RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 CSRNP3Q8WYN3 585 aa20.24■□□□□ 0.83
TSPAN1-208ENST00000482928 RUSC2Q8N2Y8 1516 aa20.23■□□□□ 0.83
TSPAN1-208ENST00000482928 SPATA31D1Q6ZQQ2 1576 aa20.23■□□□□ 0.83
TSPAN1-208ENST00000482928 DIP2BQ9P265 1576 aa20.23■□□□□ 0.83
TSPAN1-208ENST00000482928 MAGI1Q96QZ7 1491 aaPredicted RBP20.22■□□□□ 0.83
TSPAN1-208ENST00000482928 RAD54L2Q9Y4B4 1467 aa20.2■□□□□ 0.82
TSPAN1-208ENST00000482928 ABCA10Q8WWZ4 1543 aa20.18■□□□□ 0.82
TSPAN1-208ENST00000482928 LOC105371045A0A1W2PR82 267 aa20.17■□□□□ 0.82
TSPAN1-208ENST00000482928 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
TSPAN1-208ENST00000482928 TDRD9Q8NDG6 1382 aaKnown RBP20.14■□□□□ 0.81
TSPAN1-208ENST00000482928 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
TSPAN1-208ENST00000482928 KIF21BO75037 1637 aa20.09■□□□□ 0.81
TSPAN1-208ENST00000482928 GOLGA3Q08378 1498 aa20.08■□□□□ 0.81
TSPAN1-208ENST00000482928 CEP170Q5SW79 1584 aa20.08■□□□□ 0.8
TSPAN1-208ENST00000482928 MAPKBP1O60336 1514 aa20.07■□□□□ 0.8
TSPAN1-208ENST00000482928 UBTFP17480 764 aaKnown RBP20.04■□□□□ 0.8
TSPAN1-208ENST00000482928 ABCA5Q8WWZ7 1642 aa20.03■□□□□ 0.8
TSPAN1-208ENST00000482928 GRIN2BQ13224 1484 aa20.02■□□□□ 0.8
TSPAN1-208ENST00000482928 IGF1RP08069 1367 aa20■□□□□ 0.79
TSPAN1-208ENST00000482928 PBRM1Q86U86 1689 aa20■□□□□ 0.79
TSPAN1-208ENST00000482928 ERICH3Q5RHP9 1530 aa19.99■□□□□ 0.79
TSPAN1-208ENST00000482928 CUL7Q14999 1698 aa19.98■□□□□ 0.79
TSPAN1-208ENST00000482928 PRXQ9BXM0 1461 aa19.98■□□□□ 0.79
TSPAN1-208ENST00000482928 CARMIL1Q5VZK9 1371 aa19.96■□□□□ 0.79
TSPAN1-208ENST00000482928 RAPGEF2Q9Y4G8 1499 aa19.95■□□□□ 0.78
TSPAN1-208ENST00000482928 SHROOM2Q13796 1616 aa19.94■□□□□ 0.78
TSPAN1-208ENST00000482928 NPM1P06748 294 aaKnown RBP eCLIP19.93■□□□□ 0.78
TSPAN1-208ENST00000482928 TNIKQ9UKE5 1360 aa19.93■□□□□ 0.78
TSPAN1-208ENST00000482928 PPRC1Q5VV67 1664 aaKnown RBP19.84■□□□□ 0.77
TSPAN1-208ENST00000482928 FHAD1B1AJZ9 1412 aa19.83■□□□□ 0.76
TSPAN1-208ENST00000482928 CERKQ8TCT0 537 aa19.82■□□□□ 0.76
TSPAN1-208ENST00000482928 CEP162Q5TB80 1403 aa19.82■□□□□ 0.76
TSPAN1-208ENST00000482928 ADAMTS12P58397 1594 aa19.82■□□□□ 0.76
TSPAN1-208ENST00000482928 ADCY10Q96PN6 1610 aa19.81■□□□□ 0.76
TSPAN1-208ENST00000482928 GRIN2AQ12879 1464 aa19.78■□□□□ 0.76
TSPAN1-208ENST00000482928 RANGAP1P46060 587 aaPredicted RBP19.76■□□□□ 0.75
TSPAN1-208ENST00000482928 CLIP1P30622 1438 aa19.74■□□□□ 0.75
TSPAN1-208ENST00000482928 NUP160Q12769 1436 aa19.74■□□□□ 0.75
TSPAN1-208ENST00000482928 CTTNBP2Q8WZ74 1663 aa19.72■□□□□ 0.75
TSPAN1-208ENST00000482928 PCF11O94913 1555 aaKnown RBP19.72■□□□□ 0.75
TSPAN1-208ENST00000482928 COL17A1Q9UMD9 1497 aaPredicted RBP19.71■□□□□ 0.75
TSPAN1-208ENST00000482928 PRG4Q92954 1404 aaPredicted RBP19.7■□□□□ 0.74
TSPAN1-208ENST00000482928 GLI2P10070 1586 aa19.59■□□□□ 0.73
TSPAN1-208ENST00000482928 PTPRMP28827 1452 aa19.59■□□□□ 0.73
TSPAN1-208ENST00000482928 IQGAP2Q13576 1575 aa19.57■□□□□ 0.72
TSPAN1-208ENST00000482928 EFCAB5A4FU69 1503 aa19.56■□□□□ 0.72
TSPAN1-208ENST00000482928 ARHGAP35Q9NRY4 1499 aa19.54■□□□□ 0.72
TSPAN1-208ENST00000482928 KIAA0586Q9BVV6 1533 aa19.53■□□□□ 0.72
TSPAN1-208ENST00000482928 TEX14Q8IWB6 1497 aa19.53■□□□□ 0.72
TSPAN1-208ENST00000482928 VPS8Q8N3P4 1428 aa19.51■□□□□ 0.71
TSPAN1-208ENST00000482928 MAP3K4Q9Y6R4 1608 aa19.5■□□□□ 0.71
TSPAN1-208ENST00000482928 APLP2Q06481 763 aa19.48■□□□□ 0.71
TSPAN1-208ENST00000482928 ADAMTSL3P82987 1691 aa19.48■□□□□ 0.71
TSPAN1-208ENST00000482928 P3H3Q8IVL6 736 aa19.47■□□□□ 0.71
TSPAN1-208ENST00000482928 JPH4Q96JJ6 628 aa19.46■□□□□ 0.71
TSPAN1-208ENST00000482928 SAMD9Q5K651 1589 aa19.44■□□□□ 0.7
TSPAN1-208ENST00000482928 UGGT2Q9NYU1 1516 aa19.44■□□□□ 0.7
TSPAN1-208ENST00000482928 FHOD3Q2V2M9 1422 aa19.43■□□□□ 0.7
TSPAN1-208ENST00000482928 ASXL2Q76L83 1435 aa19.42■□□□□ 0.7
TSPAN1-208ENST00000482928 HSPA2P54652 639 aa19.42■□□□□ 0.7
TSPAN1-208ENST00000482928 PLB1Q6P1J6 1458 aa19.41■□□□□ 0.7
TSPAN1-208ENST00000482928 FMN1Q68DA7 1419 aa19.39■□□□□ 0.69
TSPAN1-208ENST00000482928 CARMIL2Q6F5E8 1435 aa19.38■□□□□ 0.69
TSPAN1-208ENST00000482928 KIAA0556O60303 1618 aa19.36■□□□□ 0.69
TSPAN1-208ENST00000482928 ATP1B4Q9UN42 357 aaPredicted RBP19.35■□□□□ 0.69
TSPAN1-208ENST00000482928 MADDQ8WXG6 1647 aa19.35■□□□□ 0.69
TSPAN1-208ENST00000482928 ABCC2Q92887 1545 aa19.31■□□□□ 0.68
TSPAN1-208ENST00000482928 DISP1Q96F81 1524 aa19.3■□□□□ 0.68
TSPAN1-208ENST00000482928 FYCO1Q9BQS8 1478 aa19.3■□□□□ 0.68
TSPAN1-208ENST00000482928 PPARGC1BQ86YN6 1023 aaKnown RBP19.3■□□□□ 0.68
TSPAN1-208ENST00000482928 EPRSP07814 1512 aaKnown RBP19.3■□□□□ 0.68
TSPAN1-208ENST00000482928 TTBK1Q5TCY1 1321 aaPredicted RBP19.29■□□□□ 0.68
TSPAN1-208ENST00000482928 BCORL1Q5H9F3 1711 aa19.28■□□□□ 0.68
TSPAN1-208ENST00000482928 CASKIN1Q8WXD9 1431 aa19.28■□□□□ 0.68
TSPAN1-208ENST00000482928 RIMS1Q86UR5 1692 aaKnown RBP19.28■□□□□ 0.68
TSPAN1-208ENST00000482928 MED1Q15648 1581 aaPredicted RBP19.26■□□□□ 0.67
TSPAN1-208ENST00000482928 HECW1Q76N89 1606 aa19.23■□□□□ 0.67
TSPAN1-208ENST00000482928 TIAM1Q13009 1591 aa19.2■□□□□ 0.66
TSPAN1-208ENST00000482928 TRIM26Q12899 539 aaPredicted RBP19.2■□□□□ 0.66
TSPAN1-208ENST00000482928 MAP3K1Q13233 1512 aa19.2■□□□□ 0.66
TSPAN1-208ENST00000482928 CFAP43Q8NDM7 1665 aa19.18■□□□□ 0.66
TSPAN1-208ENST00000482928 CCDC18Q5T9S5 1454 aa19.17■□□□□ 0.66
TSPAN1-208ENST00000482928 RAPGEF6Q8TEU7 1601 aa19.16■□□□□ 0.66
TSPAN1-208ENST00000482928 PTPRGP23470 1445 aa19.16■□□□□ 0.66
TSPAN1-208ENST00000482928 IQSEC2Q5JU85 1478 aa19.13■□□□□ 0.65
TSPAN1-208ENST00000482928 PLPPR3Q6T4P5 718 aa19.12■□□□□ 0.65
TSPAN1-208ENST00000482928 PCGF6Q9BYE7 350 aa19.11■□□□□ 0.65
TSPAN1-208ENST00000482928 STRCQ7RTU9 1775 aa19.11■□□□□ 0.65
TSPAN1-208ENST00000482928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.1■□□□□ 0.65
TSPAN1-208ENST00000482928 HNRNPUL2Q1KMD3 747 aaKnown RBP19.1■□□□□ 0.65
TSPAN1-208ENST00000482928 LRRC9Q6ZRR7 1453 aa19.09■□□□□ 0.65
TSPAN1-208ENST00000482928 MTUS2Q5JR59 1369 aa19.09■□□□□ 0.65
TSPAN1-208ENST00000482928 KANK4Q5T7N3 995 aaPredicted RBP19.09■□□□□ 0.65
TSPAN1-208ENST00000482928 MAGI3Q5TCQ9 1506 aa19.07■□□□□ 0.64
TSPAN1-208ENST00000482928 ARID3CA6NKF2 412 aa19.07■□□□□ 0.64
TSPAN1-208ENST00000482928 DMRT2Q9Y5R5 561 aa19.07■□□□□ 0.64
TSPAN1-208ENST00000482928 ZCCHC11Q5TAX3 1644 aaKnown RBP19.07■□□□□ 0.64
TSPAN1-208ENST00000482928 ARID4BQ4LE39 1312 aaPredicted RBP19.06■□□□□ 0.64
TSPAN1-208ENST00000482928 LRRIQ1Q96JM4 1722 aa19.06■□□□□ 0.64
TSPAN1-208ENST00000482928 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms