RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 ACIN1Q9UKV3 1341 aaKnown RBP25.33■■□□□ 1.65
PKD1-213ENST00000480227 MAP3K1Q13233 1512 aa25.33■■□□□ 1.65
PKD1-213ENST00000480227 PCF11O94913 1555 aaKnown RBP25.33■■□□□ 1.65
PKD1-213ENST00000480227 WDR97A6NE52 1622 aa25.33■■□□□ 1.65
PKD1-213ENST00000480227 FHOD3Q2V2M9 1422 aa25.31■■□□□ 1.64
PKD1-213ENST00000480227 LRRC9Q6ZRR7 1453 aa25.3■■□□□ 1.64
PKD1-213ENST00000480227 FHAD1B1AJZ9 1412 aa25.3■■□□□ 1.64
PKD1-213ENST00000480227 ATP1B4Q9UN42 357 aaPredicted RBP25.29■■□□□ 1.64
PKD1-213ENST00000480227 CTTNBP2Q8WZ74 1663 aa25.29■■□□□ 1.64
PKD1-213ENST00000480227 TDRD9Q8NDG6 1382 aaKnown RBP25.28■■□□□ 1.64
PKD1-213ENST00000480227 KIF21AQ7Z4S6 1674 aa25.27■■□□□ 1.64
PKD1-213ENST00000480227 PDS5BQ9NTI5 1447 aa25.26■■□□□ 1.63
PKD1-213ENST00000480227 CLSPNQ9HAW4 1339 aa25.25■■□□□ 1.63
PKD1-213ENST00000480227 CFAP43Q8NDM7 1665 aa25.25■■□□□ 1.63
PKD1-213ENST00000480227 PHLDB1Q86UU1 1377 aa25.24■■□□□ 1.63
PKD1-213ENST00000480227 ABCA5Q8WWZ7 1642 aa25.23■■□□□ 1.63
PKD1-213ENST00000480227 CENPBP07199 599 aaPredicted RBP25.23■■□□□ 1.63
PKD1-213ENST00000480227 EFCAB5A4FU69 1503 aa25.22■■□□□ 1.63
PKD1-213ENST00000480227 GAPVD1Q14C86 1478 aa25.18■■□□□ 1.62
PKD1-213ENST00000480227 FYCO1Q9BQS8 1478 aa25.16■■□□□ 1.62
PKD1-213ENST00000480227 MIER1Q8N108 512 aa25.15■■□□□ 1.62
PKD1-213ENST00000480227 RAB3GAP2Q9H2M9 1393 aa25.14■■□□□ 1.62
PKD1-213ENST00000480227 CASKIN1Q8WXD9 1431 aa25.14■■□□□ 1.61
PKD1-213ENST00000480227 FAM50AQ14320 339 aaKnown RBP25.13■■□□□ 1.61
PKD1-213ENST00000480227 YTHDC1Q96MU7 727 aaKnown RBP25.1■■□□□ 1.61
PKD1-213ENST00000480227 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.611e-6■■■■■ 50
PKD1-213ENST00000480227 TARBP1Q13395 1621 aaKnown RBP25.08■■□□□ 1.61
PKD1-213ENST00000480227 GTF3C3Q9Y5Q9 886 aa25.06■■□□□ 1.6
PKD1-213ENST00000480227 FMN1Q68DA7 1419 aa25.06■■□□□ 1.6
PKD1-213ENST00000480227 SNAPC4Q5SXM2 1469 aa25.05■■□□□ 1.6
PKD1-213ENST00000480227 SAMD9Q5K651 1589 aa25.04■■□□□ 1.6
PKD1-213ENST00000480227 SETD5Q9C0A6 1442 aa25.03■■□□□ 1.6
PKD1-213ENST00000480227 MAPKBP1O60336 1514 aa25.01■■□□□ 1.59
PKD1-213ENST00000480227 LRRIQ1Q96JM4 1722 aa25.01■■□□□ 1.59
PKD1-213ENST00000480227 PBRM1Q86U86 1689 aa24.97■■□□□ 1.59
PKD1-213ENST00000480227 MTUS2Q5JR59 1369 aa24.93■■□□□ 1.58
PKD1-213ENST00000480227 GRIN2BQ13224 1484 aa24.91■■□□□ 1.58
PKD1-213ENST00000480227 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
PKD1-213ENST00000480227 FGD6Q6ZV73 1430 aa24.9■■□□□ 1.58
PKD1-213ENST00000480227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.86■■□□□ 1.57
PKD1-213ENST00000480227 SIN3AQ96ST3 1273 aa24.85■■□□□ 1.57
PKD1-213ENST00000480227 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
PKD1-213ENST00000480227 NCOA2Q15596 1464 aa24.82■■□□□ 1.56
PKD1-213ENST00000480227 THOC2Q8NI27 1593 aaKnown RBP24.81■■□□□ 1.56
PKD1-213ENST00000480227 IQGAP2Q13576 1575 aa24.8■■□□□ 1.56
PKD1-213ENST00000480227 ZNF608Q9ULD9 1512 aaPredicted RBP24.79■■□□□ 1.56
PKD1-213ENST00000480227 SUPT6HQ7KZ85 1726 aaKnown RBP24.78■■□□□ 1.56
PKD1-213ENST00000480227 PTPRKQ15262 1439 aa24.78■■□□□ 1.56
PKD1-213ENST00000480227 MAGI3Q5TCQ9 1506 aa24.77■■□□□ 1.56
PKD1-213ENST00000480227 EHBP1L1Q8N3D4 1523 aa24.76■■□□□ 1.55
PKD1-213ENST00000480227 MYOM3Q5VTT5 1437 aa24.76■■□□□ 1.55
PKD1-213ENST00000480227 IFT140Q96RY7 1462 aa24.71■■□□□ 1.55
PKD1-213ENST00000480227 WDR62O43379 1518 aa24.7■■□□□ 1.55
PKD1-213ENST00000480227 CCDC18Q5T9S5 1454 aa24.7■■□□□ 1.54
PKD1-213ENST00000480227 UGGT2Q9NYU1 1516 aa24.7■■□□□ 1.54
PKD1-213ENST00000480227 HECW1Q76N89 1606 aa24.7■■□□□ 1.54
PKD1-213ENST00000480227 ARID3CA6NKF2 412 aa24.69■■□□□ 1.54
PKD1-213ENST00000480227 PELP1Q8IZL8 1130 aaKnown RBP24.69■■□□□ 1.54
PKD1-213ENST00000480227 PTPN23Q9H3S7 1636 aa24.68■■□□□ 1.54
PKD1-213ENST00000480227 HFM1A2PYH4 1435 aa24.67■■□□□ 1.54
PKD1-213ENST00000480227 ARHGEF11O15085 1522 aa24.66■■□□□ 1.54
PKD1-213ENST00000480227 EPRSP07814 1512 aaKnown RBP24.66■■□□□ 1.54
PKD1-213ENST00000480227 CDK13Q14004 1512 aaKnown RBP24.66■■□□□ 1.54
PKD1-213ENST00000480227 NAIPQ13075 1403 aa24.63■■□□□ 1.53
PKD1-213ENST00000480227 EIF4G3O43432 1585 aaKnown RBP24.61■■□□□ 1.53
PKD1-213ENST00000480227 UACAQ9BZF9 1416 aa24.58■■□□□ 1.53
PKD1-213ENST00000480227 CHIC2Q9UKJ5 165 aa24.57■■□□□ 1.52
PKD1-213ENST00000480227 TIMELESSQ9UNS1 1208 aa24.57■■□□□ 1.52
PKD1-213ENST00000480227 ERCC6Q03468 1493 aa24.56■■□□□ 1.52
PKD1-213ENST00000480227 DISP1Q96F81 1524 aa24.55■■□□□ 1.52
PKD1-213ENST00000480227 KIAA0586Q9BVV6 1533 aa24.55■■□□□ 1.52
PKD1-213ENST00000480227 RRP7BPQ9NSQ0 103 aa24.55■■□□□ 1.52
PKD1-213ENST00000480227 PPP1R15AO75807 674 aaPredicted RBP24.54■■□□□ 1.52
PKD1-213ENST00000480227 KIAA0556O60303 1618 aa24.54■■□□□ 1.52
PKD1-213ENST00000480227 GRIN2AQ12879 1464 aa24.54■■□□□ 1.52
PKD1-213ENST00000480227 TCOF1Q13428 1488 aaKnown RBP24.53■■□□□ 1.52
PKD1-213ENST00000480227 HIRIP3Q9BW71 556 aaPredicted RBP24.51■■□□□ 1.51
PKD1-213ENST00000480227 TONSLQ96HA7 1378 aa24.49■■□□□ 1.51
PKD1-213ENST00000480227 DDX10Q13206 875 aaKnown RBP24.47■■□□□ 1.51
PKD1-213ENST00000480227 GCC2Q8IWJ2 1684 aa24.46■■□□□ 1.51
PKD1-213ENST00000480227 NUP153P49790 1475 aaKnown RBP24.45■■□□□ 1.5
PKD1-213ENST00000480227 KDM6BO15054 1643 aa24.45■■□□□ 1.5
PKD1-213ENST00000480227 MIA2Q96PC5 1412 aa24.44■■□□□ 1.5
PKD1-213ENST00000480227 KCNH8Q96L42 1107 aa24.43■■□□□ 1.5
PKD1-213ENST00000480227 RAPGEF6Q8TEU7 1601 aa24.43■■□□□ 1.5
PKD1-213ENST00000480227 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
PKD1-213ENST00000480227 CEP170Q5SW79 1584 aa24.41■■□□□ 1.5
PKD1-213ENST00000480227 FBLN2P98095 1184 aa24.41■■□□□ 1.5
PKD1-213ENST00000480227 MAGI1Q96QZ7 1491 aaPredicted RBP24.4■■□□□ 1.5
PKD1-213ENST00000480227 TRIM52Q96A61 297 aa24.39■■□□□ 1.49
PKD1-213ENST00000480227 DENND4BO75064 1496 aaPredicted RBP24.38■■□□□ 1.49
PKD1-213ENST00000480227 SYNJ2O15056 1496 aa24.37■■□□□ 1.49
PKD1-213ENST00000480227 AKNAQ7Z591 1439 aa24.36■■□□□ 1.49
PKD1-213ENST00000480227 ZNF644Q9H582 1327 aaPredicted RBP24.36■■□□□ 1.49
PKD1-213ENST00000480227 KDM5BQ9UGL1 1544 aa24.33■■□□□ 1.49
PKD1-213ENST00000480227 PLB1Q6P1J6 1458 aa24.33■■□□□ 1.48
PKD1-213ENST00000480227 DAPK1P53355 1430 aa24.31■■□□□ 1.48
PKD1-213ENST00000480227 PRG4Q92954 1404 aaPredicted RBP24.3■■□□□ 1.48
PKD1-213ENST00000480227 CDK11AQ9UQ88 783 aaPredicted RBP24.3■■□□□ 1.48
PKD1-213ENST00000480227 DNMT1P26358 1616 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms