RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 ADAMTS12P58397 1594 aa10.42□□□□□ -0.74
HERC4-210ENST00000480158 CUL7Q14999 1698 aa10.41□□□□□ -0.74
HERC4-210ENST00000480158 SYNJ2O15056 1496 aa10.41□□□□□ -0.74
HERC4-210ENST00000480158 GOLGA3Q08378 1498 aa10.4□□□□□ -0.74
HERC4-210ENST00000480158 KIF21BO75037 1637 aa10.39□□□□□ -0.75
HERC4-210ENST00000480158 GRIN2AQ12879 1464 aa10.38□□□□□ -0.75
HERC4-210ENST00000480158 CHD1O14646 1710 aa10.36□□□□□ -0.75
HERC4-210ENST00000480158 OSCARQ8IYS5 282 aa10.33□□□□□ -0.76
HERC4-210ENST00000480158 CEP170Q5SW79 1584 aa10.32□□□□□ -0.76
HERC4-210ENST00000480158 TNIKQ9UKE5 1360 aa10.32□□□□□ -0.76
HERC4-210ENST00000480158 P3H3Q8IVL6 736 aa10.32□□□□□ -0.76
HERC4-210ENST00000480158 TTBK1Q5TCY1 1321 aaPredicted RBP10.31□□□□□ -0.76
HERC4-210ENST00000480158 NUP160Q12769 1436 aa10.3□□□□□ -0.76
HERC4-210ENST00000480158 FOXD1Q16676 465 aa10.29□□□□□ -0.76
HERC4-210ENST00000480158 JPH4Q96JJ6 628 aa10.28□□□□□ -0.76
HERC4-210ENST00000480158 KIAA0586Q9BVV6 1533 aa10.28□□□□□ -0.76
HERC4-210ENST00000480158 CEP162Q5TB80 1403 aa10.28□□□□□ -0.76
HERC4-210ENST00000480158 CTTNBP2Q8WZ74 1663 aa10.27□□□□□ -0.77
HERC4-210ENST00000480158 IQGAP2Q13576 1575 aa10.26□□□□□ -0.77
HERC4-210ENST00000480158 CLIP1P30622 1438 aa10.26□□□□□ -0.77
HERC4-210ENST00000480158 SLC4A1APQ9BWU0 796 aaKnown RBP10.23□□□□□ -0.77
HERC4-210ENST00000480158 PRG4Q92954 1404 aaPredicted RBP10.22□□□□□ -0.77
HERC4-210ENST00000480158 CLASP1Q7Z460 1538 aa10.22□□□□□ -0.77
HERC4-210ENST00000480158 FHOD3Q2V2M9 1422 aa10.21□□□□□ -0.77
HERC4-210ENST00000480158 ARHGAP35Q9NRY4 1499 aa10.21□□□□□ -0.77
HERC4-210ENST00000480158 ATP1B4Q9UN42 357 aaPredicted RBP10.2□□□□□ -0.78
HERC4-210ENST00000480158 ERCC6L2Q5T890 1561 aa10.19□□□□□ -0.78
HERC4-210ENST00000480158 DISP1Q96F81 1524 aa10.19□□□□□ -0.78
HERC4-210ENST00000480158 UGGT2Q9NYU1 1516 aa10.19□□□□□ -0.78
HERC4-210ENST00000480158 ARAP1Q96P48 1450 aa10.18□□□□□ -0.78
HERC4-210ENST00000480158 CARMIL2Q6F5E8 1435 aa10.18□□□□□ -0.78
HERC4-210ENST00000480158 ARID3CA6NKF2 412 aa10.17□□□□□ -0.78
HERC4-210ENST00000480158 SAMD9Q5K651 1589 aa10.16□□□□□ -0.78
HERC4-210ENST00000480158 KIAA0556O60303 1618 aa10.15□□□□□ -0.78
HERC4-210ENST00000480158 SHROOM2Q13796 1616 aa10.15□□□□□ -0.78
HERC4-210ENST00000480158 EFCAB5A4FU69 1503 aa10.15□□□□□ -0.78
HERC4-210ENST00000480158 PTPRGP23470 1445 aa10.13□□□□□ -0.79
HERC4-210ENST00000480158 PPARGC1BQ86YN6 1023 aaKnown RBP10.13□□□□□ -0.79
HERC4-210ENST00000480158 CYB5RLQ6IPT4 315 aa10.12□□□□□ -0.79
HERC4-210ENST00000480158 ARHGEF11O15085 1522 aa10.11□□□□□ -0.79
HERC4-210ENST00000480158 VPS8Q8N3P4 1428 aa10.1□□□□□ -0.79
HERC4-210ENST00000480158 PLB1Q6P1J6 1458 aa10.1□□□□□ -0.79
HERC4-210ENST00000480158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.1□□□□□ -0.79
HERC4-210ENST00000480158 HNRNPUL2Q1KMD3 747 aaKnown RBP10.1□□□□□ -0.79
HERC4-210ENST00000480158 FMN1Q68DA7 1419 aa10.1□□□□□ -0.79
HERC4-210ENST00000480158 PPP4R3CPQ6ZMV5 832 aa10.1□□□□□ -0.79
HERC4-210ENST00000480158 RIMBP3CA6NJZ7 1639 aa10.07□□□□□ -0.8
HERC4-210ENST00000480158 RIMBP3BA6NNM3 1639 aa10.07□□□□□ -0.8
HERC4-210ENST00000480158 RIMBP3Q9UFD9 1639 aa10.07□□□□□ -0.8
HERC4-210ENST00000480158 APLP2Q06481 763 aa10.07□□□□□ -0.8
HERC4-210ENST00000480158 PCF11O94913 1555 aaKnown RBP10.07□□□□□ -0.8
HERC4-210ENST00000480158 DNAJC5Q9H3Z4 198 aa10.06□□□□□ -0.8
HERC4-210ENST00000480158 CASKIN1Q8WXD9 1431 aa10.05□□□□□ -0.8
HERC4-210ENST00000480158 UACAQ9BZF9 1416 aa10.05□□□□□ -0.8
HERC4-210ENST00000480158 RAPGEF6Q8TEU7 1601 aa10.03□□□□□ -0.8
HERC4-210ENST00000480158 NUP153P49790 1475 aaKnown RBP10.03□□□□□ -0.8
HERC4-210ENST00000480158 FYCO1Q9BQS8 1478 aa10.02□□□□□ -0.81
HERC4-210ENST00000480158 KANK4Q5T7N3 995 aaPredicted RBP10.02□□□□□ -0.81
HERC4-210ENST00000480158 CDK13Q14004 1512 aaKnown RBP10.02□□□□□ -0.81
HERC4-210ENST00000480158 NCBP3Q53F19 620 aaKnown RBP10.02□□□□□ -0.81
HERC4-210ENST00000480158 ABCA8O94911 1581 aa10.02□□□□□ -0.81
HERC4-210ENST00000480158 EPRSP07814 1512 aaKnown RBP10□□□□□ -0.81
HERC4-210ENST00000480158 NPM1P06748 294 aaKnown RBP eCLIP10□□□□□ -0.81
HERC4-210ENST00000480158 HECW1Q76N89 1606 aa10□□□□□ -0.81
HERC4-210ENST00000480158 ABCC2Q92887 1545 aa10□□□□□ -0.81
HERC4-210ENST00000480158 ADCY10Q96PN6 1610 aa9.99□□□□□ -0.81
HERC4-210ENST00000480158 ATP10BO94823 1461 aa9.99□□□□□ -0.81
HERC4-210ENST00000480158 LRRIQ1Q96JM4 1722 aa9.98□□□□□ -0.81
HERC4-210ENST00000480158 KCNH8Q96L42 1107 aa9.98□□□□□ -0.81
HERC4-210ENST00000480158 PLEKHD1A6NEE1 506 aa9.97□□□□□ -0.81
HERC4-210ENST00000480158 MTUS2Q5JR59 1369 aa9.97□□□□□ -0.81
HERC4-210ENST00000480158 CDK11AQ9UQ88 783 aaPredicted RBP9.96□□□□□ -0.81
HERC4-210ENST00000480158 TIAM1Q13009 1591 aa9.96□□□□□ -0.82
HERC4-210ENST00000480158 UHRF1BP1LA0JNW5 1464 aa9.96□□□□□ -0.82
HERC4-210ENST00000480158 CCDC18Q5T9S5 1454 aa9.95□□□□□ -0.82
HERC4-210ENST00000480158 MAGI3Q5TCQ9 1506 aa9.94□□□□□ -0.82
HERC4-210ENST00000480158 KDM5BQ9UGL1 1544 aa9.94□□□□□ -0.82
HERC4-210ENST00000480158 ZCCHC11Q5TAX3 1644 aaKnown RBP9.94□□□□□ -0.82
HERC4-210ENST00000480158 LRRC9Q6ZRR7 1453 aa9.93□□□□□ -0.82
HERC4-210ENST00000480158 CFAP43Q8NDM7 1665 aa9.91□□□□□ -0.82
HERC4-210ENST00000480158 ASXL2Q76L83 1435 aa9.91□□□□□ -0.82
HERC4-210ENST00000480158 MAP3K1Q13233 1512 aa9.9□□□□□ -0.82
HERC4-210ENST00000480158 TROQ12816 1431 aaPredicted RBP9.89□□□□□ -0.83
HERC4-210ENST00000480158 NPM3O75607 178 aaKnown RBP9.89□□□□□ -0.83
HERC4-210ENST00000480158 WDR7Q9Y4E6 1490 aa9.88□□□□□ -0.83
HERC4-210ENST00000480158 EHBP1L1Q8N3D4 1523 aa9.87□□□□□ -0.83
HERC4-210ENST00000480158 KIF14Q15058 1648 aa9.87□□□□□ -0.83
HERC4-210ENST00000480158 NCOA2Q15596 1464 aa9.87□□□□□ -0.83
HERC4-210ENST00000480158 PHLDB1Q86UU1 1377 aa9.86□□□□□ -0.83
HERC4-210ENST00000480158 FAM69CQ0P6D2 419 aa9.86□□□□□ -0.83
HERC4-210ENST00000480158 ZNF777Q9ULD5 760 aaPredicted RBP9.86□□□□□ -0.83
HERC4-210ENST00000480158 CCNB3Q8WWL7 1395 aa9.85□□□□□ -0.83
HERC4-210ENST00000480158 TRHP20396 242 aaPredicted RBP9.85□□□□□ -0.83
HERC4-210ENST00000480158 PIAS4Q8N2W9 510 aaPredicted RBP9.84□□□□□ -0.83
HERC4-210ENST00000480158 SUPT6HQ7KZ85 1726 aaKnown RBP9.84□□□□□ -0.83
HERC4-210ENST00000480158 FAM50AQ14320 339 aaKnown RBP9.84□□□□□ -0.83
HERC4-210ENST00000480158 MAPKBP1O60336 1514 aa9.83□□□□□ -0.84
HERC4-210ENST00000480158 ITGAEP38570 1179 aa9.83□□□□□ -0.84
HERC4-210ENST00000480158 CFDP1Q9UEE9 299 aaPredicted RBP9.83□□□□□ -0.84
HERC4-210ENST00000480158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms