RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 CENPBP07199 599 aaPredicted RBP16.95■□□□□ 0.3
RAPGEF3-209ENST00000479866 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
RAPGEF3-209ENST00000479866 PRXQ9BXM0 1461 aa16.92■□□□□ 0.3
RAPGEF3-209ENST00000479866 FHOD3Q2V2M9 1422 aa16.91■□□□□ 0.3
RAPGEF3-209ENST00000479866 BIVM-ERCC5R4GMW8 1640 aa16.91■□□□□ 0.3
RAPGEF3-209ENST00000479866 MTUS2Q5JR59 1369 aa16.87■□□□□ 0.29
RAPGEF3-209ENST00000479866 KIF21BO75037 1637 aa16.87■□□□□ 0.29
RAPGEF3-209ENST00000479866 ZNF777Q9ULD5 760 aaPredicted RBP16.87■□□□□ 0.29
RAPGEF3-209ENST00000479866 ABCA10Q8WWZ4 1543 aa16.83■□□□□ 0.28
RAPGEF3-209ENST00000479866 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
RAPGEF3-209ENST00000479866 KIF21AQ7Z4S6 1674 aa16.79■□□□□ 0.28
RAPGEF3-209ENST00000479866 CHIC2Q9UKJ5 165 aa16.79■□□□□ 0.28
RAPGEF3-209ENST00000479866 MYT1LQ9UL68 1186 aa16.79■□□□□ 0.28
RAPGEF3-209ENST00000479866 ARAP1Q96P48 1450 aa16.79■□□□□ 0.28
RAPGEF3-209ENST00000479866 CDK11AQ9UQ88 783 aaPredicted RBP16.78■□□□□ 0.28
RAPGEF3-209ENST00000479866 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.28
RAPGEF3-209ENST00000479866 FHAD1B1AJZ9 1412 aa16.77■□□□□ 0.27
RAPGEF3-209ENST00000479866 JPH4Q96JJ6 628 aa16.76■□□□□ 0.27
RAPGEF3-209ENST00000479866 ARHGAP35Q9NRY4 1499 aa16.75■□□□□ 0.27
RAPGEF3-209ENST00000479866 GRIN2BQ13224 1484 aa16.75■□□□□ 0.27
RAPGEF3-209ENST00000479866 TRIM52Q96A61 297 aa16.75■□□□□ 0.27
RAPGEF3-209ENST00000479866 NEUROD1Q13562 356 aa16.74■□□□□ 0.27
RAPGEF3-209ENST00000479866 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
RAPGEF3-209ENST00000479866 KCNH8Q96L42 1107 aa16.71■□□□□ 0.27
RAPGEF3-209ENST00000479866 SNAPC4Q5SXM2 1469 aa16.7■□□□□ 0.26
RAPGEF3-209ENST00000479866 PRDM2Q13029 1718 aa16.66■□□□□ 0.26
RAPGEF3-209ENST00000479866 FMN1Q68DA7 1419 aa16.66■□□□□ 0.26
RAPGEF3-209ENST00000479866 PLEKHD1A6NEE1 506 aa16.65■□□□□ 0.26
RAPGEF3-209ENST00000479866 RRP7BPQ9NSQ0 103 aa16.65■□□□□ 0.26
RAPGEF3-209ENST00000479866 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
RAPGEF3-209ENST00000479866 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
RAPGEF3-209ENST00000479866 CARMIL2Q6F5E8 1435 aa16.59■□□□□ 0.25
RAPGEF3-209ENST00000479866 CFDP1Q9UEE9 299 aaPredicted RBP16.56■□□□□ 0.24
RAPGEF3-209ENST00000479866 GTF3C3Q9Y5Q9 886 aa16.56■□□□□ 0.24
RAPGEF3-209ENST00000479866 NPM1P06748 294 aaKnown RBP eCLIP16.54■□□□□ 0.24
RAPGEF3-209ENST00000479866 CUL7Q14999 1698 aa16.52■□□□□ 0.23
RAPGEF3-209ENST00000479866 WDR62O43379 1518 aa16.49■□□□□ 0.23
RAPGEF3-209ENST00000479866 PHLDB1Q86UU1 1377 aa16.49■□□□□ 0.23
RAPGEF3-209ENST00000479866 GRIN2AQ12879 1464 aa16.48■□□□□ 0.23
RAPGEF3-209ENST00000479866 PTPRGP23470 1445 aa16.47■□□□□ 0.23
RAPGEF3-209ENST00000479866 CASKIN1Q8WXD9 1431 aa16.46■□□□□ 0.22
RAPGEF3-209ENST00000479866 LRRC9Q6ZRR7 1453 aa16.45■□□□□ 0.22
RAPGEF3-209ENST00000479866 TSPY4P0CV99 314 aa16.45■□□□□ 0.22
RAPGEF3-209ENST00000479866 TSPY10P0CW01 314 aa16.45■□□□□ 0.22
RAPGEF3-209ENST00000479866 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
RAPGEF3-209ENST00000479866 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
RAPGEF3-209ENST00000479866 KIAA0586Q9BVV6 1533 aa16.44■□□□□ 0.22
RAPGEF3-209ENST00000479866 PRG4Q92954 1404 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF3-209ENST00000479866 IQGAP2Q13576 1575 aa16.43■□□□□ 0.22
RAPGEF3-209ENST00000479866 ABCA5Q8WWZ7 1642 aa16.42■□□□□ 0.22
RAPGEF3-209ENST00000479866 ZNF326Q5BKZ1 582 aaKnown RBP16.42■□□□□ 0.22
RAPGEF3-209ENST00000479866 SIN3AQ96ST3 1273 aa16.42■□□□□ 0.22
RAPGEF3-209ENST00000479866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.42■□□□□ 0.22
RAPGEF3-209ENST00000479866 EIF4G3O43432 1585 aaKnown RBP16.42■□□□□ 0.22
RAPGEF3-209ENST00000479866 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
RAPGEF3-209ENST00000479866 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
RAPGEF3-209ENST00000479866 EFCAB5A4FU69 1503 aa16.41■□□□□ 0.22
RAPGEF3-209ENST00000479866 ZNF644Q9H582 1327 aaPredicted RBP16.41■□□□□ 0.22
RAPGEF3-209ENST00000479866 DIEXFQ68CQ4 756 aaKnown RBP16.4■□□□□ 0.22
RAPGEF3-209ENST00000479866 YTHDC1Q96MU7 727 aaKnown RBP16.4■□□□□ 0.22
RAPGEF3-209ENST00000479866 PCF11O94913 1555 aaKnown RBP16.4■□□□□ 0.22
RAPGEF3-209ENST00000479866 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
RAPGEF3-209ENST00000479866 FYCO1Q9BQS8 1478 aa16.38■□□□□ 0.21
RAPGEF3-209ENST00000479866 POLR3GLQ9BT43 218 aa16.38■□□□□ 0.21
RAPGEF3-209ENST00000479866 CDK13Q14004 1512 aaKnown RBP16.36■□□□□ 0.21
RAPGEF3-209ENST00000479866 ADAMTS12P58397 1594 aa16.36■□□□□ 0.21
RAPGEF3-209ENST00000479866 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
RAPGEF3-209ENST00000479866 CNGB1Q14028 1251 aaPredicted RBP16.36■□□□□ 0.21
RAPGEF3-209ENST00000479866 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
RAPGEF3-209ENST00000479866 ZNF316A6NFI3 1004 aaPredicted RBP16.35■□□□□ 0.21
RAPGEF3-209ENST00000479866 HNRNPMP52272 730 aaKnown RBP eCLIP16.34■□□□□ 0.21
RAPGEF3-209ENST00000479866 HIRIP3Q9BW71 556 aaPredicted RBP16.34■□□□□ 0.21
RAPGEF3-209ENST00000479866 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
RAPGEF3-209ENST00000479866 SETD5Q9C0A6 1442 aa16.33■□□□□ 0.2
RAPGEF3-209ENST00000479866 FOXD1Q16676 465 aa16.33■□□□□ 0.2
RAPGEF3-209ENST00000479866 CYB5RLQ6IPT4 315 aa16.33■□□□□ 0.2
RAPGEF3-209ENST00000479866 CCDC18Q5T9S5 1454 aa16.33■□□□□ 0.2
RAPGEF3-209ENST00000479866 PBRM1Q86U86 1689 aa16.33■□□□□ 0.2
RAPGEF3-209ENST00000479866 NCOA2Q15596 1464 aa16.32■□□□□ 0.2
RAPGEF3-209ENST00000479866 THOC2Q8NI27 1593 aaKnown RBP16.31■□□□□ 0.2
RAPGEF3-209ENST00000479866 FGD6Q6ZV73 1430 aa16.3■□□□□ 0.2
RAPGEF3-209ENST00000479866 TONSLQ96HA7 1378 aa16.29■□□□□ 0.2
RAPGEF3-209ENST00000479866 ACIN1Q9UKV3 1341 aaKnown RBP16.29■□□□□ 0.2
RAPGEF3-209ENST00000479866 CTTNBP2Q8WZ74 1663 aa16.29■□□□□ 0.2
RAPGEF3-209ENST00000479866 EPRSP07814 1512 aaKnown RBP16.28■□□□□ 0.2
RAPGEF3-209ENST00000479866 MYOM3Q5VTT5 1437 aa16.26■□□□□ 0.19
RAPGEF3-209ENST00000479866 RRBP1Q9P2E9 1410 aaKnown RBP16.26■□□□□ 0.19
RAPGEF3-209ENST00000479866 WDR97A6NE52 1622 aa16.24■□□□□ 0.19
RAPGEF3-209ENST00000479866 DHX57Q6P158 1386 aaKnown RBP16.23■□□□□ 0.19
RAPGEF3-209ENST00000479866 DAXXQ9UER7 740 aaPredicted RBP16.23■□□□□ 0.19
RAPGEF3-209ENST00000479866 ANP32EQ9BTT0 268 aa16.22■□□□□ 0.19
RAPGEF3-209ENST00000479866 PLEKHG5O94827 1062 aa16.2■□□□□ 0.18
RAPGEF3-209ENST00000479866 KDM2AQ9Y2K7 1162 aa16.2■□□□□ 0.18
RAPGEF3-209ENST00000479866 HECW1Q76N89 1606 aa16.19■□□□□ 0.18
RAPGEF3-209ENST00000479866 DISP1Q96F81 1524 aa16.18■□□□□ 0.18
RAPGEF3-209ENST00000479866 EFCAB2Q5VUJ9 269 aa16.18■□□□□ 0.18
RAPGEF3-209ENST00000479866 CEP170Q5SW79 1584 aa16.18■□□□□ 0.18
RAPGEF3-209ENST00000479866 NUP160Q12769 1436 aa16.17■□□□□ 0.18
RAPGEF3-209ENST00000479866 UGGT2Q9NYU1 1516 aa16.16■□□□□ 0.18
RAPGEF3-209ENST00000479866 RGL3Q3MIN7 710 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms