RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 CTTNBP2Q8WZ74 1663 aa33.89■■■■□ 3.02
VPS16-207ENST00000481812 IQGAP2Q13576 1575 aa33.8■■■■□ 3
VPS16-207ENST00000481812 UBTFP17480 764 aaKnown RBP33.76■■■□□ 2.99
VPS16-207ENST00000481812 SHROOM2Q13796 1616 aa33.75■■■□□ 2.99
VPS16-207ENST00000481812 JPH4Q96JJ6 628 aa33.7■■■□□ 2.99
VPS16-207ENST00000481812 EHMT2Q96KQ7 1210 aa33.7■■■□□ 2.99
VPS16-207ENST00000481812 TNIKQ9UKE5 1360 aa33.69■■■□□ 2.98
VPS16-207ENST00000481812 UGGT2Q9NYU1 1516 aa33.66■■■□□ 2.98
VPS16-207ENST00000481812 LOC105371045A0A1W2PR82 267 aa33.64■■■□□ 2.98
VPS16-207ENST00000481812 PRG4Q92954 1404 aaPredicted RBP33.56■■■□□ 2.96
VPS16-207ENST00000481812 DNAJC5Q9H3Z4 198 aa33.53■■■□□ 2.96
VPS16-207ENST00000481812 CARMIL2Q6F5E8 1435 aa33.52■■■□□ 2.96
VPS16-207ENST00000481812 DISP1Q96F81 1524 aa33.5■■■□□ 2.95
VPS16-207ENST00000481812 ARHGEF11O15085 1522 aa33.48■■■□□ 2.95
VPS16-207ENST00000481812 SAMD9Q5K651 1589 aa33.47■■■□□ 2.95
VPS16-207ENST00000481812 EFCAB5A4FU69 1503 aa33.47■■■□□ 2.95
VPS16-207ENST00000481812 KIAA0556O60303 1618 aa33.46■■■□□ 2.95
VPS16-207ENST00000481812 ERCC6L2Q5T890 1561 aa33.45■■■□□ 2.95
VPS16-207ENST00000481812 RIMBP3CA6NJZ7 1639 aa33.42■■■□□ 2.94
VPS16-207ENST00000481812 RIMBP3BA6NNM3 1639 aa33.42■■■□□ 2.94
VPS16-207ENST00000481812 RIMBP3Q9UFD9 1639 aa33.42■■■□□ 2.94
VPS16-207ENST00000481812 CLIP1P30622 1438 aa33.36■■■□□ 2.93
VPS16-207ENST00000481812 CEP162Q5TB80 1403 aa33.36■■■□□ 2.93
VPS16-207ENST00000481812 ARHGAP35Q9NRY4 1499 aa33.35■■■□□ 2.93
VPS16-207ENST00000481812 RANGAP1P46060 587 aaPredicted RBP33.34■■■□□ 2.93
VPS16-207ENST00000481812 PTPRGP23470 1445 aa33.26■■■□□ 2.91
VPS16-207ENST00000481812 ARAP1Q96P48 1450 aa33.25■■■□□ 2.91
VPS16-207ENST00000481812 P3H3Q8IVL6 736 aa33.24■■■□□ 2.91
VPS16-207ENST00000481812 FHOD3Q2V2M9 1422 aa33.22■■■□□ 2.91
VPS16-207ENST00000481812 FMN1Q68DA7 1419 aa33.13■■■□□ 2.89
VPS16-207ENST00000481812 CYB5RLQ6IPT4 315 aa33.09■■■□□ 2.89
VPS16-207ENST00000481812 UACAQ9BZF9 1416 aa33.07■■■□□ 2.88
VPS16-207ENST00000481812 ABCA8O94911 1581 aa33.07■■■□□ 2.88
VPS16-207ENST00000481812 TTBK1Q5TCY1 1321 aaPredicted RBP33.06■■■□□ 2.88
VPS16-207ENST00000481812 UHRF1BP1LA0JNW5 1464 aa33.05■■■□□ 2.88
VPS16-207ENST00000481812 PLB1Q6P1J6 1458 aa33.02■■■□□ 2.88
VPS16-207ENST00000481812 RAPGEF6Q8TEU7 1601 aa33.01■■■□□ 2.87
VPS16-207ENST00000481812 ABCC2Q92887 1545 aa33.01■■■□□ 2.87
VPS16-207ENST00000481812 ADCY10Q96PN6 1610 aa32.97■■■□□ 2.87
VPS16-207ENST00000481812 VPS8Q8N3P4 1428 aa32.94■■■□□ 2.86
VPS16-207ENST00000481812 CASKIN1Q8WXD9 1431 aa32.94■■■□□ 2.86
VPS16-207ENST00000481812 FYCO1Q9BQS8 1478 aa32.9■■■□□ 2.86
VPS16-207ENST00000481812 HECW1Q76N89 1606 aa32.89■■■□□ 2.86
VPS16-207ENST00000481812 PCF11O94913 1555 aaKnown RBP32.89■■■□□ 2.86
VPS16-207ENST00000481812 NUP153P49790 1475 aaKnown RBP32.87■■■□□ 2.85
VPS16-207ENST00000481812 KDM5BQ9UGL1 1544 aa32.87■■■□□ 2.85
VPS16-207ENST00000481812 NPM1P06748 294 aaKnown RBP eCLIP32.79■■■□□ 2.84
VPS16-207ENST00000481812 ATP10BO94823 1461 aa32.79■■■□□ 2.84
VPS16-207ENST00000481812 ZCCHC11Q5TAX3 1644 aaKnown RBP32.78■■■□□ 2.84
VPS16-207ENST00000481812 EPRSP07814 1512 aaKnown RBP32.77■■■□□ 2.84
VPS16-207ENST00000481812 CCDC18Q5T9S5 1454 aa32.75■■■□□ 2.83
VPS16-207ENST00000481812 LRRIQ1Q96JM4 1722 aa32.75■■■□□ 2.83
VPS16-207ENST00000481812 ATP1B4Q9UN42 357 aaPredicted RBP32.74■■■□□ 2.83
VPS16-207ENST00000481812 MAPKBP1O60336 1514 aa32.68■■■□□ 2.82
VPS16-207ENST00000481812 CDK13Q14004 1512 aaKnown RBP32.67■■■□□ 2.82
VPS16-207ENST00000481812 MAP3K1Q13233 1512 aa32.66■■■□□ 2.82
VPS16-207ENST00000481812 ARID3CA6NKF2 412 aa32.63■■■□□ 2.81
VPS16-207ENST00000481812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.61■■■□□ 2.81
VPS16-207ENST00000481812 HNRNPUL2Q1KMD3 747 aaKnown RBP32.61■■■□□ 2.81
VPS16-207ENST00000481812 CFAP43Q8NDM7 1665 aa32.6■■■□□ 2.81
VPS16-207ENST00000481812 CDK11AQ9UQ88 783 aaPredicted RBP32.6■■■□□ 2.81
VPS16-207ENST00000481812 ASXL2Q76L83 1435 aa32.59■■■□□ 2.81
VPS16-207ENST00000481812 TIAM1Q13009 1591 aa32.58■■■□□ 2.81
VPS16-207ENST00000481812 PLEKHD1A6NEE1 506 aa32.56■■■□□ 2.8
VPS16-207ENST00000481812 WDR7Q9Y4E6 1490 aa32.54■■■□□ 2.8
VPS16-207ENST00000481812 APLP2Q06481 763 aa32.54■■■□□ 2.8
VPS16-207ENST00000481812 TROQ12816 1431 aaPredicted RBP32.49■■■□□ 2.79
VPS16-207ENST00000481812 MAGI3Q5TCQ9 1506 aa32.46■■■□□ 2.79
VPS16-207ENST00000481812 ABCC10Q5T3U5 1492 aa32.43■■■□□ 2.78
VPS16-207ENST00000481812 MTUS2Q5JR59 1369 aa32.43■■■□□ 2.78
VPS16-207ENST00000481812 LRRC9Q6ZRR7 1453 aa32.42■■■□□ 2.78
VPS16-207ENST00000481812 EHBP1L1Q8N3D4 1523 aa32.42■■■□□ 2.78
VPS16-207ENST00000481812 GLI2P10070 1586 aa32.39■■■□□ 2.78
VPS16-207ENST00000481812 DIP2BQ9P265 1576 aa32.38■■■□□ 2.77
VPS16-207ENST00000481812 KIF14Q15058 1648 aa32.36■■■□□ 2.77
VPS16-207ENST00000481812 KCNH8Q96L42 1107 aa32.35■■■□□ 2.77
VPS16-207ENST00000481812 KANK4Q5T7N3 995 aaPredicted RBP32.34■■■□□ 2.77
VPS16-207ENST00000481812 KIF13AQ9H1H9 1805 aa32.33■■■□□ 2.77
VPS16-207ENST00000481812 ABCA9Q8IUA7 1624 aa32.32■■■□□ 2.76
VPS16-207ENST00000481812 SUPT6HQ7KZ85 1726 aaKnown RBP32.3■■■□□ 2.76
VPS16-207ENST00000481812 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.29■■■□□ 2.76
VPS16-207ENST00000481812 FAM69CQ0P6D2 419 aa32.28■■■□□ 2.76
VPS16-207ENST00000481812 MAP3K4Q9Y6R4 1608 aa32.24■■■□□ 2.75
VPS16-207ENST00000481812 TTC37Q6PGP7 1564 aa32.22■■■□□ 2.75
VPS16-207ENST00000481812 NCOA2Q15596 1464 aa32.21■■■□□ 2.75
VPS16-207ENST00000481812 CD109Q6YHK3 1445 aa32.17■■■□□ 2.74
VPS16-207ENST00000481812 TRHP20396 242 aaPredicted RBP32.17■■■□□ 2.74
VPS16-207ENST00000481812 MYO5CQ9NQX4 1742 aa32.16■■■□□ 2.74
VPS16-207ENST00000481812 ARAP3Q8WWN8 1544 aa32.14■■■□□ 2.74
VPS16-207ENST00000481812 CDC42BPAQ5VT25 1732 aa32.13■■■□□ 2.73
VPS16-207ENST00000481812 PLCH2O75038 1416 aa32.12■■■□□ 2.73
VPS16-207ENST00000481812 CCNB3Q8WWL7 1395 aa32.12■■■□□ 2.73
VPS16-207ENST00000481812 GPATCH8Q9UKJ3 1502 aaKnown RBP32.1■■■□□ 2.73
VPS16-207ENST00000481812 ITSN2Q9NZM3 1697 aa32.1■■■□□ 2.73
VPS16-207ENST00000481812 PREX2Q70Z35 1606 aa32.1■■■□□ 2.73
VPS16-207ENST00000481812 CDC42BPBQ9Y5S2 1711 aa32.08■■■□□ 2.73
VPS16-207ENST00000481812 PPRC1Q5VV67 1664 aaKnown RBP32.07■■■□□ 2.72
VPS16-207ENST00000481812 TSPOAP1O95153 1857 aa32.06■■■□□ 2.72
VPS16-207ENST00000481812 PPARGC1BQ86YN6 1023 aaKnown RBP32.04■■■□□ 2.72
VPS16-207ENST00000481812 TEX14Q8IWB6 1497 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms