RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 PEG3Q9GZU2 1588 aa14.01□□□□□ -0.17
LINC00888-203ENST00000482098 TSHZ2Q9NRE2 1034 aa13.99□□□□□ -0.17
LINC00888-203ENST00000482098 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
LINC00888-203ENST00000482098 ZBTB12Q9Y330 459 aaPredicted RBP13.99□□□□□ -0.17
LINC00888-203ENST00000482098 BAZ1AQ9NRL2 1556 aaPredicted RBP13.98□□□□□ -0.17
LINC00888-203ENST00000482098 RGL2O15211 777 aa13.97□□□□□ -0.17
LINC00888-203ENST00000482098 NBR1Q14596 966 aa13.96□□□□□ -0.17
LINC00888-203ENST00000482098 OSCARQ8IYS5 282 aa13.96□□□□□ -0.17
LINC00888-203ENST00000482098 CADPSQ9ULU8 1353 aa13.95□□□□□ -0.18
LINC00888-203ENST00000482098 MRC2Q9UBG0 1479 aa13.94□□□□□ -0.18
LINC00888-203ENST00000482098 PLCD3Q8N3E9 789 aa13.94□□□□□ -0.18
LINC00888-203ENST00000482098 KIF21AQ7Z4S6 1674 aa13.93□□□□□ -0.18
LINC00888-203ENST00000482098 WDR62O43379 1518 aa13.92□□□□□ -0.18
LINC00888-203ENST00000482098 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.18
LINC00888-203ENST00000482098 CHGAP10645 457 aaKnown RBP13.88□□□□□ -0.19
LINC00888-203ENST00000482098 CAPN15O75808 1086 aa13.86□□□□□ -0.19
LINC00888-203ENST00000482098 MIER1Q8N108 512 aa13.82□□□□□ -0.2
LINC00888-203ENST00000482098 CIZ1Q9ULV3 898 aaPredicted RBP13.8□□□□□ -0.2
LINC00888-203ENST00000482098 CEP164Q9UPV0 1460 aa13.79□□□□□ -0.2
LINC00888-203ENST00000482098 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
LINC00888-203ENST00000482098 MROH2BQ7Z745 1585 aa13.78□□□□□ -0.2
LINC00888-203ENST00000482098 ERICH6Q7L0X2 663 aa13.75□□□□□ -0.21
LINC00888-203ENST00000482098 ZBTB47Q9UFB7 747 aaPredicted RBP13.75□□□□□ -0.21
LINC00888-203ENST00000482098 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
LINC00888-203ENST00000482098 TULP1O00294 542 aaPredicted RBP13.73□□□□□ -0.21
LINC00888-203ENST00000482098 TIMELESSQ9UNS1 1208 aa13.73□□□□□ -0.21
LINC00888-203ENST00000482098 FANCD2Q9BXW9 1451 aa13.73□□□□□ -0.21
LINC00888-203ENST00000482098 GTF3C3Q9Y5Q9 886 aa13.7□□□□□ -0.22
LINC00888-203ENST00000482098 RIMBP3CA6NJZ7 1639 aa13.69□□□□□ -0.22
LINC00888-203ENST00000482098 RIMBP3BA6NNM3 1639 aa13.69□□□□□ -0.22
LINC00888-203ENST00000482098 RIMBP3Q9UFD9 1639 aa13.69□□□□□ -0.22
LINC00888-203ENST00000482098 HS6ST3Q8IZP7 471 aa13.69□□□□□ -0.22
LINC00888-203ENST00000482098 CFTRP13569 1480 aa13.67□□□□□ -0.22
LINC00888-203ENST00000482098 ARHGEF11O15085 1522 aa13.66□□□□□ -0.22
LINC00888-203ENST00000482098 SPDYE2BA6NHP3 402 aa13.66□□□□□ -0.22
LINC00888-203ENST00000482098 ABCB7O75027 752 aa13.66□□□□□ -0.22
LINC00888-203ENST00000482098 SPDYE6P0CI01 402 aa13.66□□□□□ -0.22
LINC00888-203ENST00000482098 SPDYE2Q495Y8 402 aa13.66□□□□□ -0.22
LINC00888-203ENST00000482098 SSUH2Q9Y2M2 353 aa13.62□□□□□ -0.23
LINC00888-203ENST00000482098 URB2Q14146 1524 aaKnown RBP13.61□□□□□ -0.23
LINC00888-203ENST00000482098 CYB5RLQ6IPT4 315 aa13.6□□□□□ -0.23
LINC00888-203ENST00000482098 ARXQ96QS3 562 aa13.59□□□□□ -0.23
LINC00888-203ENST00000482098 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
LINC00888-203ENST00000482098 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
LINC00888-203ENST00000482098 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
LINC00888-203ENST00000482098 WIZO95785 1651 aa13.52□□□□□ -0.25
LINC00888-203ENST00000482098 ZNF608Q9ULD9 1512 aaPredicted RBP13.51□□□□□ -0.25
LINC00888-203ENST00000482098 GSE1Q14687 1217 aa13.51□□□□□ -0.25
LINC00888-203ENST00000482098 TMEM132AQ24JP5 1023 aa13.51□□□□□ -0.25
LINC00888-203ENST00000482098 RSF1Q96T23 1441 aaPredicted RBP13.5□□□□□ -0.25
LINC00888-203ENST00000482098 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
LINC00888-203ENST00000482098 DAXXQ9UER7 740 aaPredicted RBP13.46□□□□□ -0.25
LINC00888-203ENST00000482098 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
LINC00888-203ENST00000482098 RNF25Q96BH1 459 aaPredicted RBP13.44□□□□□ -0.26
LINC00888-203ENST00000482098 GTPBP6O43824 516 aaPredicted RBP13.43□□□□□ -0.26
LINC00888-203ENST00000482098 RIOK3O14730 519 aaKnown RBP13.42□□□□□ -0.26
LINC00888-203ENST00000482098 NKX1-1Q15270 411 aaPredicted RBP13.42□□□□□ -0.26
LINC00888-203ENST00000482098 TOP2AP11388 1531 aaKnown RBP13.41□□□□□ -0.26
LINC00888-203ENST00000482098 TOPBP1Q92547 1522 aa13.4□□□□□ -0.26
LINC00888-203ENST00000482098 EIF4G3O43432 1585 aaKnown RBP13.38□□□□□ -0.27
LINC00888-203ENST00000482098 RYDENQ9NUL5 291 aaKnown RBP13.37□□□□□ -0.27
LINC00888-203ENST00000482098 STK25O00506 426 aa13.36□□□□□ -0.27
LINC00888-203ENST00000482098 AQRO60306 1485 aaKnown RBP eCLIP13.35□□□□□ -0.275e-6■■□□□ 14.3
LINC00888-203ENST00000482098 C14orf37Q86TY3 774 aa13.34□□□□□ -0.27
LINC00888-203ENST00000482098 PRDM2Q13029 1718 aa13.33□□□□□ -0.27
LINC00888-203ENST00000482098 DCAF8Q5TAQ9 597 aa13.33□□□□□ -0.28
LINC00888-203ENST00000482098 P3H3Q8IVL6 736 aa13.33□□□□□ -0.28
LINC00888-203ENST00000482098 VGFO15240 615 aaPredicted RBP13.32□□□□□ -0.28
LINC00888-203ENST00000482098 DSG3P32926 999 aa13.31□□□□□ -0.28
LINC00888-203ENST00000482098 HOMEZQ8IX15 550 aa13.31□□□□□ -0.28
LINC00888-203ENST00000482098 DNMBPQ6XZF7 1577 aa13.31□□□□□ -0.28
LINC00888-203ENST00000482098 CHD1O14646 1710 aa13.3□□□□□ -0.28
LINC00888-203ENST00000482098 TARBP1Q13395 1621 aaKnown RBP13.3□□□□□ -0.28
LINC00888-203ENST00000482098 NUBP1P53384 320 aa13.28□□□□□ -0.28
LINC00888-203ENST00000482098 CCDC88BA6NC98 1476 aa13.27□□□□□ -0.29
LINC00888-203ENST00000482098 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.29
LINC00888-203ENST00000482098 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
LINC00888-203ENST00000482098 CHMP7Q8WUX9 453 aaPredicted RBP13.23□□□□□ -0.29
LINC00888-203ENST00000482098 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
LINC00888-203ENST00000482098 WDR97A6NE52 1622 aa13.22□□□□□ -0.29
LINC00888-203ENST00000482098 SYNJ1O43426 1573 aa13.22□□□□□ -0.29
LINC00888-203ENST00000482098 STK24Q9Y6E0 443 aa13.21□□□□□ -0.29
LINC00888-203ENST00000482098 MAGI1Q96QZ7 1491 aaPredicted RBP13.21□□□□□ -0.3
LINC00888-203ENST00000482098 SGIP1Q9BQI5 828 aa13.2□□□□□ -0.3
LINC00888-203ENST00000482098 SOGA1O94964 1423 aa13.2□□□□□ -0.3
LINC00888-203ENST00000482098 TDRD9Q8NDG6 1382 aaKnown RBP13.2□□□□□ -0.3
LINC00888-203ENST00000482098 SNAPC4Q5SXM2 1469 aa13.18□□□□□ -0.3
LINC00888-203ENST00000482098 BCL11BQ9C0K0 894 aaPredicted RBP13.18□□□□□ -0.3
LINC00888-203ENST00000482098 WDR70Q9NW82 654 aa13.18□□□□□ -0.3
LINC00888-203ENST00000482098 GAPVD1Q14C86 1478 aa13.17□□□□□ -0.3
LINC00888-203ENST00000482098 CHRM1P11229 460 aaPredicted RBP13.17□□□□□ -0.3
LINC00888-203ENST00000482098 LMOD2Q6P5Q4 547 aa13.17□□□□□ -0.3
LINC00888-203ENST00000482098 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
LINC00888-203ENST00000482098 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
LINC00888-203ENST00000482098 GRIN2BQ13224 1484 aa13.15□□□□□ -0.3
LINC00888-203ENST00000482098 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC00888-203ENST00000482098 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.13□□□□□ -0.31
LINC00888-203ENST00000482098 ZFP91Q96JP5 570 aaPredicted RBP13.13□□□□□ -0.31
LINC00888-203ENST00000482098 KCNV2Q8TDN2 545 aa13.07□□□□□ -0.32
LINC00888-203ENST00000482098 FGD5Q6ZNL6 1462 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms