 1436 aa25.7■■□□□ 1.7
RFTN1-209ENST00000483671 KIAA0586Q9BVV6 1533 aa25.7■■□□□ 1.7
RFTN1-209ENST00000483671 ARAP1Q96P48 1450 aa25.68■■□□□ 1.7
RFTN1-209ENST00000483671 IQGAP2Q13576 1575 aa25.68■■□□□ 1.7
RFTN1-209ENST00000483671 VPS8Q8N3P4 1428 aa25.67■■□□□ 1.7
RFTN1-209ENST00000483671 CEP170Q5SW79 1584 aa25.64■■□□□ 1.69
RFTN1-209ENST00000483671 SAMD9Q5K651 1589 aa25.62■■□□□ 1.69
RFTN1-209ENST00000483671 UGGT2Q9NYU1 1516 aa25.61■■□□□ 1.69
RFTN1-209ENST00000483671 RANGAP1P46060 587 aaPredicted RBP25.6■■□□□ 1.69
RFTN1-209ENST00000483671 FBLN2P98095 1184 aa25.58■■□□□ 1.69
RFTN1-209ENST00000483671 CHD1O14646 1710 aa25.57■■□□□ 1.68
RFTN1-209ENST00000483671 FHOD3Q2V2M9 1422 aa25.47■■□□□ 1.67
RFTN1-209ENST00000483671 DISP1Q96F81 1524 aa25.45■■□□□ 1.66
RFTN1-209ENST00000483671 FMN1Q68DA7 1419 aa25.44■■□□□ 1.66
RFTN1-209ENST00000483671 KIAA0556O60303 1618 aa25.42■■□□□ 1.66
RFTN1-209ENST00000483671 JPH4Q96JJ6 628 aa25.39■■□□□ 1.66
RFTN1-209ENST00000483671 P3H3Q8IVL6 736 aa25.38■■□□□ 1.65
RFTN1-209ENST00000483671 CLASP1Q7Z460 1538 aa25.38■■□□□ 1.65
RFTN1-209ENST00000483671 SHROOM2Q13796 1616 aa25.38■■□□□ 1.65
RFTN1-209ENST00000483671 CASKIN1Q8WXD9 1431 aa25.36■■□□□ 1.65
RFTN1-209ENST00000483671 FYCO1Q9BQS8 1478 aa25.36■■□□□ 1.65
RFTN1-209ENST00000483671 MAP3K1Q13233 1512 aa25.35■■□□□ 1.65
RFTN1-209ENST00000483671 CARMIL2Q6F5E8 1435 aa25.35■■□□□ 1.65
RFTN1-209ENST00000483671 PCF11O94913 1555 aaKnown RBP25.33■■□□□ 1.65
RFTN1-209ENST00000483671 APLP2Q06481 763 aa25.28■■□□□ 1.64
RFTN1-209ENST00000483671 PRG4Q92954 1404 aaPredicted RBP25.26■■□□□ 1.63
RFTN1-209ENST00000483671 TIAM1Q13009 1591 aa25.22■■□□□ 1.63
RFTN1-209ENST00000483671 CFAP43Q8NDM7 1665 aa25.2■■□□□ 1.63
RFTN1-209ENST00000483671 HECW1Q76N89 1606 aa25.18■■□□□ 1.62
RFTN1-209ENST00000483671 OSCARQ8IYS5 282 aa25.17■■□□□ 1.62
RFTN1-209ENST00000483671 TRIM26Q12899 539 aaPredicted RBP25.16■■□□□ 1.62
RFTN1-209ENST00000483671 CCDC18Q5T9S5 1454 aa25.14■■□□□ 1.62
RFTN1-209ENST00000483671 PPARGC1BQ86YN6 1023 aaKnown RBP25.13■■□□□ 1.61
RFTN1-209ENST00000483671 RAPGEF6Q8TEU7 1601 aa25.13■■□□□ 1.61
RFTN1-209ENST00000483671 LRRC9Q6ZRR7 1453 aa25.11■■□□□ 1.61
RFTN1-209ENST00000483671 ABCA8O94911 1581 aa25.1■■□□□ 1.61
RFTN1-209ENST00000483671 KANK4Q5T7N3 995 aaPredicted RBP25.1■■□□□ 1.61
RFTN1-209ENST00000483671 PTPRGP23470 1445 aa25.09■■□□□ 1.61
RFTN1-209ENST00000483671 LRRIQ1Q96JM4 1722 aa25.09■■□□□ 1.61
RFTN1-209ENST00000483671 EPRSP07814 1512 aaKnown RBP25.08■■□□□ 1.61
RFTN1-209ENST00000483671 ERCC6L2Q5T890 1561 aa25.08■■□□□ 1.61
RFTN1-209ENST00000483671 NUP153P49790 1475 aaKnown RBP25.08■■□□□ 1.61
RFTN1-209ENST00000483671 PLB1Q6P1J6 1458 aa25.06■■□□□ 1.6
RFTN1-209ENST00000483671 ATP1B4Q9UN42 357 aaPredicted RBP25.05■■□□□ 1.6
RFTN1-209ENST00000483671 UACAQ9BZF9 1416 aa24.98■■□□□ 1.59
RFTN1-209ENST00000483671 EHBP1L1Q8N3D4 1523 aa24.97■■□□□ 1.59
RFTN1-209ENST00000483671 CDK13Q14004 1512 aaKnown RBP24.96■■□□□ 1.59
RFTN1-209ENST00000483671 PCGF6Q9BYE7 350 aa24.96■■□□□ 1.59
RFTN1-209ENST00000483671 TTBK1Q5TCY1 1321 aaPredicted RBP24.95■■□□□ 1.59
RFTN1-209ENST00000483671 MTUS2Q5JR59 1369 aa24.94■■□□□ 1.58
RFTN1-209ENST00000483671 UHRF1BP1LA0JNW5 1464 aa24.94■■□□□ 1.58
RFTN1-209ENST00000483671 ABCC2Q92887 1545 aa24.92■■□□□ 1.58
RFTN1-209ENST00000483671 MAGI3Q5TCQ9 1506 aa24.92■■□□□ 1.58
RFTN1-209ENST00000483671 ATP10BO94823 1461 aa24.89■■□□□ 1.57
RFTN1-209ENST00000483671 RRBP1Q9P2E9 1410 aaKnown RBP24.88■■□□□ 1.57
RFTN1-209ENST00000483671 ARHGEF11O15085 1522 aa24.88■■□□□ 1.57
RFTN1-209ENST00000483671 CDK11AQ9UQ88 783 aaPredicted RBP24.87■■□□□ 1.57
RFTN1-209ENST00000483671 SUPT6HQ7KZ85 1726 aaKnown RBP24.86■■□□□ 1.57
RFTN1-209ENST00000483671 PHLDB1Q86UU1 1377 aa24.83■■□□□ 1.57
RFTN1-209ENST00000483671 TROQ12816 1431 aaPredicted RBP24.83■■□□□ 1.57
RFTN1-209ENST00000483671 NCOA2Q15596 1464 aa24.83■■□□□ 1.57
RFTN1-209ENST00000483671 KDM5BQ9UGL1 1544 aa24.8■■□□□ 1.56
RFTN1-209ENST00000483671 ARID3CA6NKF2 412 aa24.79■■□□□ 1.56
RFTN1-209ENST00000483671 ADCY10Q96PN6 1610 aa24.77■■□□□ 1.56
RFTN1-209ENST00000483671 CCNB3Q8WWL7 1395 aa24.77■■□□□ 1.56
RFTN1-209ENST00000483671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.75■■□□□ 1.55
RFTN1-209ENST00000483671 HNRNPUL2Q1KMD3 747 aaKnown RBP24.75■■□□□ 1.55
RFTN1-209ENST00000483671 MYOM3Q5VTT5 1437 aa24.74■■□□□ 1.55
RFTN1-209ENST00000483671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.73■■□□□ 1.55
RFTN1-209ENST00000483671 PLEKHD1A6NEE1 506 aa24.73■■□□□ 1.55
RFTN1-209ENST00000483671 ZCCHC11Q5TAX3 1644 aaKnown RBP24.7■■□□□ 1.55
RFTN1-209ENST00000483671 FGD6Q6ZV73 1430 aa24.7■■□□□ 1.54
RFTN1-209ENST00000483671 MIA2Q96PC5 1412 aa24.67■■□□□ 1.54
RFTN1-209ENST00000483671 KIF14Q15058 1648 aa24.67■■□□□ 1.54
RFTN1-209ENST00000483671 ABCC10Q5T3U5 1492 aa24.64■■□□□ 1.53
RFTN1-209ENST00000483671 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.53
RFTN1-209ENST00000483671 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.53
RFTN1-209ENST00000483671 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.53
RFTN1-209ENST00000483671 TCOF1Q13428 1488 aaKnown RBP24.62■■□□□ 1.53
RFTN1-209ENST00000483671 PTPN23Q9H3S7 1636 aa24.58■■□□□ 1.52
RFTN1-209ENST00000483671 ITSN2Q9NZM3 1697 aa24.57■■□□□ 1.52
RFTN1-209ENST00000483671 GPATCH8Q9UKJ3 1502 aaKnown RBP24.57■■□□□ 1.52
RFTN1-209ENST00000483671 WDR7Q9Y4E6 1490 aa24.54■■□□□ 1.52
RFTN1-209ENST00000483671 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
RFTN1-209ENST00000483671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.51■■□□□ 1.51
RFTN1-209ENST00000483671 CDC42BPAQ5VT25 1732 aa24.5■■□□□ 1.51
RFTN1-209ENST00000483671 NPM1P06748 294 aaKnown RBP eCLIP24.48■■□□□ 1.51
RFTN1-209ENST00000483671 ASXL2Q76L83 1435 aa24.48■■□□□ 1.51
RFTN1-209ENST00000483671 TTC37Q6PGP7 1564 aa24.46■■□□□ 1.51
RFTN1-209ENST00000483671 PREX2Q70Z35 1606 aa24.45■■□□□ 1.51
RFTN1-209ENST00000483671 CFDP1Q9UEE9 299 aaPredicted RBP24.45■■□□□ 1.5
RFTN1-209ENST00000483671 CYB5RLQ6IPT4 315 aa24.43■■□□□ 1.5
RFTN1-209ENST00000483671 MAPKBP1O60336 1514 aa24.43■■□□□ 1.5
RFTN1-209ENST00000483671 ARAP3Q8WWN8 1544 aa24.42■■□□□ 1.5
RFTN1-209ENST00000483671 CAMSAP2Q08AD1 1489 aa24.41■■□□□ 1.5
RFTN1-209ENST00000483671 MYO5CQ9NQX4 1742 aa24.4■■□□□ 1.5
RFTN1-209ENST00000483671 ABCA9Q8IUA7 1624 aa24.39■■□□□ 1.5
RFTN1-209ENST00000483671 CDC42BPBQ9Y5S2 1711 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms