RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 NUP160Q12769 1436 aa20.25■□□□□ 0.83
SIK3-209ENST00000480222 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
SIK3-209ENST00000480222 IQGAP2Q13576 1575 aa20.23■□□□□ 0.83
SIK3-209ENST00000480222 CEP170Q5SW79 1584 aa20.23■□□□□ 0.83
SIK3-209ENST00000480222 OSCARQ8IYS5 282 aa20.22■□□□□ 0.83
SIK3-209ENST00000480222 KIAA0586Q9BVV6 1533 aa20.2■□□□□ 0.82
SIK3-209ENST00000480222 CLIP1P30622 1438 aa20.19■□□□□ 0.82
SIK3-209ENST00000480222 EFCAB5A4FU69 1503 aa20.19■□□□□ 0.82
SIK3-209ENST00000480222 FBLN2P98095 1184 aa20.15■□□□□ 0.82
SIK3-209ENST00000480222 SAMD9Q5K651 1589 aa20.13■□□□□ 0.81
SIK3-209ENST00000480222 UGGT2Q9NYU1 1516 aa20.13■□□□□ 0.81
SIK3-209ENST00000480222 ARHGAP35Q9NRY4 1499 aa20.1■□□□□ 0.81
SIK3-209ENST00000480222 CLASP1Q7Z460 1538 aa20.09■□□□□ 0.81
SIK3-209ENST00000480222 SHROOM2Q13796 1616 aa20.06■□□□□ 0.8
SIK3-209ENST00000480222 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
SIK3-209ENST00000480222 RIMBP3CA6NJZ7 1639 aa20.04■□□□□ 0.8
SIK3-209ENST00000480222 RIMBP3BA6NNM3 1639 aa20.04■□□□□ 0.8
SIK3-209ENST00000480222 KIAA0556O60303 1618 aa20.04■□□□□ 0.8
SIK3-209ENST00000480222 RIMBP3Q9UFD9 1639 aa20.04■□□□□ 0.8
SIK3-209ENST00000480222 VPS8Q8N3P4 1428 aa20■□□□□ 0.79
SIK3-209ENST00000480222 DISP1Q96F81 1524 aa19.99■□□□□ 0.79
SIK3-209ENST00000480222 RANGAP1P46060 587 aaPredicted RBP19.98■□□□□ 0.79
SIK3-209ENST00000480222 ARHGEF11O15085 1522 aa19.97■□□□□ 0.79
SIK3-209ENST00000480222 CARMIL2Q6F5E8 1435 aa19.96■□□□□ 0.79
SIK3-209ENST00000480222 FHOD3Q2V2M9 1422 aa19.95■□□□□ 0.78
SIK3-209ENST00000480222 FMN1Q68DA7 1419 aa19.93■□□□□ 0.78
SIK3-209ENST00000480222 JPH4Q96JJ6 628 aa19.92■□□□□ 0.78
SIK3-209ENST00000480222 PRG4Q92954 1404 aaPredicted RBP19.89■□□□□ 0.77
SIK3-209ENST00000480222 PCF11O94913 1555 aaKnown RBP19.88■□□□□ 0.77
SIK3-209ENST00000480222 FYCO1Q9BQS8 1478 aa19.87■□□□□ 0.77
SIK3-209ENST00000480222 CASKIN1Q8WXD9 1431 aa19.84■□□□□ 0.77
SIK3-209ENST00000480222 P3H3Q8IVL6 736 aa19.82■□□□□ 0.76
SIK3-209ENST00000480222 HECW1Q76N89 1606 aa19.82■□□□□ 0.76
SIK3-209ENST00000480222 ERCC6L2Q5T890 1561 aa19.79■□□□□ 0.76
SIK3-209ENST00000480222 CFAP43Q8NDM7 1665 aa19.79■□□□□ 0.76
SIK3-209ENST00000480222 RAPGEF6Q8TEU7 1601 aa19.79■□□□□ 0.76
SIK3-209ENST00000480222 MAP3K1Q13233 1512 aa19.78■□□□□ 0.76
SIK3-209ENST00000480222 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
SIK3-209ENST00000480222 ABCA8O94911 1581 aa19.74■□□□□ 0.75
SIK3-209ENST00000480222 CCDC18Q5T9S5 1454 aa19.74■□□□□ 0.75
SIK3-209ENST00000480222 TIAM1Q13009 1591 aa19.74■□□□□ 0.75
SIK3-209ENST00000480222 PTPRGP23470 1445 aa19.73■□□□□ 0.75
SIK3-209ENST00000480222 LRRIQ1Q96JM4 1722 aa19.71■□□□□ 0.75
SIK3-209ENST00000480222 PLB1Q6P1J6 1458 aa19.69■□□□□ 0.74
SIK3-209ENST00000480222 APLP2Q06481 763 aa19.69■□□□□ 0.74
SIK3-209ENST00000480222 NUP153P49790 1475 aaKnown RBP19.68■□□□□ 0.74
SIK3-209ENST00000480222 EPRSP07814 1512 aaKnown RBP19.66■□□□□ 0.74
SIK3-209ENST00000480222 ABCC2Q92887 1545 aa19.66■□□□□ 0.74
SIK3-209ENST00000480222 UACAQ9BZF9 1416 aa19.65■□□□□ 0.74
SIK3-209ENST00000480222 UHRF1BP1LA0JNW5 1464 aa19.65■□□□□ 0.74
SIK3-209ENST00000480222 TRHP20396 242 aaPredicted RBP19.61■□□□□ 0.73
SIK3-209ENST00000480222 EHBP1L1Q8N3D4 1523 aa19.61■□□□□ 0.73
SIK3-209ENST00000480222 TTBK1Q5TCY1 1321 aaPredicted RBP19.6■□□□□ 0.73
SIK3-209ENST00000480222 CDK13Q14004 1512 aaKnown RBP19.6■□□□□ 0.73
SIK3-209ENST00000480222 LRRC9Q6ZRR7 1453 aa19.6■□□□□ 0.73
SIK3-209ENST00000480222 ATP1B4Q9UN42 357 aaPredicted RBP19.58■□□□□ 0.72
SIK3-209ENST00000480222 ADCY10Q96PN6 1610 aa19.56■□□□□ 0.72
SIK3-209ENST00000480222 KDM5BQ9UGL1 1544 aa19.54■□□□□ 0.72
SIK3-209ENST00000480222 ZCCHC11Q5TAX3 1644 aaKnown RBP19.52■□□□□ 0.72
SIK3-209ENST00000480222 SUPT6HQ7KZ85 1726 aaKnown RBP19.52■□□□□ 0.72
SIK3-209ENST00000480222 ATP10BO94823 1461 aa19.52■□□□□ 0.72
SIK3-209ENST00000480222 MAGI3Q5TCQ9 1506 aa19.51■□□□□ 0.71
SIK3-209ENST00000480222 MTUS2Q5JR59 1369 aa19.51■□□□□ 0.71
SIK3-209ENST00000480222 CDK11AQ9UQ88 783 aaPredicted RBP19.49■□□□□ 0.71
SIK3-209ENST00000480222 KANK4Q5T7N3 995 aaPredicted RBP19.48■□□□□ 0.71
SIK3-209ENST00000480222 TROQ12816 1431 aaPredicted RBP19.47■□□□□ 0.71
SIK3-209ENST00000480222 KIF14Q15058 1648 aa19.44■□□□□ 0.7
SIK3-209ENST00000480222 NCOA2Q15596 1464 aa19.42■□□□□ 0.7
SIK3-209ENST00000480222 ARID3CA6NKF2 412 aa19.42■□□□□ 0.7
SIK3-209ENST00000480222 PPARGC1BQ86YN6 1023 aaKnown RBP19.42■□□□□ 0.7
SIK3-209ENST00000480222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.41■□□□□ 0.7
SIK3-209ENST00000480222 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
SIK3-209ENST00000480222 ITSN2Q9NZM3 1697 aa19.37■□□□□ 0.69
SIK3-209ENST00000480222 PLEKHD1A6NEE1 506 aa19.37■□□□□ 0.69
SIK3-209ENST00000480222 WDR7Q9Y4E6 1490 aa19.36■□□□□ 0.69
SIK3-209ENST00000480222 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
SIK3-209ENST00000480222 RRBP1Q9P2E9 1410 aaKnown RBP19.34■□□□□ 0.69
SIK3-209ENST00000480222 PHLDB1Q86UU1 1377 aa19.34■□□□□ 0.69
SIK3-209ENST00000480222 TRIM26Q12899 539 aaPredicted RBP19.34■□□□□ 0.69
SIK3-209ENST00000480222 MYOM3Q5VTT5 1437 aa19.34■□□□□ 0.69
SIK3-209ENST00000480222 ABCC10Q5T3U5 1492 aa19.31■□□□□ 0.68
SIK3-209ENST00000480222 NPM1P06748 294 aaKnown RBP eCLIP19.31■□□□□ 0.68
SIK3-209ENST00000480222 ASXL2Q76L83 1435 aa19.31■□□□□ 0.68
SIK3-209ENST00000480222 FGD6Q6ZV73 1430 aa19.29■□□□□ 0.68
SIK3-209ENST00000480222 TTC37Q6PGP7 1564 aa19.28■□□□□ 0.68
SIK3-209ENST00000480222 MIA2Q96PC5 1412 aa19.28■□□□□ 0.68
SIK3-209ENST00000480222 PREX2Q70Z35 1606 aa19.28■□□□□ 0.68
SIK3-209ENST00000480222 CCNB3Q8WWL7 1395 aa19.28■□□□□ 0.68
SIK3-209ENST00000480222 CDC42BPAQ5VT25 1732 aa19.28■□□□□ 0.68
SIK3-209ENST00000480222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.27■□□□□ 0.68
SIK3-209ENST00000480222 MYO5CQ9NQX4 1742 aa19.27■□□□□ 0.68
SIK3-209ENST00000480222 ABCA9Q8IUA7 1624 aa19.25■□□□□ 0.67
SIK3-209ENST00000480222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.25■□□□□ 0.67
SIK3-209ENST00000480222 PTPN23Q9H3S7 1636 aa19.25■□□□□ 0.67
SIK3-209ENST00000480222 GPATCH8Q9UKJ3 1502 aaKnown RBP19.24■□□□□ 0.67
SIK3-209ENST00000480222 TCOF1Q13428 1488 aaKnown RBP19.23■□□□□ 0.67
SIK3-209ENST00000480222 ARAP3Q8WWN8 1544 aa19.23■□□□□ 0.67
SIK3-209ENST00000480222 CDC42BPBQ9Y5S2 1711 aa19.19■□□□□ 0.66
SIK3-209ENST00000480222 GLI2P10070 1586 aa19.18■□□□□ 0.66
SIK3-209ENST00000480222 AEBP2Q6ZN18 517 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms