RNA–Protein interactions for RNA: ENST00000482128.1

SEMA4D-218, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-218ENST00000482128 KIAA0586Q9BVV6 1533 aa31.62■■■□□ 2.65
SEMA4D-218ENST00000482128 CTTNBP2Q8WZ74 1663 aa31.58■■■□□ 2.65
SEMA4D-218ENST00000482128 LOC105371045A0A1W2PR82 267 aa31.58■■■□□ 2.65
SEMA4D-218ENST00000482128 CLASP1Q7Z460 1538 aa31.55■■■□□ 2.64
SEMA4D-218ENST00000482128 IQGAP2Q13576 1575 aa31.55■■■□□ 2.64
SEMA4D-218ENST00000482128 TNIKQ9UKE5 1360 aa31.55■■■□□ 2.64
SEMA4D-218ENST00000482128 JPH4Q96JJ6 628 aa31.42■■■□□ 2.62
SEMA4D-218ENST00000482128 UGGT2Q9NYU1 1516 aa31.39■■■□□ 2.61
SEMA4D-218ENST00000482128 SHROOM2Q13796 1616 aa31.38■■■□□ 2.61
SEMA4D-218ENST00000482128 RANGAP1P46060 587 aaPredicted RBP31.34■■■□□ 2.61
SEMA4D-218ENST00000482128 PRG4Q92954 1404 aaPredicted RBP31.32■■■□□ 2.6
SEMA4D-218ENST00000482128 CARMIL2Q6F5E8 1435 aa31.31■■■□□ 2.6
SEMA4D-218ENST00000482128 CEP162Q5TB80 1403 aa31.29■■■□□ 2.6
SEMA4D-218ENST00000482128 EFCAB5A4FU69 1503 aa31.29■■■□□ 2.6
SEMA4D-218ENST00000482128 CLIP1P30622 1438 aa31.28■■■□□ 2.6
SEMA4D-218ENST00000482128 SAMD9Q5K651 1589 aa31.24■■■□□ 2.59
SEMA4D-218ENST00000482128 DISP1Q96F81 1524 aa31.24■■■□□ 2.59
SEMA4D-218ENST00000482128 KIAA0556O60303 1618 aa31.22■■■□□ 2.59
SEMA4D-218ENST00000482128 ARHGAP35Q9NRY4 1499 aa31.19■■■□□ 2.58
SEMA4D-218ENST00000482128 ARHGEF11O15085 1522 aa31.14■■■□□ 2.58
SEMA4D-218ENST00000482128 ERCC6L2Q5T890 1561 aa31.14■■■□□ 2.58
SEMA4D-218ENST00000482128 P3H3Q8IVL6 736 aa31.13■■■□□ 2.57
SEMA4D-218ENST00000482128 FHOD3Q2V2M9 1422 aa31.1■■■□□ 2.57
SEMA4D-218ENST00000482128 ARAP1Q96P48 1450 aa31.04■■■□□ 2.56
SEMA4D-218ENST00000482128 PTPRGP23470 1445 aa31.04■■■□□ 2.56
SEMA4D-218ENST00000482128 RIMBP3CA6NJZ7 1639 aa31.03■■■□□ 2.56
SEMA4D-218ENST00000482128 RIMBP3BA6NNM3 1639 aa31.03■■■□□ 2.56
SEMA4D-218ENST00000482128 RIMBP3Q9UFD9 1639 aa31.03■■■□□ 2.56
SEMA4D-218ENST00000482128 DNAJC5Q9H3Z4 198 aa31.02■■■□□ 2.56
SEMA4D-218ENST00000482128 FMN1Q68DA7 1419 aa31■■■□□ 2.55
SEMA4D-218ENST00000482128 TTBK1Q5TCY1 1321 aaPredicted RBP30.99■■■□□ 2.55
SEMA4D-218ENST00000482128 VPS8Q8N3P4 1428 aa30.88■■■□□ 2.53
SEMA4D-218ENST00000482128 UACAQ9BZF9 1416 aa30.85■■■□□ 2.53
SEMA4D-218ENST00000482128 PLB1Q6P1J6 1458 aa30.83■■■□□ 2.53
SEMA4D-218ENST00000482128 CYB5RLQ6IPT4 315 aa30.82■■■□□ 2.52
SEMA4D-218ENST00000482128 ABCA8O94911 1581 aa30.82■■■□□ 2.52
SEMA4D-218ENST00000482128 CASKIN1Q8WXD9 1431 aa30.81■■■□□ 2.52
SEMA4D-218ENST00000482128 RAPGEF6Q8TEU7 1601 aa30.8■■■□□ 2.52
SEMA4D-218ENST00000482128 ABCC2Q92887 1545 aa30.78■■■□□ 2.52
SEMA4D-218ENST00000482128 UHRF1BP1LA0JNW5 1464 aa30.78■■■□□ 2.52
SEMA4D-218ENST00000482128 FYCO1Q9BQS8 1478 aa30.78■■■□□ 2.52
SEMA4D-218ENST00000482128 PCF11O94913 1555 aaKnown RBP30.78■■■□□ 2.52
SEMA4D-218ENST00000482128 HECW1Q76N89 1606 aa30.76■■■□□ 2.51
SEMA4D-218ENST00000482128 ATP1B4Q9UN42 357 aaPredicted RBP30.74■■■□□ 2.51
SEMA4D-218ENST00000482128 NUP153P49790 1475 aaKnown RBP30.7■■■□□ 2.5
SEMA4D-218ENST00000482128 ADCY10Q96PN6 1610 aa30.69■■■□□ 2.5
SEMA4D-218ENST00000482128 CCDC18Q5T9S5 1454 aa30.64■■■□□ 2.5
SEMA4D-218ENST00000482128 EPRSP07814 1512 aaKnown RBP30.63■■■□□ 2.49
SEMA4D-218ENST00000482128 NPM1P06748 294 aaKnown RBP eCLIP30.62■■■□□ 2.49
SEMA4D-218ENST00000482128 KDM5BQ9UGL1 1544 aa30.61■■■□□ 2.49
SEMA4D-218ENST00000482128 APLP2Q06481 763 aa30.6■■■□□ 2.49
SEMA4D-218ENST00000482128 ARID3CA6NKF2 412 aa30.59■■■□□ 2.49
SEMA4D-218ENST00000482128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.58■■■□□ 2.49
SEMA4D-218ENST00000482128 HNRNPUL2Q1KMD3 747 aaKnown RBP30.58■■■□□ 2.49
SEMA4D-218ENST00000482128 ATP10BO94823 1461 aa30.57■■■□□ 2.48
SEMA4D-218ENST00000482128 CDK13Q14004 1512 aaKnown RBP30.54■■■□□ 2.48
SEMA4D-218ENST00000482128 ZCCHC11Q5TAX3 1644 aaKnown RBP30.53■■■□□ 2.48
SEMA4D-218ENST00000482128 MAP3K1Q13233 1512 aa30.52■■■□□ 2.48
SEMA4D-218ENST00000482128 CDK11AQ9UQ88 783 aaPredicted RBP30.51■■■□□ 2.47
SEMA4D-218ENST00000482128 LRRIQ1Q96JM4 1722 aa30.49■■■□□ 2.47
SEMA4D-218ENST00000482128 TIAM1Q13009 1591 aa30.49■■■□□ 2.47
SEMA4D-218ENST00000482128 CFAP43Q8NDM7 1665 aa30.47■■■□□ 2.47
SEMA4D-218ENST00000482128 PLEKHD1A6NEE1 506 aa30.44■■■□□ 2.46
SEMA4D-218ENST00000482128 MAPKBP1O60336 1514 aa30.41■■■□□ 2.46
SEMA4D-218ENST00000482128 ASXL2Q76L83 1435 aa30.39■■■□□ 2.46
SEMA4D-218ENST00000482128 MTUS2Q5JR59 1369 aa30.39■■■□□ 2.45
SEMA4D-218ENST00000482128 WDR7Q9Y4E6 1490 aa30.37■■■□□ 2.45
SEMA4D-218ENST00000482128 TROQ12816 1431 aaPredicted RBP30.36■■■□□ 2.45
SEMA4D-218ENST00000482128 LRRC9Q6ZRR7 1453 aa30.35■■■□□ 2.45
SEMA4D-218ENST00000482128 EHBP1L1Q8N3D4 1523 aa30.35■■■□□ 2.45
SEMA4D-218ENST00000482128 MAGI3Q5TCQ9 1506 aa30.31■■■□□ 2.44
SEMA4D-218ENST00000482128 KANK4Q5T7N3 995 aaPredicted RBP30.29■■■□□ 2.44
SEMA4D-218ENST00000482128 KCNH8Q96L42 1107 aa30.24■■■□□ 2.43
SEMA4D-218ENST00000482128 KIF14Q15058 1648 aa30.24■■■□□ 2.43
SEMA4D-218ENST00000482128 SUPT6HQ7KZ85 1726 aaKnown RBP30.19■■■□□ 2.42
SEMA4D-218ENST00000482128 ABCC10Q5T3U5 1492 aa30.18■■■□□ 2.42
SEMA4D-218ENST00000482128 PPARGC1BQ86YN6 1023 aaKnown RBP30.15■■■□□ 2.42
SEMA4D-218ENST00000482128 NCOA2Q15596 1464 aa30.14■■■□□ 2.42
SEMA4D-218ENST00000482128 DIP2BQ9P265 1576 aa30.13■■■□□ 2.41
SEMA4D-218ENST00000482128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.12■■■□□ 2.41
SEMA4D-218ENST00000482128 GLI2P10070 1586 aa30.11■■■□□ 2.41
SEMA4D-218ENST00000482128 FAM69CQ0P6D2 419 aa30.1■■■□□ 2.41
SEMA4D-218ENST00000482128 ABCA9Q8IUA7 1624 aa30.09■■■□□ 2.41
SEMA4D-218ENST00000482128 CCNB3Q8WWL7 1395 aa30.09■■■□□ 2.41
SEMA4D-218ENST00000482128 TTC37Q6PGP7 1564 aa30.07■■■□□ 2.4
SEMA4D-218ENST00000482128 CD109Q6YHK3 1445 aa30.01■■■□□ 2.39
SEMA4D-218ENST00000482128 PHLDB1Q86UU1 1377 aa30■■■□□ 2.39
SEMA4D-218ENST00000482128 MYOM3Q5VTT5 1437 aa29.99■■■□□ 2.39
SEMA4D-218ENST00000482128 TRHP20396 242 aaPredicted RBP29.99■■■□□ 2.39
SEMA4D-218ENST00000482128 GPATCH8Q9UKJ3 1502 aaKnown RBP29.99■■■□□ 2.39
SEMA4D-218ENST00000482128 MAP3K4Q9Y6R4 1608 aa29.98■■■□□ 2.39
SEMA4D-218ENST00000482128 ITSN2Q9NZM3 1697 aa29.98■■■□□ 2.39
SEMA4D-218ENST00000482128 PLCH2O75038 1416 aa29.97■■■□□ 2.39
SEMA4D-218ENST00000482128 MYO5CQ9NQX4 1742 aa29.97■■■□□ 2.39
SEMA4D-218ENST00000482128 KIF13AQ9H1H9 1805 aa29.96■■■□□ 2.39
SEMA4D-218ENST00000482128 ARAP3Q8WWN8 1544 aa29.96■■■□□ 2.39
SEMA4D-218ENST00000482128 PREX2Q70Z35 1606 aa29.95■■■□□ 2.38
SEMA4D-218ENST00000482128 CFDP1Q9UEE9 299 aaPredicted RBP29.93■■■□□ 2.38
SEMA4D-218ENST00000482128 CDC42BPAQ5VT25 1732 aa29.93■■■□□ 2.38
SEMA4D-218ENST00000482128 ARHGAP5Q13017 1502 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms