RNA–Protein interactions for RNA: ENST00000483311.5

ATXN2-210, Transcript of ataxin 2, humanhuman

TSL 1 (best)

Gene ATXN2, Length 4,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-210ENST00000483311 CCNB3Q8WWL7 1395 aa16.72■□□□□ 0.27
ATXN2-210ENST00000483311 RRP7BPQ9NSQ0 103 aa16.71■□□□□ 0.27
ATXN2-210ENST00000483311 CUX1P39880 1505 aa16.7■□□□□ 0.26
ATXN2-210ENST00000483311 FHOD3Q2V2M9 1422 aa16.68■□□□□ 0.26
ATXN2-210ENST00000483311 TOP2BQ02880 1626 aa16.68■□□□□ 0.26
ATXN2-210ENST00000483311 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
ATXN2-210ENST00000483311 PLEKHD1A6NEE1 506 aa16.63■□□□□ 0.25
ATXN2-210ENST00000483311 NEFLP07196 543 aa16.62■□□□□ 0.25
ATXN2-210ENST00000483311 KIF21BO75037 1637 aa16.61■□□□□ 0.25
ATXN2-210ENST00000483311 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
ATXN2-210ENST00000483311 FMN1Q68DA7 1419 aa16.59■□□□□ 0.25
ATXN2-210ENST00000483311 KCNH8Q96L42 1107 aa16.58■□□□□ 0.25
ATXN2-210ENST00000483311 TSPY4P0CV99 314 aa16.58■□□□□ 0.24
ATXN2-210ENST00000483311 TSPY10P0CW01 314 aa16.58■□□□□ 0.24
ATXN2-210ENST00000483311 CFDP1Q9UEE9 299 aaPredicted RBP16.58■□□□□ 0.24
ATXN2-210ENST00000483311 PRXQ9BXM0 1461 aa16.57■□□□□ 0.24
ATXN2-210ENST00000483311 SIN3AQ96ST3 1273 aa16.55■□□□□ 0.24
ATXN2-210ENST00000483311 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
ATXN2-210ENST00000483311 ANP32CO43423 234 aa16.55■□□□□ 0.24
ATXN2-210ENST00000483311 HIRIP3Q9BW71 556 aaPredicted RBP16.54■□□□□ 0.24
ATXN2-210ENST00000483311 ARHGAP35Q9NRY4 1499 aa16.53■□□□□ 0.24
ATXN2-210ENST00000483311 DDX10Q13206 875 aaKnown RBP16.53■□□□□ 0.24
ATXN2-210ENST00000483311 AQRO60306 1485 aaKnown RBP eCLIP16.52■□□□□ 0.241e-6■■■■■ 28.2
ATXN2-210ENST00000483311 POLA1P09884 1462 aaPredicted RBP16.52■□□□□ 0.24
ATXN2-210ENST00000483311 ERICH3Q5RHP9 1530 aa16.52■□□□□ 0.24
ATXN2-210ENST00000483311 NPM1P06748 294 aaKnown RBP eCLIP16.52■□□□□ 0.23
ATXN2-210ENST00000483311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.233e-7■■□□□ 13.5
ATXN2-210ENST00000483311 ARAP1Q96P48 1450 aa16.5■□□□□ 0.23
ATXN2-210ENST00000483311 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
ATXN2-210ENST00000483311 MIER1Q8N108 512 aa16.49■□□□□ 0.23
ATXN2-210ENST00000483311 GTF3C3Q9Y5Q9 886 aa16.48■□□□□ 0.23
ATXN2-210ENST00000483311 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
ATXN2-210ENST00000483311 SETD5Q9C0A6 1442 aa16.46■□□□□ 0.23
ATXN2-210ENST00000483311 ACIN1Q9UKV3 1341 aaKnown RBP16.46■□□□□ 0.23
ATXN2-210ENST00000483311 RAB3GAP2Q9H2M9 1393 aa16.45■□□□□ 0.22
ATXN2-210ENST00000483311 JPH4Q96JJ6 628 aa16.45■□□□□ 0.22
ATXN2-210ENST00000483311 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
ATXN2-210ENST00000483311 CARMIL2Q6F5E8 1435 aa16.44■□□□□ 0.22
ATXN2-210ENST00000483311 DNMBPQ6XZF7 1577 aa16.44■□□□□ 0.22
ATXN2-210ENST00000483311 KDM2AQ9Y2K7 1162 aa16.39■□□□□ 0.21
ATXN2-210ENST00000483311 MRC2Q9UBG0 1479 aa16.38■□□□□ 0.21
ATXN2-210ENST00000483311 BIVM-ERCC5R4GMW8 1640 aa16.38■□□□□ 0.21
ATXN2-210ENST00000483311 LAMC3Q9Y6N6 1575 aa16.37■□□□□ 0.21
ATXN2-210ENST00000483311 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
ATXN2-210ENST00000483311 GRIN2BQ13224 1484 aa16.34■□□□□ 0.21
ATXN2-210ENST00000483311 PHLDB1Q86UU1 1377 aa16.33■□□□□ 0.2
ATXN2-210ENST00000483311 DHX57Q6P158 1386 aaKnown RBP16.32■□□□□ 0.2
ATXN2-210ENST00000483311 URB2Q14146 1524 aaKnown RBP16.32■□□□□ 0.2
ATXN2-210ENST00000483311 CHGAP10645 457 aaKnown RBP16.3■□□□□ 0.2
ATXN2-210ENST00000483311 FOXD1Q16676 465 aa16.3■□□□□ 0.2
ATXN2-210ENST00000483311 LRRC9Q6ZRR7 1453 aa16.3■□□□□ 0.2
ATXN2-210ENST00000483311 EIF4G2P78344 907 aaKnown RBP eCLIP16.3■□□□□ 0.23e-9■■■■□ 21.5
ATXN2-210ENST00000483311 CASKIN1Q8WXD9 1431 aa16.28■□□□□ 0.2
ATXN2-210ENST00000483311 RGL3Q3MIN7 710 aa16.27■□□□□ 0.2
ATXN2-210ENST00000483311 CCDC18Q5T9S5 1454 aa16.26■□□□□ 0.19
ATXN2-210ENST00000483311 BCANQ96GW7 911 aa16.26■□□□□ 0.19
ATXN2-210ENST00000483311 IFT140Q96RY7 1462 aa16.26■□□□□ 0.19
ATXN2-210ENST00000483311 MPHOSPH9Q99550 1183 aa16.22■□□□□ 0.19
ATXN2-210ENST00000483311 TIMELESSQ9UNS1 1208 aa16.22■□□□□ 0.19
ATXN2-210ENST00000483311 PTPRGP23470 1445 aa16.21■□□□□ 0.19
ATXN2-210ENST00000483311 FGD6Q6ZV73 1430 aa16.21■□□□□ 0.19
ATXN2-210ENST00000483311 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
ATXN2-210ENST00000483311 FYCO1Q9BQS8 1478 aa16.2■□□□□ 0.18
ATXN2-210ENST00000483311 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.181e-6■■□□□ 14.5
ATXN2-210ENST00000483311 EFCAB5A4FU69 1503 aa16.2■□□□□ 0.18
ATXN2-210ENST00000483311 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
ATXN2-210ENST00000483311 RRBP1Q9P2E9 1410 aaKnown RBP16.18■□□□□ 0.18
ATXN2-210ENST00000483311 PKD2Q13563 968 aa16.18■□□□□ 0.18
ATXN2-210ENST00000483311 ZNF644Q9H582 1327 aaPredicted RBP16.17■□□□□ 0.18
ATXN2-210ENST00000483311 FAM9BQ8IZU0 186 aa16.17■□□□□ 0.18
ATXN2-210ENST00000483311 HNRNPUQ00839 825 aaKnown RBP eCLIP16.17■□□□□ 0.18
ATXN2-210ENST00000483311 MYOM3Q5VTT5 1437 aa16.17■□□□□ 0.18
ATXN2-210ENST00000483311 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
ATXN2-210ENST00000483311 PPP1R15AO75807 674 aaPredicted RBP16.16■□□□□ 0.18
ATXN2-210ENST00000483311 TIAM1Q13009 1591 aa16.16■□□□□ 0.18
ATXN2-210ENST00000483311 NCOA2Q15596 1464 aa16.15■□□□□ 0.18
ATXN2-210ENST00000483311 PRDM2Q13029 1718 aa16.14■□□□□ 0.17
ATXN2-210ENST00000483311 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.17
ATXN2-210ENST00000483311 ANKRD30AQ9BXX3 1397 aa16.14■□□□□ 0.17
ATXN2-210ENST00000483311 ESF1Q9H501 851 aaKnown RBP16.13■□□□□ 0.17
ATXN2-210ENST00000483311 CUL7Q14999 1698 aa16.12■□□□□ 0.17
ATXN2-210ENST00000483311 EFCAB2Q5VUJ9 269 aa16.12■□□□□ 0.17
ATXN2-210ENST00000483311 NUP155O75694 1391 aa16.12■□□□□ 0.17
ATXN2-210ENST00000483311 CARD11Q9BXL7 1154 aa16.11■□□□□ 0.17
ATXN2-210ENST00000483311 MRS2Q9HD23 443 aa16.11■□□□□ 0.17
ATXN2-210ENST00000483311 STAG3Q9UJ98 1225 aa16.09■□□□□ 0.17
ATXN2-210ENST00000483311 DCAF11Q8TEB1 546 aa16.09■□□□□ 0.17
ATXN2-210ENST00000483311 PCF11O94913 1555 aaKnown RBP16.09■□□□□ 0.17
ATXN2-210ENST00000483311 L3MBTL2Q969R5 705 aa16.08■□□□□ 0.17
ATXN2-210ENST00000483311 HSPA5P11021 654 aaKnown RBP16.07■□□□□ 0.16
ATXN2-210ENST00000483311 ERICH6Q7L0X2 663 aa16.07■□□□□ 0.16
ATXN2-210ENST00000483311 KIAA0586Q9BVV6 1533 aa16.06■□□□□ 0.16
ATXN2-210ENST00000483311 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
ATXN2-210ENST00000483311 TMC1Q8TDI8 760 aa16.05■□□□□ 0.16
ATXN2-210ENST00000483311 PRG4Q92954 1404 aaPredicted RBP16.05■□□□□ 0.16
ATXN2-210ENST00000483311 IQGAP2Q13576 1575 aa16.04■□□□□ 0.16
ATXN2-210ENST00000483311 FKBP8Q14318 412 aa16.04■□□□□ 0.16
ATXN2-210ENST00000483311 SALL2Q9Y467 1007 aaPredicted RBP16.02■□□□□ 0.15
ATXN2-210ENST00000483311 CDK13Q14004 1512 aaKnown RBP16.01■□□□□ 0.15
ATXN2-210ENST00000483311 RSPH4AQ5TD94 716 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms