RNA–Protein interactions for RNA: ENST00000481460.1

TRAPPC10-209, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-209ENST00000481460 HOXD11P31277 338 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC10-209ENST00000481460 CHMP7Q8WUX9 453 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC10-209ENST00000481460 MAPKBP1O60336 1514 aa10.48□□□□□ -0.73
TRAPPC10-209ENST00000481460 TSPOAP1O95153 1857 aa10.48□□□□□ -0.73
TRAPPC10-209ENST00000481460 TOP2BQ02880 1626 aa10.47□□□□□ -0.73
TRAPPC10-209ENST00000481460 ABCC8Q09428 1581 aa10.47□□□□□ -0.73
TRAPPC10-209ENST00000481460 SNAPC4Q5SXM2 1469 aa10.46□□□□□ -0.74
TRAPPC10-209ENST00000481460 PRDM2Q13029 1718 aa10.45□□□□□ -0.74
TRAPPC10-209ENST00000481460 MAGI1Q96QZ7 1491 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC10-209ENST00000481460 SLC4A1APQ9BWU0 796 aaKnown RBP10.45□□□□□ -0.74
TRAPPC10-209ENST00000481460 WDR97A6NE52 1622 aa10.4□□□□□ -0.74
TRAPPC10-209ENST00000481460 CEP170Q5SW79 1584 aa10.38□□□□□ -0.75
TRAPPC10-209ENST00000481460 DNMBPQ6XZF7 1577 aa10.38□□□□□ -0.75
TRAPPC10-209ENST00000481460 TDRD9Q8NDG6 1382 aaKnown RBP10.37□□□□□ -0.75
TRAPPC10-209ENST00000481460 COL17A1Q9UMD9 1497 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC10-209ENST00000481460 SHROOM2Q13796 1616 aa10.35□□□□□ -0.75
TRAPPC10-209ENST00000481460 PCF11O94913 1555 aaKnown RBP10.35□□□□□ -0.75
TRAPPC10-209ENST00000481460 PPRC1Q5VV67 1664 aaKnown RBP10.34□□□□□ -0.75
TRAPPC10-209ENST00000481460 POLA1P09884 1462 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC10-209ENST00000481460 NPM1P06748 294 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRAPPC10-209ENST00000481460 GRIN2BQ13224 1484 aa10.31□□□□□ -0.76
TRAPPC10-209ENST00000481460 RAD54L2Q9Y4B4 1467 aa10.29□□□□□ -0.76
TRAPPC10-209ENST00000481460 PTPRMP28827 1452 aa10.28□□□□□ -0.76
TRAPPC10-209ENST00000481460 WIZO95785 1651 aa10.27□□□□□ -0.77
TRAPPC10-209ENST00000481460 SOGA1O94964 1423 aa10.25□□□□□ -0.77
TRAPPC10-209ENST00000481460 EHMT2Q96KQ7 1210 aa10.25□□□□□ -0.77
TRAPPC10-209ENST00000481460 GLI2P10070 1586 aa10.24□□□□□ -0.77
TRAPPC10-209ENST00000481460 ADCY10Q96PN6 1610 aa10.24□□□□□ -0.77
TRAPPC10-209ENST00000481460 NUP160Q12769 1436 aa10.24□□□□□ -0.77
TRAPPC10-209ENST00000481460 ADAMTSL3P82987 1691 aa10.22□□□□□ -0.77
TRAPPC10-209ENST00000481460 POTEDQ86YR6 584 aa10.2□□□□□ -0.78
TRAPPC10-209ENST00000481460 GRIN2AQ12879 1464 aa10.17□□□□□ -0.78
TRAPPC10-209ENST00000481460 PRG4Q92954 1404 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC10-209ENST00000481460 PBRM1Q86U86 1689 aa10.17□□□□□ -0.78
TRAPPC10-209ENST00000481460 CSRNP3Q8WYN3 585 aa10.16□□□□□ -0.78
TRAPPC10-209ENST00000481460 IQSEC2Q5JU85 1478 aa10.16□□□□□ -0.78
TRAPPC10-209ENST00000481460 ZBTB22O15209 634 aa10.15□□□□□ -0.78
TRAPPC10-209ENST00000481460 HSPA2P54652 639 aa10.15□□□□□ -0.78
TRAPPC10-209ENST00000481460 MED1Q15648 1581 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC10-209ENST00000481460 DCAF8L1A6NGE4 600 aa10.14□□□□□ -0.79
TRAPPC10-209ENST00000481460 SLC4A2P04920 1241 aa10.13□□□□□ -0.79
TRAPPC10-209ENST00000481460 KIF21BO75037 1637 aa10.13□□□□□ -0.79
TRAPPC10-209ENST00000481460 TEX14Q8IWB6 1497 aa10.12□□□□□ -0.79
TRAPPC10-209ENST00000481460 MAP3K4Q9Y6R4 1608 aa10.11□□□□□ -0.79
TRAPPC10-209ENST00000481460 JPH4Q96JJ6 628 aa10.09□□□□□ -0.79
TRAPPC10-209ENST00000481460 PLB1Q6P1J6 1458 aa10.09□□□□□ -0.79
TRAPPC10-209ENST00000481460 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
TRAPPC10-209ENST00000481460 FGD5Q6ZNL6 1462 aa10.07□□□□□ -0.8
TRAPPC10-209ENST00000481460 SRCAPQ6ZRS2 3230 aa10.07□□□□□ -0.8
TRAPPC10-209ENST00000481460 KIAA0586Q9BVV6 1533 aa10.07□□□□□ -0.8
TRAPPC10-209ENST00000481460 LTBP4Q8N2S1 1624 aa10.05□□□□□ -0.8
TRAPPC10-209ENST00000481460 FOXD4L1Q9NU39 408 aa10.05□□□□□ -0.8
TRAPPC10-209ENST00000481460 ASXL2Q76L83 1435 aa10.05□□□□□ -0.8
TRAPPC10-209ENST00000481460 BCORL1Q5H9F3 1711 aa10.04□□□□□ -0.8
TRAPPC10-209ENST00000481460 ABCA5Q8WWZ7 1642 aa10.04□□□□□ -0.8
TRAPPC10-209ENST00000481460 STRCQ7RTU9 1775 aa10.03□□□□□ -0.8
TRAPPC10-209ENST00000481460 MADDQ8WXG6 1647 aa10.03□□□□□ -0.8
TRAPPC10-209ENST00000481460 YEATS2Q9ULM3 1422 aa10.02□□□□□ -0.81
TRAPPC10-209ENST00000481460 ADAMTS12P58397 1594 aa10.01□□□□□ -0.81
TRAPPC10-209ENST00000481460 EPRSP07814 1512 aaKnown RBP10.01□□□□□ -0.81
TRAPPC10-209ENST00000481460 ABCC2Q92887 1545 aa9.99□□□□□ -0.81
TRAPPC10-209ENST00000481460 CCDC88BA6NC98 1476 aa9.98□□□□□ -0.81
TRAPPC10-209ENST00000481460 PTPRTO14522 1441 aa9.97□□□□□ -0.81
TRAPPC10-209ENST00000481460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.96□□□□□ -0.82
TRAPPC10-209ENST00000481460 ABCA10Q8WWZ4 1543 aa9.96□□□□□ -0.82
TRAPPC10-209ENST00000481460 FHAD1B1AJZ9 1412 aa9.95□□□□□ -0.82
TRAPPC10-209ENST00000481460 RIMS1Q86UR5 1692 aaKnown RBP9.95□□□□□ -0.82
TRAPPC10-209ENST00000481460 MAGI3Q5TCQ9 1506 aa9.93□□□□□ -0.82
TRAPPC10-209ENST00000481460 IFFO2Q5TF58 517 aa9.92□□□□□ -0.82
TRAPPC10-209ENST00000481460 CUL7Q14999 1698 aa9.91□□□□□ -0.82
TRAPPC10-209ENST00000481460 UBAP1LF5GYI3 381 aa9.91□□□□□ -0.82
TRAPPC10-209ENST00000481460 HSPA1LP34931 641 aa9.91□□□□□ -0.82
TRAPPC10-209ENST00000481460 ARAP3Q8WWN8 1544 aa9.91□□□□□ -0.82
TRAPPC10-209ENST00000481460 RGS17Q9UGC6 210 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC10-209ENST00000481460 CUX1P39880 1505 aa9.9□□□□□ -0.82
TRAPPC10-209ENST00000481460 RUSC2Q8N2Y8 1516 aa9.9□□□□□ -0.82
TRAPPC10-209ENST00000481460 CFAP43Q8NDM7 1665 aa9.9□□□□□ -0.83
TRAPPC10-209ENST00000481460 PREX1Q8TCU6 1659 aa9.88□□□□□ -0.83
TRAPPC10-209ENST00000481460 UHRF1BP1LA0JNW5 1464 aa9.88□□□□□ -0.83
TRAPPC10-209ENST00000481460 SETD1BQ9UPS6 1966 aaKnown RBP9.87□□□□□ -0.83
TRAPPC10-209ENST00000481460 PTPRGP23470 1445 aa9.86□□□□□ -0.83
TRAPPC10-209ENST00000481460 MYCNP04198 464 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC10-209ENST00000481460 U3KPZ7 1027 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC10-209ENST00000481460 KDM5BQ9UGL1 1544 aa9.84□□□□□ -0.83
TRAPPC10-209ENST00000481460 CD109Q6YHK3 1445 aa9.82□□□□□ -0.84
TRAPPC10-209ENST00000481460 TTC37Q6PGP7 1564 aa9.8□□□□□ -0.84
TRAPPC10-209ENST00000481460 ERICH3Q5RHP9 1530 aa9.8□□□□□ -0.84
TRAPPC10-209ENST00000481460 ARID4BQ4LE39 1312 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC10-209ENST00000481460 PHLDB1Q86UU1 1377 aa9.77□□□□□ -0.84
TRAPPC10-209ENST00000481460 RNF39Q9H2S5 420 aa9.77□□□□□ -0.85
TRAPPC10-209ENST00000481460 WDR7Q9Y4E6 1490 aa9.76□□□□□ -0.85
TRAPPC10-209ENST00000481460 TNIKQ9UKE5 1360 aa9.75□□□□□ -0.85
TRAPPC10-209ENST00000481460 ZCCHC11Q5TAX3 1644 aaKnown RBP9.75□□□□□ -0.85
TRAPPC10-209ENST00000481460 UACAQ9BZF9 1416 aa9.75□□□□□ -0.85
TRAPPC10-209ENST00000481460 POTEAQ6S8J7 498 aa9.75□□□□□ -0.85
TRAPPC10-209ENST00000481460 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
TRAPPC10-209ENST00000481460 SETD1AO15047 1707 aaKnown RBP9.73□□□□□ -0.85
TRAPPC10-209ENST00000481460 FER1L4A9Z1Z3 1794 aa9.73□□□□□ -0.85
TRAPPC10-209ENST00000481460 UHRF1BP1Q6BDS2 1440 aa9.72□□□□□ -0.85
TRAPPC10-209ENST00000481460 POGZQ7Z3K3 1410 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms