RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 KIAA0586Q9BVV6 1533 aa29.3■■■□□ 2.28
CPNE1-224ENST00000483359 CTTNBP2Q8WZ74 1663 aa29.29■■■□□ 2.28
CPNE1-224ENST00000483359 GOLGA3Q08378 1498 aa29.27■■■□□ 2.28
CPNE1-224ENST00000483359 IQGAP2Q13576 1575 aa29.26■■■□□ 2.27
CPNE1-224ENST00000483359 SHROOM2Q13796 1616 aa29.21■■■□□ 2.27
CPNE1-224ENST00000483359 UBTFP17480 764 aaKnown RBP29.19■■■□□ 2.26
CPNE1-224ENST00000483359 ARHGEF11O15085 1522 aa29.18■■■□□ 2.26
CPNE1-224ENST00000483359 JPH4Q96JJ6 628 aa29.18■■■□□ 2.26
CPNE1-224ENST00000483359 RIMBP3CA6NJZ7 1639 aa29.15■■■□□ 2.26
CPNE1-224ENST00000483359 RIMBP3BA6NNM3 1639 aa29.15■■■□□ 2.26
CPNE1-224ENST00000483359 RIMBP3Q9UFD9 1639 aa29.15■■■□□ 2.26
CPNE1-224ENST00000483359 ERCC6L2Q5T890 1561 aa29.15■■■□□ 2.26
CPNE1-224ENST00000483359 PRG4Q92954 1404 aaPredicted RBP29.13■■■□□ 2.25
CPNE1-224ENST00000483359 RANGAP1P46060 587 aaPredicted RBP29.1■■■□□ 2.25
CPNE1-224ENST00000483359 UGGT2Q9NYU1 1516 aa29.05■■■□□ 2.24
CPNE1-224ENST00000483359 LOC105371045A0A1W2PR82 267 aa29.04■■■□□ 2.24
CPNE1-224ENST00000483359 DISP1Q96F81 1524 aa29■■■□□ 2.23
CPNE1-224ENST00000483359 CARMIL2Q6F5E8 1435 aa28.98■■■□□ 2.23
CPNE1-224ENST00000483359 ARAP1Q96P48 1450 aa28.98■■■□□ 2.23
CPNE1-224ENST00000483359 KIAA0556O60303 1618 aa28.98■■■□□ 2.23
CPNE1-224ENST00000483359 TTBK1Q5TCY1 1321 aaPredicted RBP28.95■■■□□ 2.22
CPNE1-224ENST00000483359 TNIKQ9UKE5 1360 aa28.93■■■□□ 2.22
CPNE1-224ENST00000483359 P3H3Q8IVL6 736 aa28.92■■■□□ 2.22
CPNE1-224ENST00000483359 SAMD9Q5K651 1589 aa28.91■■■□□ 2.22
CPNE1-224ENST00000483359 CYB5RLQ6IPT4 315 aa28.9■■■□□ 2.22
CPNE1-224ENST00000483359 EFCAB5A4FU69 1503 aa28.83■■■□□ 2.21
CPNE1-224ENST00000483359 PTPRGP23470 1445 aa28.81■■■□□ 2.2
CPNE1-224ENST00000483359 FHOD3Q2V2M9 1422 aa28.81■■■□□ 2.2
CPNE1-224ENST00000483359 ARHGAP35Q9NRY4 1499 aa28.79■■■□□ 2.2
CPNE1-224ENST00000483359 CLIP1P30622 1438 aa28.77■■■□□ 2.2
CPNE1-224ENST00000483359 CEP162Q5TB80 1403 aa28.76■■■□□ 2.19
CPNE1-224ENST00000483359 PLB1Q6P1J6 1458 aa28.67■■■□□ 2.18
CPNE1-224ENST00000483359 ADCY10Q96PN6 1610 aa28.65■■■□□ 2.18
CPNE1-224ENST00000483359 UACAQ9BZF9 1416 aa28.63■■■□□ 2.17
CPNE1-224ENST00000483359 ABCA8O94911 1581 aa28.59■■■□□ 2.17
CPNE1-224ENST00000483359 ABCC2Q92887 1545 aa28.59■■■□□ 2.17
CPNE1-224ENST00000483359 FMN1Q68DA7 1419 aa28.56■■■□□ 2.16
CPNE1-224ENST00000483359 RAPGEF6Q8TEU7 1601 aa28.56■■■□□ 2.16
CPNE1-224ENST00000483359 UHRF1BP1LA0JNW5 1464 aa28.54■■■□□ 2.16
CPNE1-224ENST00000483359 ARID3CA6NKF2 412 aa28.53■■■□□ 2.16
CPNE1-224ENST00000483359 PCF11O94913 1555 aaKnown RBP28.48■■■□□ 2.15
CPNE1-224ENST00000483359 ATP1B4Q9UN42 357 aaPredicted RBP28.48■■■□□ 2.15
CPNE1-224ENST00000483359 NPM1P06748 294 aaKnown RBP eCLIP28.46■■■□□ 2.15
CPNE1-224ENST00000483359 NUP153P49790 1475 aaKnown RBP28.45■■■□□ 2.15
CPNE1-224ENST00000483359 ZCCHC11Q5TAX3 1644 aaKnown RBP28.45■■■□□ 2.14
CPNE1-224ENST00000483359 KDM5BQ9UGL1 1544 aa28.43■■■□□ 2.14
CPNE1-224ENST00000483359 HECW1Q76N89 1606 aa28.42■■■□□ 2.14
CPNE1-224ENST00000483359 CASKIN1Q8WXD9 1431 aa28.38■■■□□ 2.13
CPNE1-224ENST00000483359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.37■■■□□ 2.13
CPNE1-224ENST00000483359 HNRNPUL2Q1KMD3 747 aaKnown RBP28.37■■■□□ 2.13
CPNE1-224ENST00000483359 ATP10BO94823 1461 aa28.36■■■□□ 2.13
CPNE1-224ENST00000483359 FYCO1Q9BQS8 1478 aa28.36■■■□□ 2.13
CPNE1-224ENST00000483359 VPS8Q8N3P4 1428 aa28.36■■■□□ 2.13
CPNE1-224ENST00000483359 CDK13Q14004 1512 aaKnown RBP28.35■■■□□ 2.13
CPNE1-224ENST00000483359 LRRIQ1Q96JM4 1722 aa28.34■■■□□ 2.13
CPNE1-224ENST00000483359 MAPKBP1O60336 1514 aa28.33■■■□□ 2.13
CPNE1-224ENST00000483359 EPRSP07814 1512 aaKnown RBP28.32■■■□□ 2.12
CPNE1-224ENST00000483359 ASXL2Q76L83 1435 aa28.3■■■□□ 2.12
CPNE1-224ENST00000483359 CCDC18Q5T9S5 1454 aa28.23■■■□□ 2.11
CPNE1-224ENST00000483359 WDR7Q9Y4E6 1490 aa28.23■■■□□ 2.11
CPNE1-224ENST00000483359 TRHP20396 242 aaPredicted RBP28.2■■■□□ 2.1
CPNE1-224ENST00000483359 DIP2BQ9P265 1576 aa28.16■■■□□ 2.1
CPNE1-224ENST00000483359 KCNH8Q96L42 1107 aa28.16■■■□□ 2.1
CPNE1-224ENST00000483359 ABCC10Q5T3U5 1492 aa28.15■■■□□ 2.1
CPNE1-224ENST00000483359 PLEKHD1A6NEE1 506 aa28.15■■■□□ 2.1
CPNE1-224ENST00000483359 KIF13AQ9H1H9 1805 aa28.13■■■□□ 2.09
CPNE1-224ENST00000483359 CFAP43Q8NDM7 1665 aa28.12■■■□□ 2.09
CPNE1-224ENST00000483359 MAGI3Q5TCQ9 1506 aa28.11■■■□□ 2.09
CPNE1-224ENST00000483359 FAM69CQ0P6D2 419 aa28.11■■■□□ 2.09
CPNE1-224ENST00000483359 CDK11AQ9UQ88 783 aaPredicted RBP28.11■■■□□ 2.09
CPNE1-224ENST00000483359 TIAM1Q13009 1591 aa28.1■■■□□ 2.09
CPNE1-224ENST00000483359 TROQ12816 1431 aaPredicted RBP28.05■■■□□ 2.08
CPNE1-224ENST00000483359 APLP2Q06481 763 aa28.03■■■□□ 2.08
CPNE1-224ENST00000483359 KIF14Q15058 1648 aa28.03■■■□□ 2.08
CPNE1-224ENST00000483359 MTUS2Q5JR59 1369 aa28.02■■■□□ 2.08
CPNE1-224ENST00000483359 GLI2P10070 1586 aa28.01■■■□□ 2.07
CPNE1-224ENST00000483359 EHBP1L1Q8N3D4 1523 aa27.98■■■□□ 2.07
CPNE1-224ENST00000483359 TSPOAP1O95153 1857 aa27.98■■■□□ 2.07
CPNE1-224ENST00000483359 TTC37Q6PGP7 1564 aa27.97■■■□□ 2.07
CPNE1-224ENST00000483359 MAP3K1Q13233 1512 aa27.97■■■□□ 2.07
CPNE1-224ENST00000483359 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.97■■■□□ 2.071e-38■■□□□ 13.2
CPNE1-224ENST00000483359 MAP3K4Q9Y6R4 1608 aa27.97■■■□□ 2.07
CPNE1-224ENST00000483359 ABCA9Q8IUA7 1624 aa27.96■■■□□ 2.07
CPNE1-224ENST00000483359 KANK4Q5T7N3 995 aaPredicted RBP27.95■■■□□ 2.07
CPNE1-224ENST00000483359 LRRC9Q6ZRR7 1453 aa27.95■■■□□ 2.07
CPNE1-224ENST00000483359 CD109Q6YHK3 1445 aa27.91■■■□□ 2.06
CPNE1-224ENST00000483359 PPRC1Q5VV67 1664 aaKnown RBP27.87■■■□□ 2.05
CPNE1-224ENST00000483359 SUPT6HQ7KZ85 1726 aaKnown RBP27.86■■■□□ 2.05
CPNE1-224ENST00000483359 PPARGC1BQ86YN6 1023 aaKnown RBP27.84■■■□□ 2.05
CPNE1-224ENST00000483359 MYO5CQ9NQX4 1742 aa27.83■■■□□ 2.05
CPNE1-224ENST00000483359 NCOA2Q15596 1464 aa27.82■■■□□ 2.04
CPNE1-224ENST00000483359 CDC42BPAQ5VT25 1732 aa27.78■■■□□ 2.04
CPNE1-224ENST00000483359 TEX14Q8IWB6 1497 aa27.77■■■□□ 2.04
CPNE1-224ENST00000483359 CCNB3Q8WWL7 1395 aa27.76■■■□□ 2.04
CPNE1-224ENST00000483359 PREX2Q70Z35 1606 aa27.76■■■□□ 2.03
CPNE1-224ENST00000483359 PLCH2O75038 1416 aa27.75■■■□□ 2.03
CPNE1-224ENST00000483359 ARHGAP5Q13017 1502 aa27.75■■■□□ 2.03
CPNE1-224ENST00000483359 CDC42BPBQ9Y5S2 1711 aa27.74■■■□□ 2.03
CPNE1-224ENST00000483359 GPATCH8Q9UKJ3 1502 aaKnown RBP27.73■■■□□ 2.03
CPNE1-224ENST00000483359 FANCAO15360 1455 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms