RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 ITGAEP38570 1179 aa18.33■□□□□ 0.53
LYSMD4-206ENST00000479791 PABPN1Q86U42 306 aaKnown RBP eCLIP18.33■□□□□ 0.52
LYSMD4-206ENST00000479791 KIF27Q86VH2 1401 aa18.32■□□□□ 0.52
LYSMD4-206ENST00000479791 ANP32CO43423 234 aa18.3■□□□□ 0.52
LYSMD4-206ENST00000479791 TIAM1Q13009 1591 aa18.28■□□□□ 0.52
LYSMD4-206ENST00000479791 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
LYSMD4-206ENST00000479791 TRIM52Q96A61 297 aa18.26■□□□□ 0.51
LYSMD4-206ENST00000479791 MSH5O43196 834 aa18.26■□□□□ 0.51
LYSMD4-206ENST00000479791 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
LYSMD4-206ENST00000479791 CUX1P39880 1505 aa18.23■□□□□ 0.51
LYSMD4-206ENST00000479791 LRRC9Q6ZRR7 1453 aa18.21■□□□□ 0.51
LYSMD4-206ENST00000479791 PHLDB1Q86UU1 1377 aa18.18■□□□□ 0.5
LYSMD4-206ENST00000479791 CDK11AQ9UQ88 783 aaPredicted RBP18.16■□□□□ 0.5
LYSMD4-206ENST00000479791 MYT1LQ9UL68 1186 aa18.15■□□□□ 0.5
LYSMD4-206ENST00000479791 ERICH6BQ5W0A0 696 aa18.14■□□□□ 0.49
LYSMD4-206ENST00000479791 HIRIP3Q9BW71 556 aaPredicted RBP18.12■□□□□ 0.49
LYSMD4-206ENST00000479791 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.12■□□□□ 0.49
LYSMD4-206ENST00000479791 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
LYSMD4-206ENST00000479791 ERICH6Q7L0X2 663 aa18.11■□□□□ 0.49
LYSMD4-206ENST00000479791 FHAD1B1AJZ9 1412 aa18.1■□□□□ 0.49
LYSMD4-206ENST00000479791 CFAP43Q8NDM7 1665 aa18.1■□□□□ 0.49
LYSMD4-206ENST00000479791 IGF1RP08069 1367 aa18.06■□□□□ 0.48
LYSMD4-206ENST00000479791 TONSLQ96HA7 1378 aa18.06■□□□□ 0.48
LYSMD4-206ENST00000479791 HNRNPUQ00839 825 aaKnown RBP eCLIP18.04■□□□□ 0.48
LYSMD4-206ENST00000479791 HMGXB3Q12766 1538 aa18.04■□□□□ 0.48
LYSMD4-206ENST00000479791 CFTRP13569 1480 aa18.03■□□□□ 0.48
LYSMD4-206ENST00000479791 PPP4R2Q9NY27 417 aa18.01■□□□□ 0.47
LYSMD4-206ENST00000479791 NCAPD3P42695 1498 aa18■□□□□ 0.47
LYSMD4-206ENST00000479791 PCF11O94913 1555 aaKnown RBP18■□□□□ 0.47
LYSMD4-206ENST00000479791 CARMIL1Q5VZK9 1371 aa17.99■□□□□ 0.47
LYSMD4-206ENST00000479791 UACAQ9BZF9 1416 aa17.97■□□□□ 0.47
LYSMD4-206ENST00000479791 IRX6P78412 446 aaPredicted RBP17.96■□□□□ 0.47
LYSMD4-206ENST00000479791 CCDC18Q5T9S5 1454 aa17.95■□□□□ 0.46
LYSMD4-206ENST00000479791 FYCO1Q9BQS8 1478 aa17.95■□□□□ 0.46
LYSMD4-206ENST00000479791 HFM1A2PYH4 1435 aa17.94■□□□□ 0.46
LYSMD4-206ENST00000479791 AQRO60306 1485 aaKnown RBP eCLIP17.92■□□□□ 0.46
LYSMD4-206ENST00000479791 KDM5BQ9UGL1 1544 aa17.91■□□□□ 0.46
LYSMD4-206ENST00000479791 FGD6Q6ZV73 1430 aa17.91■□□□□ 0.46
LYSMD4-206ENST00000479791 CASKIN1Q8WXD9 1431 aa17.91■□□□□ 0.46
LYSMD4-206ENST00000479791 FGD5Q6ZNL6 1462 aa17.9■□□□□ 0.46
LYSMD4-206ENST00000479791 DEKP35659 375 aaKnown RBP17.9■□□□□ 0.46
LYSMD4-206ENST00000479791 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
LYSMD4-206ENST00000479791 PTPN23Q9H3S7 1636 aa17.88■□□□□ 0.45
LYSMD4-206ENST00000479791 NCOA2Q15596 1464 aa17.87■□□□□ 0.45
LYSMD4-206ENST00000479791 WASHC2AQ641Q2 1341 aa17.87■□□□□ 0.45
LYSMD4-206ENST00000479791 EFCAB5A4FU69 1503 aa17.87■□□□□ 0.45
LYSMD4-206ENST00000479791 ATP1B4Q9UN42 357 aaPredicted RBP17.84■□□□□ 0.45
LYSMD4-206ENST00000479791 CNTLNQ9NXG0 1405 aa17.84■□□□□ 0.45
LYSMD4-206ENST00000479791 NAIPQ13075 1403 aa17.83■□□□□ 0.45
LYSMD4-206ENST00000479791 FHOD3Q2V2M9 1422 aa17.83■□□□□ 0.45
LYSMD4-206ENST00000479791 ZBED9Q6R2W3 1325 aa17.83■□□□□ 0.45
LYSMD4-206ENST00000479791 PTPRKQ15262 1439 aa17.83■□□□□ 0.44
LYSMD4-206ENST00000479791 NOP58Q9Y2X3 529 aaKnown RBP17.83■□□□□ 0.44
LYSMD4-206ENST00000479791 HSPA5P11021 654 aaKnown RBP17.82■□□□□ 0.44
LYSMD4-206ENST00000479791 P3H3Q8IVL6 736 aa17.82■□□□□ 0.44
LYSMD4-206ENST00000479791 B4GALNT3Q6L9W6 998 aa17.8■□□□□ 0.44
LYSMD4-206ENST00000479791 FMN1Q68DA7 1419 aa17.79■□□□□ 0.44
LYSMD4-206ENST00000479791 EIF4G2P78344 907 aaKnown RBP eCLIP17.79■□□□□ 0.44
LYSMD4-206ENST00000479791 PRKRIP1Q9H875 184 aaPredicted RBP17.77■□□□□ 0.44
LYSMD4-206ENST00000479791 CCDC184Q52MB2 194 aa17.77■□□□□ 0.44
LYSMD4-206ENST00000479791 MTUS2Q5JR59 1369 aa17.75■□□□□ 0.43
LYSMD4-206ENST00000479791 NCOA1Q15788 1441 aa17.74■□□□□ 0.43
LYSMD4-206ENST00000479791 MYOM3Q5VTT5 1437 aa17.74■□□□□ 0.43
LYSMD4-206ENST00000479791 SNAPC4Q5SXM2 1469 aa17.74■□□□□ 0.43
LYSMD4-206ENST00000479791 FAM9BQ8IZU0 186 aa17.72■□□□□ 0.43
LYSMD4-206ENST00000479791 MRS2Q9HD23 443 aa17.72■□□□□ 0.43
LYSMD4-206ENST00000479791 CCDC7Q96M83 1385 aa17.72■□□□□ 0.43
LYSMD4-206ENST00000479791 HECW1Q76N89 1606 aa17.71■□□□□ 0.42
LYSMD4-206ENST00000479791 PAK3O75914 559 aaPredicted RBP17.7■□□□□ 0.42
LYSMD4-206ENST00000479791 CADPSQ9ULU8 1353 aa17.7■□□□□ 0.42
LYSMD4-206ENST00000479791 CTTNBP2Q8WZ74 1663 aa17.68■□□□□ 0.42
LYSMD4-206ENST00000479791 SMG6Q86US8 1419 aaKnown RBP17.68■□□□□ 0.42
LYSMD4-206ENST00000479791 NBR1Q14596 966 aa17.68■□□□□ 0.42
LYSMD4-206ENST00000479791 DENND4BO75064 1496 aaPredicted RBP17.68■□□□□ 0.42
LYSMD4-206ENST00000479791 IPO9Q96P70 1041 aaKnown RBP17.67■□□□□ 0.42
LYSMD4-206ENST00000479791 CC2D2AQ9P2K1 1620 aa17.67■□□□□ 0.42
LYSMD4-206ENST00000479791 ANP32AP39687 249 aaKnown RBP17.66■□□□□ 0.42
LYSMD4-206ENST00000479791 RNF123Q5XPI4 1314 aa17.66■□□□□ 0.42
LYSMD4-206ENST00000479791 GCC2Q8IWJ2 1684 aa17.66■□□□□ 0.42
LYSMD4-206ENST00000479791 SUPT6HQ7KZ85 1726 aaKnown RBP17.66■□□□□ 0.42
LYSMD4-206ENST00000479791 AKNAQ7Z591 1439 aa17.66■□□□□ 0.42
LYSMD4-206ENST00000479791 C11orf95C9JLR9 678 aaPredicted RBP17.66■□□□□ 0.42
LYSMD4-206ENST00000479791 CUL7Q14999 1698 aa17.66■□□□□ 0.42
LYSMD4-206ENST00000479791 THOC2Q8NI27 1593 aaKnown RBP17.65■□□□□ 0.42
LYSMD4-206ENST00000479791 ABCA5Q8WWZ7 1642 aa17.64■□□□□ 0.41
LYSMD4-206ENST00000479791 EHBP1L1Q8N3D4 1523 aa17.64■□□□□ 0.41
LYSMD4-206ENST00000479791 ABCA10Q8WWZ4 1543 aa17.64■□□□□ 0.41
LYSMD4-206ENST00000479791 PRKCSHP14314 528 aaPredicted RBP17.64■□□□□ 0.41
LYSMD4-206ENST00000479791 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
LYSMD4-206ENST00000479791 RTL5Q5HYW3 569 aaPredicted RBP17.61■□□□□ 0.41
LYSMD4-206ENST00000479791 L3MBTL2Q969R5 705 aa17.61■□□□□ 0.41
LYSMD4-206ENST00000479791 GRIN2BQ13224 1484 aa17.61■□□□□ 0.41
LYSMD4-206ENST00000479791 TCOF1Q13428 1488 aaKnown RBP17.61■□□□□ 0.41
LYSMD4-206ENST00000479791 POLR1AO95602 1720 aaPredicted RBP17.61■□□□□ 0.41
LYSMD4-206ENST00000479791 LRRIQ1Q96JM4 1722 aa17.61■□□□□ 0.41
LYSMD4-206ENST00000479791 UGGT2Q9NYU1 1516 aa17.61■□□□□ 0.41
LYSMD4-206ENST00000479791 ZBTB47Q9UFB7 747 aaPredicted RBP17.61■□□□□ 0.41
LYSMD4-206ENST00000479791 NUDCQ9Y266 331 aa17.6■□□□□ 0.41
LYSMD4-206ENST00000479791 CCDC136Q96JN2 1154 aa17.6■□□□□ 0.41
LYSMD4-206ENST00000479791 SAMD9Q5K651 1589 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms