RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 TIAM1Q13009 1591 aa19.15■□□□□ 0.66
C9orf78-205ENST00000480023 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
C9orf78-205ENST00000480023 FANCIQ9NVI1 1328 aa19.12■□□□□ 0.65
C9orf78-205ENST00000480023 MSH5O43196 834 aa19.1■□□□□ 0.65
C9orf78-205ENST00000480023 CUX1P39880 1505 aa19.08■□□□□ 0.64
C9orf78-205ENST00000480023 ANP32CO43423 234 aa19.07■□□□□ 0.64
C9orf78-205ENST00000480023 ITGAEP38570 1179 aa19.06■□□□□ 0.64
C9orf78-205ENST00000480023 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
C9orf78-205ENST00000480023 LRRC9Q6ZRR7 1453 aa19.05■□□□□ 0.64
C9orf78-205ENST00000480023 TRIM52Q96A61 297 aa19.04■□□□□ 0.64
C9orf78-205ENST00000480023 SIN3AQ96ST3 1273 aa19.02■□□□□ 0.64
C9orf78-205ENST00000480023 CFAP43Q8NDM7 1665 aa19■□□□□ 0.63
C9orf78-205ENST00000480023 PHLDB1Q86UU1 1377 aa18.99■□□□□ 0.63
C9orf78-205ENST00000480023 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
C9orf78-205ENST00000480023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.96■□□□□ 0.63
C9orf78-205ENST00000480023 ERICH6BQ5W0A0 696 aa18.95■□□□□ 0.62
C9orf78-205ENST00000480023 CDK11AQ9UQ88 783 aaPredicted RBP18.93■□□□□ 0.62
C9orf78-205ENST00000480023 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
C9orf78-205ENST00000480023 HMGXB3Q12766 1538 aa18.9■□□□□ 0.62
C9orf78-205ENST00000480023 ERICH6Q7L0X2 663 aa18.86■□□□□ 0.61
C9orf78-205ENST00000480023 HIRIP3Q9BW71 556 aaPredicted RBP18.86■□□□□ 0.61
C9orf78-205ENST00000480023 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
C9orf78-205ENST00000480023 IGF1RP08069 1367 aa18.86■□□□□ 0.61
C9orf78-205ENST00000480023 CFTRP13569 1480 aa18.85■□□□□ 0.61
C9orf78-205ENST00000480023 FAM50AQ14320 339 aaKnown RBP18.85■□□□□ 0.61
C9orf78-205ENST00000480023 TONSLQ96HA7 1378 aa18.84■□□□□ 0.61
C9orf78-205ENST00000480023 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
C9orf78-205ENST00000480023 HNRNPUQ00839 825 aaKnown RBP eCLIP18.8■□□□□ 0.6
C9orf78-205ENST00000480023 PPP4R2Q9NY27 417 aa18.8■□□□□ 0.6
C9orf78-205ENST00000480023 KDM5BQ9UGL1 1544 aa18.8■□□□□ 0.6
C9orf78-205ENST00000480023 UACAQ9BZF9 1416 aa18.79■□□□□ 0.6
C9orf78-205ENST00000480023 FYCO1Q9BQS8 1478 aa18.79■□□□□ 0.6
C9orf78-205ENST00000480023 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
C9orf78-205ENST00000480023 CCDC18Q5T9S5 1454 aa18.77■□□□□ 0.6
C9orf78-205ENST00000480023 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.61e-7■■■■■ 31.5
C9orf78-205ENST00000480023 CARMIL1Q5VZK9 1371 aa18.77■□□□□ 0.59
C9orf78-205ENST00000480023 HFM1A2PYH4 1435 aa18.76■□□□□ 0.59
C9orf78-205ENST00000480023 NCOA2Q15596 1464 aa18.74■□□□□ 0.59
C9orf78-205ENST00000480023 PTPN23Q9H3S7 1636 aa18.73■□□□□ 0.59
C9orf78-205ENST00000480023 FGD5Q6ZNL6 1462 aa18.73■□□□□ 0.59
C9orf78-205ENST00000480023 FGD6Q6ZV73 1430 aa18.73■□□□□ 0.59
C9orf78-205ENST00000480023 CASKIN1Q8WXD9 1431 aa18.73■□□□□ 0.59
C9orf78-205ENST00000480023 EFCAB5A4FU69 1503 aa18.72■□□□□ 0.59
C9orf78-205ENST00000480023 IRX6P78412 446 aaPredicted RBP18.72■□□□□ 0.59
C9orf78-205ENST00000480023 DEKP35659 375 aaKnown RBP18.7■□□□□ 0.58
C9orf78-205ENST00000480023 WASHC2AQ641Q2 1341 aa18.67■□□□□ 0.58
C9orf78-205ENST00000480023 CNTLNQ9NXG0 1405 aa18.66■□□□□ 0.58
C9orf78-205ENST00000480023 NAIPQ13075 1403 aa18.64■□□□□ 0.58
C9orf78-205ENST00000480023 PTPRKQ15262 1439 aa18.64■□□□□ 0.58
C9orf78-205ENST00000480023 ZBED9Q6R2W3 1325 aa18.64■□□□□ 0.57
C9orf78-205ENST00000480023 FHOD3Q2V2M9 1422 aa18.62■□□□□ 0.57
C9orf78-205ENST00000480023 NOP58Q9Y2X3 529 aaKnown RBP18.62■□□□□ 0.57
C9orf78-205ENST00000480023 FMN1Q68DA7 1419 aa18.59■□□□□ 0.57
C9orf78-205ENST00000480023 HSPA5P11021 654 aaKnown RBP18.59■□□□□ 0.57
C9orf78-205ENST00000480023 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.57
C9orf78-205ENST00000480023 HECW1Q76N89 1606 aa18.58■□□□□ 0.56
C9orf78-205ENST00000480023 B4GALNT3Q6L9W6 998 aa18.57■□□□□ 0.56
C9orf78-205ENST00000480023 NCOA1Q15788 1441 aa18.56■□□□□ 0.56
C9orf78-205ENST00000480023 PRKRIP1Q9H875 184 aaPredicted RBP18.55■□□□□ 0.56
C9orf78-205ENST00000480023 CCDC184Q52MB2 194 aa18.55■□□□□ 0.56
C9orf78-205ENST00000480023 CTTNBP2Q8WZ74 1663 aa18.54■□□□□ 0.56
C9orf78-205ENST00000480023 MYOM3Q5VTT5 1437 aa18.54■□□□□ 0.56
C9orf78-205ENST00000480023 EIF4G2P78344 907 aaKnown RBP eCLIP18.54■□□□□ 0.56
C9orf78-205ENST00000480023 GCC2Q8IWJ2 1684 aa18.53■□□□□ 0.56
C9orf78-205ENST00000480023 DENND4BO75064 1496 aaPredicted RBP18.53■□□□□ 0.56
C9orf78-205ENST00000480023 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
C9orf78-205ENST00000480023 P3H3Q8IVL6 736 aa18.52■□□□□ 0.56
C9orf78-205ENST00000480023 CCDC7Q96M83 1385 aa18.52■□□□□ 0.55
C9orf78-205ENST00000480023 CC2D2AQ9P2K1 1620 aa18.52■□□□□ 0.55
C9orf78-205ENST00000480023 ATP1B4Q9UN42 357 aaPredicted RBP18.51■□□□□ 0.55
C9orf78-205ENST00000480023 POLR1AO95602 1720 aaPredicted RBP18.51■□□□□ 0.55
C9orf78-205ENST00000480023 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
C9orf78-205ENST00000480023 AKNAQ7Z591 1439 aa18.5■□□□□ 0.55
C9orf78-205ENST00000480023 PRKCSHP14314 528 aaPredicted RBP18.5■□□□□ 0.55
C9orf78-205ENST00000480023 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
C9orf78-205ENST00000480023 PAK3O75914 559 aaPredicted RBP18.5■□□□□ 0.55
C9orf78-205ENST00000480023 CUL7Q14999 1698 aa18.5■□□□□ 0.55
C9orf78-205ENST00000480023 SMG6Q86US8 1419 aaKnown RBP18.49■□□□□ 0.55
C9orf78-205ENST00000480023 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
C9orf78-205ENST00000480023 RNF123Q5XPI4 1314 aa18.49■□□□□ 0.55
C9orf78-205ENST00000480023 LRRIQ1Q96JM4 1722 aa18.48■□□□□ 0.55
C9orf78-205ENST00000480023 MRS2Q9HD23 443 aa18.47■□□□□ 0.55
C9orf78-205ENST00000480023 CADPSQ9ULU8 1353 aa18.47■□□□□ 0.55
C9orf78-205ENST00000480023 ARHGEF11O15085 1522 aa18.47■□□□□ 0.55
C9orf78-205ENST00000480023 EHBP1L1Q8N3D4 1523 aa18.47■□□□□ 0.55
C9orf78-205ENST00000480023 IPO9Q96P70 1041 aaKnown RBP18.46■□□□□ 0.55
C9orf78-205ENST00000480023 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
C9orf78-205ENST00000480023 FAM9BQ8IZU0 186 aa18.45■□□□□ 0.54
C9orf78-205ENST00000480023 TCOF1Q13428 1488 aaKnown RBP18.45■□□□□ 0.54
C9orf78-205ENST00000480023 SAMD9Q5K651 1589 aa18.45■□□□□ 0.54
C9orf78-205ENST00000480023 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
C9orf78-205ENST00000480023 GRIN2BQ13224 1484 aa18.43■□□□□ 0.54
C9orf78-205ENST00000480023 NBR1Q14596 966 aa18.43■□□□□ 0.54
C9orf78-205ENST00000480023 ANP32AP39687 249 aaKnown RBP18.43■□□□□ 0.54
C9orf78-205ENST00000480023 C11orf95C9JLR9 678 aaPredicted RBP18.42■□□□□ 0.54
C9orf78-205ENST00000480023 SPATA31E1Q6ZUB1 1445 aa18.41■□□□□ 0.54
C9orf78-205ENST00000480023 NUDCQ9Y266 331 aa18.38■□□□□ 0.53
C9orf78-205ENST00000480023 RTL5Q5HYW3 569 aaPredicted RBP18.37■□□□□ 0.53
C9orf78-205ENST00000480023 L3MBTL2Q969R5 705 aa18.37■□□□□ 0.53
C9orf78-205ENST00000480023 TEX14Q8IWB6 1497 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms