RNA–Protein interactions for RNA: ENST00000481475.1

TNC-207, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-207ENST00000481475 CSRNP3Q8WYN3 585 aa12.85□□□□□ -0.35
TNC-207ENST00000481475 DNMBPQ6XZF7 1577 aa12.82□□□□□ -0.36
TNC-207ENST00000481475 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
TNC-207ENST00000481475 CERKQ8TCT0 537 aa12.8□□□□□ -0.36
TNC-207ENST00000481475 TDRD9Q8NDG6 1382 aaKnown RBP12.8□□□□□ -0.36
TNC-207ENST00000481475 CEP170Q5SW79 1584 aa12.79□□□□□ -0.36
TNC-207ENST00000481475 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
TNC-207ENST00000481475 TOP2BQ02880 1626 aa12.78□□□□□ -0.36
TNC-207ENST00000481475 WIZO95785 1651 aa12.77□□□□□ -0.36
TNC-207ENST00000481475 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
TNC-207ENST00000481475 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.37
TNC-207ENST00000481475 WDR97A6NE52 1622 aa12.76□□□□□ -0.37
TNC-207ENST00000481475 RAD54L2Q9Y4B4 1467 aa12.74□□□□□ -0.37
TNC-207ENST00000481475 PPRC1Q5VV67 1664 aaKnown RBP12.72□□□□□ -0.37
TNC-207ENST00000481475 COL17A1Q9UMD9 1497 aaPredicted RBP12.72□□□□□ -0.37
TNC-207ENST00000481475 SHROOM2Q13796 1616 aa12.71□□□□□ -0.37
TNC-207ENST00000481475 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.37
TNC-207ENST00000481475 GRIN2BQ13224 1484 aa12.7□□□□□ -0.38
TNC-207ENST00000481475 PCF11O94913 1555 aaKnown RBP12.69□□□□□ -0.38
TNC-207ENST00000481475 SOGA1O94964 1423 aa12.63□□□□□ -0.39
TNC-207ENST00000481475 ADCY10Q96PN6 1610 aa12.63□□□□□ -0.39
TNC-207ENST00000481475 MSH5O43196 834 aa12.6□□□□□ -0.39
TNC-207ENST00000481475 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
TNC-207ENST00000481475 NUP160Q12769 1436 aa12.6□□□□□ -0.39
TNC-207ENST00000481475 PBRM1Q86U86 1689 aa12.6□□□□□ -0.39
TNC-207ENST00000481475 PTPRMP28827 1452 aa12.59□□□□□ -0.39
TNC-207ENST00000481475 GRIN2AQ12879 1464 aa12.56□□□□□ -0.4
TNC-207ENST00000481475 GLI2P10070 1586 aa12.53□□□□□ -0.4
TNC-207ENST00000481475 PRG4Q92954 1404 aaPredicted RBP12.52□□□□□ -0.41
TNC-207ENST00000481475 TOP2AP11388 1531 aaKnown RBP12.52□□□□□ -0.41
TNC-207ENST00000481475 KIF21BO75037 1637 aa12.51□□□□□ -0.41
TNC-207ENST00000481475 ADAMTSL3P82987 1691 aa12.5□□□□□ -0.41
TNC-207ENST00000481475 FGD5Q6ZNL6 1462 aa12.49□□□□□ -0.41
TNC-207ENST00000481475 HSPA2P54652 639 aa12.47□□□□□ -0.41
TNC-207ENST00000481475 MAP3K4Q9Y6R4 1608 aa12.43□□□□□ -0.42
TNC-207ENST00000481475 MED1Q15648 1581 aaPredicted RBP12.43□□□□□ -0.42
TNC-207ENST00000481475 ABCA5Q8WWZ7 1642 aa12.42□□□□□ -0.42
TNC-207ENST00000481475 ADAMTS12P58397 1594 aa12.42□□□□□ -0.42
TNC-207ENST00000481475 TEX14Q8IWB6 1497 aa12.41□□□□□ -0.42
TNC-207ENST00000481475 ASXL2Q76L83 1435 aa12.37□□□□□ -0.43
TNC-207ENST00000481475 CCDC88BA6NC98 1476 aa12.37□□□□□ -0.43
TNC-207ENST00000481475 MADDQ8WXG6 1647 aa12.37□□□□□ -0.43
TNC-207ENST00000481475 JPH4Q96JJ6 628 aa12.36□□□□□ -0.43
TNC-207ENST00000481475 PLB1Q6P1J6 1458 aa12.35□□□□□ -0.43
TNC-207ENST00000481475 ZBTB22O15209 634 aa12.35□□□□□ -0.43
TNC-207ENST00000481475 IQSEC2Q5JU85 1478 aa12.33□□□□□ -0.44
TNC-207ENST00000481475 KIAA0586Q9BVV6 1533 aa12.32□□□□□ -0.44
TNC-207ENST00000481475 SRCAPQ6ZRS2 3230 aa12.32□□□□□ -0.44
TNC-207ENST00000481475 BCORL1Q5H9F3 1711 aa12.31□□□□□ -0.44
TNC-207ENST00000481475 EPRSP07814 1512 aaKnown RBP12.31□□□□□ -0.44
TNC-207ENST00000481475 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
TNC-207ENST00000481475 RNF216Q9NWF9 866 aaPredicted RBP12.3□□□□□ -0.44
TNC-207ENST00000481475 CUX1P39880 1505 aa12.3□□□□□ -0.44
TNC-207ENST00000481475 ABCC2Q92887 1545 aa12.3□□□□□ -0.44
TNC-207ENST00000481475 MAPK8IP2Q13387 824 aaPredicted RBP12.29□□□□□ -0.44
TNC-207ENST00000481475 LTBP4Q8N2S1 1624 aa12.29□□□□□ -0.44
TNC-207ENST00000481475 RUSC2Q8N2Y8 1516 aa12.28□□□□□ -0.44
TNC-207ENST00000481475 ABCA10Q8WWZ4 1543 aa12.28□□□□□ -0.44
TNC-207ENST00000481475 FHAD1B1AJZ9 1412 aa12.27□□□□□ -0.45
TNC-207ENST00000481475 RIMS1Q86UR5 1692 aaKnown RBP12.26□□□□□ -0.45
TNC-207ENST00000481475 STRCQ7RTU9 1775 aa12.26□□□□□ -0.45
TNC-207ENST00000481475 CUL7Q14999 1698 aa12.24□□□□□ -0.45
TNC-207ENST00000481475 YEATS2Q9ULM3 1422 aa12.23□□□□□ -0.45
TNC-207ENST00000481475 DMRT2Q9Y5R5 561 aa12.18□□□□□ -0.46
TNC-207ENST00000481475 MAGI3Q5TCQ9 1506 aa12.17□□□□□ -0.46
TNC-207ENST00000481475 PTPRTO14522 1441 aa12.14□□□□□ -0.47
TNC-207ENST00000481475 CFAP43Q8NDM7 1665 aa12.14□□□□□ -0.47
TNC-207ENST00000481475 PTPRGP23470 1445 aa12.12□□□□□ -0.47
TNC-207ENST00000481475 UBAP1LF5GYI3 381 aa12.12□□□□□ -0.47
TNC-207ENST00000481475 HSPA1LP34931 641 aa12.12□□□□□ -0.47
TNC-207ENST00000481475 UHRF1BP1LA0JNW5 1464 aa12.12□□□□□ -0.47
TNC-207ENST00000481475 PREX1Q8TCU6 1659 aa12.12□□□□□ -0.47
TNC-207ENST00000481475 ARAP3Q8WWN8 1544 aa12.11□□□□□ -0.47
TNC-207ENST00000481475 ERICH3Q5RHP9 1530 aa12.09□□□□□ -0.47
TNC-207ENST00000481475 KDM5BQ9UGL1 1544 aa12.09□□□□□ -0.47
TNC-207ENST00000481475 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
TNC-207ENST00000481475 CD109Q6YHK3 1445 aa12.07□□□□□ -0.48
TNC-207ENST00000481475 RGS17Q9UGC6 210 aaPredicted RBP12.07□□□□□ -0.48
TNC-207ENST00000481475 ZCCHC11Q5TAX3 1644 aaKnown RBP12.06□□□□□ -0.48
TNC-207ENST00000481475 ARID4BQ4LE39 1312 aaPredicted RBP12.06□□□□□ -0.48
TNC-207ENST00000481475 TTC37Q6PGP7 1564 aa12.05□□□□□ -0.48
TNC-207ENST00000481475 WDR7Q9Y4E6 1490 aa12.04□□□□□ -0.48
TNC-207ENST00000481475 UACAQ9BZF9 1416 aa12.02□□□□□ -0.49
TNC-207ENST00000481475 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
TNC-207ENST00000481475 TNIKQ9UKE5 1360 aa12□□□□□ -0.49
TNC-207ENST00000481475 SETD1AO15047 1707 aaKnown RBP12□□□□□ -0.49
TNC-207ENST00000481475 ARHGEF40Q8TER5 1519 aa11.99□□□□□ -0.49
TNC-207ENST00000481475 FRMPD1Q5SYB0 1578 aa11.99□□□□□ -0.49
TNC-207ENST00000481475 FER1L4A9Z1Z3 1794 aa11.97□□□□□ -0.49
TNC-207ENST00000481475 SIGLEC1Q9BZZ2 1709 aa11.97□□□□□ -0.49
TNC-207ENST00000481475 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
TNC-207ENST00000481475 UHRF1BP1Q6BDS2 1440 aa11.94□□□□□ -0.5
TNC-207ENST00000481475 IFFO2Q5TF58 517 aa11.93□□□□□ -0.5
TNC-207ENST00000481475 ZNF335Q9H4Z2 1342 aaPredicted RBP11.92□□□□□ -0.5
TNC-207ENST00000481475 POTEAQ6S8J7 498 aa11.91□□□□□ -0.5
TNC-207ENST00000481475 WRNQ14191 1432 aaPredicted RBP eCLIP11.91□□□□□ -0.5
TNC-207ENST00000481475 POGZQ7Z3K3 1410 aa11.91□□□□□ -0.5
TNC-207ENST00000481475 FANCAO15360 1455 aa11.9□□□□□ -0.5
TNC-207ENST00000481475 PIP4K2BP78356 416 aa11.9□□□□□ -0.5
TNC-207ENST00000481475 NCOA1Q15788 1441 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms