RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 PPP1R15AO75807 674 aaPredicted RBP29.3■■■□□ 2.28
COL13A1-208ENST00000479733 KIF27Q86VH2 1401 aa29.27■■■□□ 2.28
COL13A1-208ENST00000479733 SETD5Q9C0A6 1442 aa29.26■■■□□ 2.28
COL13A1-208ENST00000479733 ANP32CO43423 234 aa29.25■■■□□ 2.27
COL13A1-208ENST00000479733 ATP1B4Q9UN42 357 aaPredicted RBP29.25■■■□□ 2.27
COL13A1-208ENST00000479733 BIVM-ERCC5R4GMW8 1640 aa29.22■■■□□ 2.27
COL13A1-208ENST00000479733 CUX1P39880 1505 aa29.16■■■□□ 2.26
COL13A1-208ENST00000479733 P3H3Q8IVL6 736 aa29.15■■■□□ 2.26
COL13A1-208ENST00000479733 PHLDB1Q86UU1 1377 aa29.14■■■□□ 2.26
COL13A1-208ENST00000479733 IRX6P78412 446 aaPredicted RBP29.12■■■□□ 2.25
COL13A1-208ENST00000479733 CCER2I3L3R5 266 aa29.12■■■□□ 2.25
COL13A1-208ENST00000479733 MSH5O43196 834 aa29.1■■■□□ 2.25
COL13A1-208ENST00000479733 TIAM1Q13009 1591 aa29.02■■■□□ 2.24
COL13A1-208ENST00000479733 LRRC9Q6ZRR7 1453 aa29.01■■■□□ 2.23
COL13A1-208ENST00000479733 HNRNPUQ00839 825 aaKnown RBP eCLIP28.99■■■□□ 2.23
COL13A1-208ENST00000479733 TIMELESSQ9UNS1 1208 aa28.97■■■□□ 2.23
COL13A1-208ENST00000479733 NCAPD3P42695 1498 aa28.95■■■□□ 2.22
COL13A1-208ENST00000479733 IGF1RP08069 1367 aa28.95■■■□□ 2.22
COL13A1-208ENST00000479733 TONSLQ96HA7 1378 aa28.93■■■□□ 2.22
COL13A1-208ENST00000479733 ERICH6Q7L0X2 663 aa28.91■■■□□ 2.22
COL13A1-208ENST00000479733 CDK11AQ9UQ88 783 aaPredicted RBP28.91■■■□□ 2.22
COL13A1-208ENST00000479733 HMGXB3Q12766 1538 aa28.89■■■□□ 2.21
COL13A1-208ENST00000479733 CARMIL1Q5VZK9 1371 aa28.88■■■□□ 2.21
COL13A1-208ENST00000479733 MAP3K1Q13233 1512 aa28.83■■■□□ 2.21
COL13A1-208ENST00000479733 FHAD1B1AJZ9 1412 aa28.76■■■□□ 2.2
COL13A1-208ENST00000479733 FANCIQ9NVI1 1328 aa28.76■■■□□ 2.19
COL13A1-208ENST00000479733 CFTRP13569 1480 aa28.74■■■□□ 2.19
COL13A1-208ENST00000479733 FHOD3Q2V2M9 1422 aa28.73■■■□□ 2.19
COL13A1-208ENST00000479733 PCF11O94913 1555 aaKnown RBP28.71■■■□□ 2.19
COL13A1-208ENST00000479733 CC2D2AQ9P2K1 1620 aa28.68■■■□□ 2.18
COL13A1-208ENST00000479733 CCDC184Q52MB2 194 aa28.66■■■□□ 2.18
COL13A1-208ENST00000479733 CCDC18Q5T9S5 1454 aa28.64■■■□□ 2.18
COL13A1-208ENST00000479733 B4GALNT3Q6L9W6 998 aa28.63■■■□□ 2.17
COL13A1-208ENST00000479733 FAM9BQ8IZU0 186 aa28.62■■■□□ 2.17
COL13A1-208ENST00000479733 WASHC2AQ641Q2 1341 aa28.62■■■□□ 2.17
COL13A1-208ENST00000479733 HSPA5P11021 654 aaKnown RBP28.62■■■□□ 2.17
COL13A1-208ENST00000479733 PPP4R2Q9NY27 417 aa28.6■■■□□ 2.17
COL13A1-208ENST00000479733 PTPRKQ15262 1439 aa28.58■■■□□ 2.17
COL13A1-208ENST00000479733 FGD5Q6ZNL6 1462 aa28.57■■■□□ 2.16
COL13A1-208ENST00000479733 CFAP43Q8NDM7 1665 aa28.57■■■□□ 2.16
COL13A1-208ENST00000479733 FGD6Q6ZV73 1430 aa28.57■■■□□ 2.16
COL13A1-208ENST00000479733 UACAQ9BZF9 1416 aa28.55■■■□□ 2.16
COL13A1-208ENST00000479733 MTUS2Q5JR59 1369 aa28.53■■■□□ 2.16
COL13A1-208ENST00000479733 RRP7BPQ9NSQ0 103 aa28.52■■■□□ 2.16
COL13A1-208ENST00000479733 CHIC2Q9UKJ5 165 aa28.52■■■□□ 2.16
COL13A1-208ENST00000479733 AQRO60306 1485 aaKnown RBP eCLIP28.51■■■□□ 2.15
COL13A1-208ENST00000479733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.5■■■□□ 2.15
COL13A1-208ENST00000479733 CNGB1Q14028 1251 aaPredicted RBP28.48■■■□□ 2.15
COL13A1-208ENST00000479733 HFM1A2PYH4 1435 aa28.47■■■□□ 2.15
COL13A1-208ENST00000479733 MRS2Q9HD23 443 aa28.47■■■□□ 2.15
COL13A1-208ENST00000479733 CASKIN1Q8WXD9 1431 aa28.47■■■□□ 2.15
COL13A1-208ENST00000479733 FYCO1Q9BQS8 1478 aa28.47■■■□□ 2.15
COL13A1-208ENST00000479733 EIF4G2P78344 907 aaKnown RBP eCLIP28.46■■■□□ 2.15
COL13A1-208ENST00000479733 DEKP35659 375 aaKnown RBP28.45■■■□□ 2.15
COL13A1-208ENST00000479733 NBR1Q14596 966 aa28.44■■■□□ 2.14
COL13A1-208ENST00000479733 NAIPQ13075 1403 aa28.44■■■□□ 2.14
COL13A1-208ENST00000479733 C11orf95C9JLR9 678 aaPredicted RBP28.43■■■□□ 2.14
COL13A1-208ENST00000479733 ERICH6BQ5W0A0 696 aa28.43■■■□□ 2.14
COL13A1-208ENST00000479733 PTPN23Q9H3S7 1636 aa28.41■■■□□ 2.14
COL13A1-208ENST00000479733 PRKRIP1Q9H875 184 aaPredicted RBP28.39■■■□□ 2.14
COL13A1-208ENST00000479733 FOXD1Q16676 465 aa28.39■■■□□ 2.14
COL13A1-208ENST00000479733 CADPSQ9ULU8 1353 aa28.38■■■□□ 2.13
COL13A1-208ENST00000479733 KDM5BQ9UGL1 1544 aa28.38■■■□□ 2.13
COL13A1-208ENST00000479733 SENP3-EIF4A1A0A087X0R7 540 aa28.36■■■□□ 2.13
COL13A1-208ENST00000479733 RAD54L2Q9Y4B4 1467 aa28.35■■■□□ 2.13
COL13A1-208ENST00000479733 FMN1Q68DA7 1419 aa28.34■■■□□ 2.13
COL13A1-208ENST00000479733 PAK3O75914 559 aaPredicted RBP28.33■■■□□ 2.13
COL13A1-208ENST00000479733 L3MBTL2Q969R5 705 aa28.33■■■□□ 2.13
COL13A1-208ENST00000479733 CNTLNQ9NXG0 1405 aa28.33■■■□□ 2.13
COL13A1-208ENST00000479733 NOP58Q9Y2X3 529 aaKnown RBP28.31■■■□□ 2.12
COL13A1-208ENST00000479733 ZBED9Q6R2W3 1325 aa28.29■■■□□ 2.12
COL13A1-208ENST00000479733 NCOA2Q15596 1464 aa28.28■■■□□ 2.12
COL13A1-208ENST00000479733 MYOM3Q5VTT5 1437 aa28.27■■■□□ 2.12
COL13A1-208ENST00000479733 EFCAB5A4FU69 1503 aa28.25■■■□□ 2.11
COL13A1-208ENST00000479733 MYT1LQ9UL68 1186 aa28.25■■■□□ 2.11
COL13A1-208ENST00000479733 CCDC7Q96M83 1385 aa28.25■■■□□ 2.11
COL13A1-208ENST00000479733 PRDM2Q13029 1718 aa28.23■■■□□ 2.11
COL13A1-208ENST00000479733 MPHOSPH9Q99550 1183 aa28.23■■■□□ 2.11
COL13A1-208ENST00000479733 DNAJC5BQ9UF47 199 aa28.23■■■□□ 2.11
COL13A1-208ENST00000479733 POLR3GLQ9BT43 218 aa28.22■■■□□ 2.11
COL13A1-208ENST00000479733 SNAPC4Q5SXM2 1469 aa28.21■■■□□ 2.11
COL13A1-208ENST00000479733 ARID3CA6NKF2 412 aa28.2■■■□□ 2.1
COL13A1-208ENST00000479733 NBPF8Q3BBV2 869 aa28.18■■■□□ 2.1
COL13A1-208ENST00000479733 AKNAQ7Z591 1439 aa28.17■■■□□ 2.1
COL13A1-208ENST00000479733 DENND4BO75064 1496 aaPredicted RBP28.17■■■□□ 2.1
COL13A1-208ENST00000479733 NESP48681 1621 aa28.17■■■□□ 2.1
COL13A1-208ENST00000479733 CCDC136Q96JN2 1154 aa28.17■■■□□ 2.1
COL13A1-208ENST00000479733 NCOA1Q15788 1441 aa28.15■■■□□ 2.1
COL13A1-208ENST00000479733 KIF7Q2M1P5 1343 aa28.15■■■□□ 2.1
COL13A1-208ENST00000479733 FANCD2Q9BXW9 1451 aa28.14■■■□□ 2.09
COL13A1-208ENST00000479733 ANP32AP39687 249 aaKnown RBP28.09■■■□□ 2.09
COL13A1-208ENST00000479733 POLA1P09884 1462 aaPredicted RBP28.09■■■□□ 2.09
COL13A1-208ENST00000479733 ABCA10Q8WWZ4 1543 aa28.07■■■□□ 2.08
COL13A1-208ENST00000479733 KDM6BO15054 1643 aa28.07■■■□□ 2.08
COL13A1-208ENST00000479733 IPO9Q96P70 1041 aaKnown RBP28.04■■■□□ 2.08
COL13A1-208ENST00000479733 TDRD9Q8NDG6 1382 aaKnown RBP28.04■■■□□ 2.08
COL13A1-208ENST00000479733 LRRIQ1Q96JM4 1722 aa28.03■■■□□ 2.08
COL13A1-208ENST00000479733 ZNF326Q5BKZ1 582 aaKnown RBP28.03■■■□□ 2.08
COL13A1-208ENST00000479733 SUPT6HQ7KZ85 1726 aaKnown RBP28.03■■■□□ 2.08
COL13A1-208ENST00000479733 ZBTB47Q9UFB7 747 aaPredicted RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms