RNA–Protein interactions for RNA: ENST00000481515.1

SIMC1-207, Transcript of SUMO interacting motifs containing 1, humanhuman

TSL 3

Gene SIMC1, Length 896 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-207ENST00000481515 RANGAP1P46060 587 aaPredicted RBP13.4□□□□□ -0.26
SIMC1-207ENST00000481515 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
SIMC1-207ENST00000481515 HRCP23327 699 aa13.37□□□□□ -0.27
SIMC1-207ENST00000481515 MAPK8IP2Q13387 824 aaPredicted RBP13.36□□□□□ -0.27
SIMC1-207ENST00000481515 PPARGC1BQ86YN6 1023 aaKnown RBP13.35□□□□□ -0.27
SIMC1-207ENST00000481515 GRIN2BQ13224 1484 aa13.35□□□□□ -0.27
SIMC1-207ENST00000481515 FHAD1B1AJZ9 1412 aa13.34□□□□□ -0.27
SIMC1-207ENST00000481515 ZEB1P37275 1124 aaPredicted RBP13.34□□□□□ -0.27
SIMC1-207ENST00000481515 ARAP1Q96P48 1450 aa13.34□□□□□ -0.27
SIMC1-207ENST00000481515 EFCAB5A4FU69 1503 aa13.34□□□□□ -0.27
SIMC1-207ENST00000481515 ARHGAP35Q9NRY4 1499 aa13.33□□□□□ -0.28
SIMC1-207ENST00000481515 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
SIMC1-207ENST00000481515 DMRT2Q9Y5R5 561 aa13.29□□□□□ -0.28
SIMC1-207ENST00000481515 AQRO60306 1485 aaKnown RBP eCLIP13.29□□□□□ -0.28
SIMC1-207ENST00000481515 THOC2Q8NI27 1593 aaKnown RBP13.28□□□□□ -0.28
SIMC1-207ENST00000481515 PBRM1Q86U86 1689 aa13.28□□□□□ -0.28
SIMC1-207ENST00000481515 CTTNBP2Q8WZ74 1663 aa13.28□□□□□ -0.28
SIMC1-207ENST00000481515 MAP3K1Q13233 1512 aa13.27□□□□□ -0.29
SIMC1-207ENST00000481515 FMN1Q68DA7 1419 aa13.25□□□□□ -0.29
SIMC1-207ENST00000481515 ADAMTS12P58397 1594 aa13.24□□□□□ -0.29
SIMC1-207ENST00000481515 TTBK1Q5TCY1 1321 aaPredicted RBP13.23□□□□□ -0.29
SIMC1-207ENST00000481515 MAGI1Q96QZ7 1491 aaPredicted RBP13.23□□□□□ -0.29
SIMC1-207ENST00000481515 ZNF608Q9ULD9 1512 aaPredicted RBP13.21□□□□□ -0.29
SIMC1-207ENST00000481515 FYCO1Q9BQS8 1478 aa13.19□□□□□ -0.3
SIMC1-207ENST00000481515 CASKIN1Q8WXD9 1431 aa13.19□□□□□ -0.3
SIMC1-207ENST00000481515 EIF4G3O43432 1585 aaKnown RBP13.19□□□□□ -0.3
SIMC1-207ENST00000481515 P3H3Q8IVL6 736 aa13.18□□□□□ -0.3
SIMC1-207ENST00000481515 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
SIMC1-207ENST00000481515 SNAPC4Q5SXM2 1469 aa13.17□□□□□ -0.3
SIMC1-207ENST00000481515 IQGAP2Q13576 1575 aa13.17□□□□□ -0.3
SIMC1-207ENST00000481515 SAMD9Q5K651 1589 aa13.16□□□□□ -0.3
SIMC1-207ENST00000481515 FHOD3Q2V2M9 1422 aa13.16□□□□□ -0.3
SIMC1-207ENST00000481515 KIAA0586Q9BVV6 1533 aa13.16□□□□□ -0.3
SIMC1-207ENST00000481515 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
SIMC1-207ENST00000481515 ATP1B4Q9UN42 357 aaPredicted RBP13.15□□□□□ -0.3
SIMC1-207ENST00000481515 GRIN2AQ12879 1464 aa13.15□□□□□ -0.3
SIMC1-207ENST00000481515 TIAM1Q13009 1591 aa13.14□□□□□ -0.31
SIMC1-207ENST00000481515 KANK4Q5T7N3 995 aaPredicted RBP13.12□□□□□ -0.31
SIMC1-207ENST00000481515 CCER1Q8TC90 406 aaPredicted RBP13.12□□□□□ -0.31
SIMC1-207ENST00000481515 UGGT2Q9NYU1 1516 aa13.12□□□□□ -0.31
SIMC1-207ENST00000481515 LRRC9Q6ZRR7 1453 aa13.11□□□□□ -0.31
SIMC1-207ENST00000481515 PCF11O94913 1555 aaKnown RBP13.1□□□□□ -0.31
SIMC1-207ENST00000481515 RRBP1Q9P2E9 1410 aaKnown RBP13.09□□□□□ -0.31
SIMC1-207ENST00000481515 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.31
SIMC1-207ENST00000481515 FBLN2P98095 1184 aa13.08□□□□□ -0.32
SIMC1-207ENST00000481515 CCDC18Q5T9S5 1454 aa13.08□□□□□ -0.32
SIMC1-207ENST00000481515 CARMIL2Q6F5E8 1435 aa13.07□□□□□ -0.32
SIMC1-207ENST00000481515 CCNB3Q8WWL7 1395 aa13.07□□□□□ -0.32
SIMC1-207ENST00000481515 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
SIMC1-207ENST00000481515 MTUS2Q5JR59 1369 aa13.05□□□□□ -0.32
SIMC1-207ENST00000481515 NUP160Q12769 1436 aa13.05□□□□□ -0.32
SIMC1-207ENST00000481515 HECW1Q76N89 1606 aa13.02□□□□□ -0.32
SIMC1-207ENST00000481515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
SIMC1-207ENST00000481515 CDK11AQ9UQ88 783 aaPredicted RBP13.02□□□□□ -0.33
SIMC1-207ENST00000481515 CNKSR2Q8WXI2 1034 aa13.01□□□□□ -0.33
SIMC1-207ENST00000481515 JPH4Q96JJ6 628 aa13.01□□□□□ -0.33
SIMC1-207ENST00000481515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.01□□□□□ -0.33
SIMC1-207ENST00000481515 KIAA0556O60303 1618 aa12.99□□□□□ -0.33
SIMC1-207ENST00000481515 CEP170Q5SW79 1584 aa12.98□□□□□ -0.33
SIMC1-207ENST00000481515 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
SIMC1-207ENST00000481515 DISP1Q96F81 1524 aa12.98□□□□□ -0.33
SIMC1-207ENST00000481515 CLSPNQ9HAW4 1339 aa12.96□□□□□ -0.33
SIMC1-207ENST00000481515 EPRSP07814 1512 aaKnown RBP12.95□□□□□ -0.34
SIMC1-207ENST00000481515 PHLDB1Q86UU1 1377 aa12.94□□□□□ -0.34
SIMC1-207ENST00000481515 FAM50AQ14320 339 aaKnown RBP12.94□□□□□ -0.34
SIMC1-207ENST00000481515 SUPT6HQ7KZ85 1726 aaKnown RBP12.93□□□□□ -0.34
SIMC1-207ENST00000481515 RAPGEF6Q8TEU7 1601 aa12.91□□□□□ -0.34
SIMC1-207ENST00000481515 HOXD11P31277 338 aaPredicted RBP12.91□□□□□ -0.34
SIMC1-207ENST00000481515 NCOA2Q15596 1464 aa12.91□□□□□ -0.34
SIMC1-207ENST00000481515 MYOM3Q5VTT5 1437 aa12.9□□□□□ -0.34
SIMC1-207ENST00000481515 FGD6Q6ZV73 1430 aa12.9□□□□□ -0.34
SIMC1-207ENST00000481515 ITGAEP38570 1179 aa12.89□□□□□ -0.35
SIMC1-207ENST00000481515 ACIN1Q9UKV3 1341 aaKnown RBP12.88□□□□□ -0.35
SIMC1-207ENST00000481515 MIA2Q96PC5 1412 aa12.88□□□□□ -0.35
SIMC1-207ENST00000481515 PRG4Q92954 1404 aaPredicted RBP12.87□□□□□ -0.35
SIMC1-207ENST00000481515 SETD5Q9C0A6 1442 aa12.87□□□□□ -0.35
SIMC1-207ENST00000481515 NUP153P49790 1475 aaKnown RBP12.86□□□□□ -0.35
SIMC1-207ENST00000481515 PTPRGP23470 1445 aa12.86□□□□□ -0.35
SIMC1-207ENST00000481515 LRRIQ1Q96JM4 1722 aa12.85□□□□□ -0.35
SIMC1-207ENST00000481515 ARHGEF11O15085 1522 aa12.85□□□□□ -0.35
SIMC1-207ENST00000481515 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
SIMC1-207ENST00000481515 CHD1O14646 1710 aa12.85□□□□□ -0.35
SIMC1-207ENST00000481515 PLEKHD1A6NEE1 506 aa12.84□□□□□ -0.35
SIMC1-207ENST00000481515 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
SIMC1-207ENST00000481515 CDK13Q14004 1512 aaKnown RBP12.83□□□□□ -0.36
SIMC1-207ENST00000481515 TROQ12816 1431 aaPredicted RBP12.82□□□□□ -0.36
SIMC1-207ENST00000481515 PLB1Q6P1J6 1458 aa12.81□□□□□ -0.36
SIMC1-207ENST00000481515 ABCA8O94911 1581 aa12.81□□□□□ -0.36
SIMC1-207ENST00000481515 RAB3GAP2Q9H2M9 1393 aa12.81□□□□□ -0.36
SIMC1-207ENST00000481515 SHROOM2Q13796 1616 aa12.8□□□□□ -0.36
SIMC1-207ENST00000481515 TCOF1Q13428 1488 aaKnown RBP12.8□□□□□ -0.36
SIMC1-207ENST00000481515 MAGI3Q5TCQ9 1506 aa12.8□□□□□ -0.36
SIMC1-207ENST00000481515 PTPN23Q9H3S7 1636 aa12.8□□□□□ -0.36
SIMC1-207ENST00000481515 DHX57Q6P158 1386 aaKnown RBP12.8□□□□□ -0.36
SIMC1-207ENST00000481515 ARID3CA6NKF2 412 aa12.78□□□□□ -0.36
SIMC1-207ENST00000481515 UACAQ9BZF9 1416 aa12.77□□□□□ -0.37
SIMC1-207ENST00000481515 HFM1A2PYH4 1435 aa12.75□□□□□ -0.37
SIMC1-207ENST00000481515 ATP10BO94823 1461 aa12.75□□□□□ -0.37
SIMC1-207ENST00000481515 CLASP1Q7Z460 1538 aa12.75□□□□□ -0.37
SIMC1-207ENST00000481515 ADCY10Q96PN6 1610 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms