RNA–Protein interactions for RNA: ENST00000481603.1

TRIM6-207, Transcript of tripartite motif containing 6, humanhuman

TSL 2

Gene TRIM6, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-207ENST00000481603 CSRNP3Q8WYN3 585 aa10.11□□□□□ -0.79
TRIM6-207ENST00000481603 SNAPC4Q5SXM2 1469 aa10.1□□□□□ -0.79
TRIM6-207ENST00000481603 RAD54L2Q9Y4B4 1467 aa10.08□□□□□ -0.8
TRIM6-207ENST00000481603 PRKCSHP14314 528 aaPredicted RBP10.08□□□□□ -0.8
TRIM6-207ENST00000481603 GRIN2BQ13224 1484 aa10.08□□□□□ -0.8
TRIM6-207ENST00000481603 SYNJ2O15056 1496 aa10.07□□□□□ -0.8
TRIM6-207ENST00000481603 FGD5Q6ZNL6 1462 aa10.07□□□□□ -0.8
TRIM6-207ENST00000481603 TRHP20396 242 aaPredicted RBP10.06□□□□□ -0.8
TRIM6-207ENST00000481603 TDRD9Q8NDG6 1382 aaKnown RBP10.05□□□□□ -0.8
TRIM6-207ENST00000481603 CUX1P39880 1505 aa10.04□□□□□ -0.8
TRIM6-207ENST00000481603 UBTFP17480 764 aaKnown RBP10.04□□□□□ -0.8
TRIM6-207ENST00000481603 PBRM1Q86U86 1689 aa10.04□□□□□ -0.8
TRIM6-207ENST00000481603 FBLN2P98095 1184 aa10.04□□□□□ -0.8
TRIM6-207ENST00000481603 ABCA5Q8WWZ7 1642 aa10.01□□□□□ -0.81
TRIM6-207ENST00000481603 CHMP7Q8WUX9 453 aaPredicted RBP10.01□□□□□ -0.81
TRIM6-207ENST00000481603 RAPGEF2Q9Y4G8 1499 aa10□□□□□ -0.81
TRIM6-207ENST00000481603 GAPVD1Q14C86 1478 aa10□□□□□ -0.81
TRIM6-207ENST00000481603 ABCA10Q8WWZ4 1543 aa10□□□□□ -0.81
TRIM6-207ENST00000481603 CACNB1Q02641 598 aaPredicted RBP9.99□□□□□ -0.81
TRIM6-207ENST00000481603 CLIP1P30622 1438 aa9.98□□□□□ -0.81
TRIM6-207ENST00000481603 ERICH3Q5RHP9 1530 aa9.98□□□□□ -0.81
TRIM6-207ENST00000481603 PLPPR3Q6T4P5 718 aa9.98□□□□□ -0.81
TRIM6-207ENST00000481603 ERICH6Q7L0X2 663 aa9.96□□□□□ -0.81
TRIM6-207ENST00000481603 VPS8Q8N3P4 1428 aa9.96□□□□□ -0.82
TRIM6-207ENST00000481603 APLP2Q06481 763 aa9.95□□□□□ -0.82
TRIM6-207ENST00000481603 SHROOM2Q13796 1616 aa9.95□□□□□ -0.82
TRIM6-207ENST00000481603 ADAMTS12P58397 1594 aa9.94□□□□□ -0.82
TRIM6-207ENST00000481603 NUP160Q12769 1436 aa9.94□□□□□ -0.82
TRIM6-207ENST00000481603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.94□□□□□ -0.82
TRIM6-207ENST00000481603 GRIN2AQ12879 1464 aa9.93□□□□□ -0.82
TRIM6-207ENST00000481603 PRXQ9BXM0 1461 aa9.93□□□□□ -0.82
TRIM6-207ENST00000481603 CEP170Q5SW79 1584 aa9.92□□□□□ -0.82
TRIM6-207ENST00000481603 CCER1Q8TC90 406 aaPredicted RBP9.92□□□□□ -0.82
TRIM6-207ENST00000481603 KIF27Q86VH2 1401 aa9.9□□□□□ -0.83
TRIM6-207ENST00000481603 POTEHQ6S545 545 aa9.89□□□□□ -0.83
TRIM6-207ENST00000481603 ERCC6L2Q5T890 1561 aa9.89□□□□□ -0.83
TRIM6-207ENST00000481603 FHAD1B1AJZ9 1412 aa9.89□□□□□ -0.83
TRIM6-207ENST00000481603 KIF13AQ9H1H9 1805 aa9.86□□□□□ -0.83
TRIM6-207ENST00000481603 SCAF1Q9H7N4 1312 aaKnown RBP9.84□□□□□ -0.83
TRIM6-207ENST00000481603 NCBP3Q53F19 620 aaKnown RBP9.82□□□□□ -0.84
TRIM6-207ENST00000481603 BCL11AQ9H165 835 aa9.82□□□□□ -0.84
TRIM6-207ENST00000481603 MAPKBP1O60336 1514 aa9.82□□□□□ -0.84
TRIM6-207ENST00000481603 RANGAP1P46060 587 aaPredicted RBP9.81□□□□□ -0.84
TRIM6-207ENST00000481603 ABCC10Q5T3U5 1492 aa9.79□□□□□ -0.84
TRIM6-207ENST00000481603 ARHGAP35Q9NRY4 1499 aa9.79□□□□□ -0.84
TRIM6-207ENST00000481603 PRG4Q92954 1404 aaPredicted RBP9.79□□□□□ -0.84
TRIM6-207ENST00000481603 DIP2BQ9P265 1576 aa9.77□□□□□ -0.85
TRIM6-207ENST00000481603 HNRNPUL2Q1KMD3 747 aaKnown RBP9.75□□□□□ -0.85
TRIM6-207ENST00000481603 IGF1RP08069 1367 aa9.74□□□□□ -0.85
TRIM6-207ENST00000481603 JPH4Q96JJ6 628 aa9.74□□□□□ -0.85
TRIM6-207ENST00000481603 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
TRIM6-207ENST00000481603 ADCY10Q96PN6 1610 aa9.74□□□□□ -0.85
TRIM6-207ENST00000481603 CUL7Q14999 1698 aa9.72□□□□□ -0.85
TRIM6-207ENST00000481603 KIAA0586Q9BVV6 1533 aa9.72□□□□□ -0.85
TRIM6-207ENST00000481603 RRBP1Q9P2E9 1410 aaKnown RBP9.72□□□□□ -0.85
TRIM6-207ENST00000481603 CARMIL1Q5VZK9 1371 aa9.72□□□□□ -0.85
TRIM6-207ENST00000481603 CTTNBP2Q8WZ74 1663 aa9.71□□□□□ -0.85
TRIM6-207ENST00000481603 CFAP43Q8NDM7 1665 aa9.71□□□□□ -0.86
TRIM6-207ENST00000481603 KDM6BO15054 1643 aa9.71□□□□□ -0.86
TRIM6-207ENST00000481603 TIAM1Q13009 1591 aa9.71□□□□□ -0.86
TRIM6-207ENST00000481603 NPM1P06748 294 aaKnown RBP eCLIP9.7□□□□□ -0.86
TRIM6-207ENST00000481603 KANK4Q5T7N3 995 aaPredicted RBP9.7□□□□□ -0.86
TRIM6-207ENST00000481603 MAP3K1Q13233 1512 aa9.69□□□□□ -0.86
TRIM6-207ENST00000481603 FAM69CQ0P6D2 419 aa9.69□□□□□ -0.86
TRIM6-207ENST00000481603 DIEXFQ68CQ4 756 aaKnown RBP9.68□□□□□ -0.86
TRIM6-207ENST00000481603 PCF11O94913 1555 aaKnown RBP9.68□□□□□ -0.86
TRIM6-207ENST00000481603 GLI2P10070 1586 aa9.68□□□□□ -0.86
TRIM6-207ENST00000481603 EFCAB5A4FU69 1503 aa9.66□□□□□ -0.86
TRIM6-207ENST00000481603 CCNB3Q8WWL7 1395 aa9.65□□□□□ -0.86
TRIM6-207ENST00000481603 UHRF1BP1LA0JNW5 1464 aa9.65□□□□□ -0.87
TRIM6-207ENST00000481603 ZNF316A6NFI3 1004 aaPredicted RBP9.64□□□□□ -0.87
TRIM6-207ENST00000481603 DHX57Q6P158 1386 aaKnown RBP9.63□□□□□ -0.87
TRIM6-207ENST00000481603 ABCC2Q92887 1545 aa9.63□□□□□ -0.87
TRIM6-207ENST00000481603 PLB1Q6P1J6 1458 aa9.63□□□□□ -0.87
TRIM6-207ENST00000481603 LRRC9Q6ZRR7 1453 aa9.63□□□□□ -0.87
TRIM6-207ENST00000481603 CLSPNQ9HAW4 1339 aa9.63□□□□□ -0.87
TRIM6-207ENST00000481603 PPRC1Q5VV67 1664 aaKnown RBP9.63□□□□□ -0.87
TRIM6-207ENST00000481603 KDM4FA0A1W2PPD8 638 aa9.62□□□□□ -0.87
TRIM6-207ENST00000481603 PTPRGP23470 1445 aa9.61□□□□□ -0.87
TRIM6-207ENST00000481603 CARMIL2Q6F5E8 1435 aa9.61□□□□□ -0.87
TRIM6-207ENST00000481603 FYCO1Q9BQS8 1478 aa9.61□□□□□ -0.87
TRIM6-207ENST00000481603 TSPOAP1O95153 1857 aa9.61□□□□□ -0.87
TRIM6-207ENST00000481603 FHOD3Q2V2M9 1422 aa9.6□□□□□ -0.87
TRIM6-207ENST00000481603 IQGAP2Q13576 1575 aa9.59□□□□□ -0.87
TRIM6-207ENST00000481603 MAP3K4Q9Y6R4 1608 aa9.59□□□□□ -0.87
TRIM6-207ENST00000481603 SAMD9Q5K651 1589 aa9.59□□□□□ -0.87
TRIM6-207ENST00000481603 ASXL2Q76L83 1435 aa9.58□□□□□ -0.88
TRIM6-207ENST00000481603 CASKIN1Q8WXD9 1431 aa9.57□□□□□ -0.88
TRIM6-207ENST00000481603 KDM5BQ9UGL1 1544 aa9.57□□□□□ -0.88
TRIM6-207ENST00000481603 TEX14Q8IWB6 1497 aa9.57□□□□□ -0.88
TRIM6-207ENST00000481603 LRRIQ1Q96JM4 1722 aa9.56□□□□□ -0.88
TRIM6-207ENST00000481603 PHLDB1Q86UU1 1377 aa9.56□□□□□ -0.88
TRIM6-207ENST00000481603 CENPBP07199 599 aaPredicted RBP9.56□□□□□ -0.88
TRIM6-207ENST00000481603 UACAQ9BZF9 1416 aa9.56□□□□□ -0.88
TRIM6-207ENST00000481603 UGGT2Q9NYU1 1516 aa9.56□□□□□ -0.88
TRIM6-207ENST00000481603 ADGRL1O94910 1474 aa9.56□□□□□ -0.88
TRIM6-207ENST00000481603 ACIN1Q9UKV3 1341 aaKnown RBP9.55□□□□□ -0.88
TRIM6-207ENST00000481603 EPRSP07814 1512 aaKnown RBP9.55□□□□□ -0.88
TRIM6-207ENST00000481603 FMN1Q68DA7 1419 aa9.55□□□□□ -0.88
TRIM6-207ENST00000481603 DISP1Q96F81 1524 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms